Latilactobacillus sakei subsp. sakei: LCA_1406
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Entry
LCA_1406 CDS
T00299
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Pathway
lsa03030
DNA replication
lsa03410
Base excision repair
lsa03420
Nucleotide excision repair
lsa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCA_1406 (polA)
03410 Base excision repair
LCA_1406 (polA)
03420 Nucleotide excision repair
LCA_1406 (polA)
03440 Homologous recombination
LCA_1406 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsa03032
]
LCA_1406 (polA)
03400 DNA repair and recombination proteins [BR:
lsa03400
]
LCA_1406 (polA)
Enzymes [BR:
lsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCA_1406 (polA)
DNA replication proteins [BR:
lsa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LCA_1406 (polA)
DNA repair and recombination proteins [BR:
lsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LCA_1406 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCA_1406 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAI55709
UniProt:
Q38VS4
LinkDB
All DBs
Position
complement(1371955..1374615)
Genome browser
AA seq
886 aa
AA seq
DB search
MGSQKSLLLIDGNSVAFRAFYAMHQVLDSFTNQDGLHTNAIYAFKNMLDIILKRFEPTHV
LVAFDAGKTTFRTAQFADYKGGRSKTPPELTEQFPYIKELLHAYGIQTAELANYEADDII
GTLASQAEQDGFVVNIVTGDRDLTQLTTDKTTVNITVKGVNDTEAYTPEHVQEKLGLAPS
QIVDLKGLMGDTSDNYPGVTKVGEKTALKLLTEFGSIEGVYENVDAMKKSKMKEHLIEDR
DQAFMSKKLATILRDAPIETTLADITYEGPNIDTLIAFYQEMNFQNFLKQLNVTPEAVEP
AENYQYTVLTLDNLETVQAIKTPVAFGVEMLTDNYHTADLIGFYIGAPDHWYVSDDVALL
AEPVLKDWLEDASHPKAVFGVKRTQVAANRLGVHLAGVDFDLLLASYLLNTTNNSNDLGT
VANLHEYQNVQTDEAVYGKGAKRAVPTEPALLYQHLVQKAAAIYHLQPQLEEQLKEHQQF
DLFTDMELPLALVLAQMEITGIRVDASRLQQMGSEFSQTLKILEEKVYAEAGETFNINSP
KQLGVILFEKMGLPVVKKTKTGYSTAVDVLEQLRKDAPIVQTILDYRQIAKIQSTYVEGL
LKSIHQDNKVHTRYLQTLTQTGRLSSVDPNLQNIPVRLAEGRKIRQAFVPSHPDWQMFAS
DYSQIELRVLAHISGDANMQEAFKEDRDIHANTAMKIFGLNSADEVTPDMRRQAKATNFG
IVYGISDYGLSQNIGISRQEAKRFIDAYFEQYPGVQQFMVDIVKKAREEGYVETLFHRRR
YLPDIHAKNFNLRSFAERTAMNTPIQGSAADIIKVAMILMQQELKKANLQARMLLQVHDE
LIFEAPTEEIPILQKLVPSVMDSAVKLAVPLKVESGFGPTWYDIKK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgggttctcaaaaaagtttattattaattgatggtaacagtgtagcgtttcgggcgttt
tacgcgatgcaccaagtgttagatagttttaccaatcaagatgggttacacaccaatgcc
atttatgcgtttaaaaacatgctagatattattttgaaacggtttgaaccaacacacgtc
ttagtggcttttgatgcgggcaaaacgacttttagaacggcacagtttgccgactataag
ggcggtcgttctaagacgccaccagaattaacggaacagtttccttatatcaaggaatta
ttgcatgcttatggcattcagacggctgaattagccaactatgaagctgatgatattatt
gggacgttggcgagccaagcagaacaagacggctttgttgtcaatatcgtgacgggtgat
cgtgatttaacacaactaacgacggataaaacgaccgttaatatcacagtcaaaggtgtc
aacgatacagaagcctacacaccggaacatgtacaagaaaaattaggcttagcacctagt
caaatcgtagacttaaaaggtttgatgggtgatacctctgataattatccgggtgtcaca
aaggtcggcgaaaagacagcgctgaaactcttaacggaatttgggagcatcgaaggggtc
tacgaaaatgtcgatgcaatgaaaaagagtaagatgaaagaacatctgattgaagatcgt
gatcaagcctttatgagcaaaaaattggcgacgattttgcgggatgcaccgatcgaaacg
acgttagcagacatcacgtatgaaggtcccaacatcgatacgttgattgctttttatcaa
gaaatgaactttcaaaactttttaaagcaattaaacgtgacaccagaagcggttgaaccg
gcggaaaactatcaatatactgttttgacgttggataatttagaaaccgttcaagcgatt
aaaacaccggttgccttcggggttgaaatgttaaccgataattatcacacagccgattta
attggtttttatatcggcgcaccagatcattggtatgtcagtgatgatgttgcactacta
gctgaaccagtattgaaggattggttggaagatgcgagtcatcctaaagcagtcttcggt
gtcaaacggacacaagtcgcagctaatcgattaggggttcatttagccggcgttgatttc
gatttattattagcatcctatttattgaatacgacgaataacagcaacgatttagggacg
gtcgctaatttacacgagtatcaaaatgtgcaaacagacgaggccgtttatgggaaaggt
gctaaacgggctgttccaactgaaccagctttgttgtatcaacatttggttcaaaaagcg
gcagccatttatcatttacaaccacaacttgaagaacaattgaaggaacatcaacaattc
gatctctttacggatatggaattaccattggcccttgtattggcgcaaatggaaataacc
gggattcgggtcgatgccagtcgcctccaacaaatggggtcagaattcagccaaaccttg
aagatcttggaagaaaaagtttacgctgaagctggcgaaaccttcaacattaactcacct
aagcaactgggcgttattttatttgaaaaaatgggcttaccagtggttaagaagacgaag
acgggctattcaaccgctgttgatgtacttgaacaattacggaaggatgcaccaattgtc
caaacaattttggattatcgtcaaattgccaagattcaatcaacgtatgtcgaagggtta
ttgaaatcaatccatcaagataataaggtccatacgcgttacttacaaaccttgacgcaa
actggccgtttatcgtcggttgatcctaacctacaaaacattccagttcgtttggcagaa
ggccgcaagattcgccaagcctttgttccaagtcacccagactggcaaatgtttgcttct
gattactcgcaaatcgaattacgagtattagcacacatctcaggggatgccaacatgcaa
gaagcctttaaagaagaccgggatattcatgcaaatacagcgatgaagatctttggttta
aatagtgccgatgaagtgacaccagatatgcggcgccaagctaaagctacgaatttcggg
attgtttacgggattagcgattatggcttatctcaaaatatcggcatttcgcggcaagaa
gccaaacgttttatcgacgcttatttcgaacaatatccaggtgtccaacaattcatggtt
gatattgttaaaaaagcgcgtgaagaaggctatgtcgaaacgcttttccaccgtcgtcgt
tatttaccagatattcacgctaagaactttaacctccgttcttttgcagaacggacagcg
atgaatacgccaattcaaggtagtgctgcggatattatcaaggtggcgatgattttaatg
caacaagaattgaagaaggcgaacttgcaagccagaatgttattacaagtacatgatgaa
ttgatttttgaagcaccaactgaagaaataccaatcttacaaaaattagtcccaagtgtg
atggattcagccgttaaattagcggtgccattgaaggtcgaaagtggttttggcccaact
tggtacgatattaagaaataa
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