Latilactobacillus sakei subsp. sakei: LCA_1495
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Entry
LCA_1495 CDS
T00299
Symbol
rfbB
Name
(GenBank) Putative dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Pathway
lsa00521
Streptomycin biosynthesis
lsa00541
Biosynthesis of various nucleotide sugars
lsa01100
Metabolic pathways
lsa01110
Biosynthesis of secondary metabolites
lsa01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LCA_1495 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LCA_1495 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LCA_1495 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LCA_1495 (rfbB)
00525 Acarbose and validamycin biosynthesis
LCA_1495 (rfbB)
Enzymes [BR:
lsa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LCA_1495 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
CAI55797
UniProt:
Q38VI6
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Position
complement(1467578..1468582)
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AA seq
334 aa
AA seq
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MIRHILVTGGAGFIGSNFVRYVVRQQPEVHVTVLDKLTYAGNRANLAGLPAERVTLVVGD
ICDAPLVQQLVQKVDAVVHYAAESHNDNSLQDPTPFIQTNIMGSYTLIEACRQYHVRYHH
VSTGEVYGDLPLVGDAKFTPETRYNPSSPYSASKASSDLLVRAWVRSFGLRATISNCSNN
YGPYQHIEKFIPRQITNILSGRRPKLYGTGQNIRDWIHTDDHSSAVWTILTRGRIGETYL
IGADGQRTNQAVLEMILTLMGQPKDAYDQVQDRPGRDLRYAIDATKLREELGWQPQLTDF
KVGLQQTIDWYRHHEEWWQADKAKVEARYARNKQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatacgtcatattcttgtaaccggtggtgccggttttatcggttctaattttgttcgc
tatgtggtccggcaacagccagaagtccatgtaacggttttggataagttaacgtacgct
ggtaatcgggctaatttagccggcttaccagcagaacgagtgacgttggtagtcggtgat
atttgtgatgcaccattggttcagcagttagtccaaaaggtggatgcggtggtacattat
gcagctgaaagtcataatgataattcgctgcaggatccaacaccttttattcaaactaat
attatgggttcctatacgctaattgaagcctgtcgacaatatcatgtgcggtatcatcac
gtttctacaggtgaagtttacggcgatttaccgttagtaggtgatgcaaaatttacaccc
gaaacacgttataatcctagtagcccgtactccgcttccaaggcgagttctgatttgtta
gtacgggcgtgggtgcgctcatttgggctacgcgcaacgatatccaattgttccaataat
tatgggccgtatcaacatattgaaaagtttatcccgcgtcagattaccaatattttaagt
ggtaggcgccctaagttatatggcactggccaaaatattcgtgattggattcatacggat
gaccactctagcgctgtttggacaatattgacacgtggccgaattggcgagacctatttg
attggtgctgatgggcaacgcacgaatcaagctgttttggaaatgattttaacattgatg
gggcaacccaaggatgcatatgatcaagttcaggatcgaccagggcgtgatttgcggtac
gccattgacgcgaccaagcttcgtgaagaacttggatggcaaccgcaattaaccgatttt
aaagttgggttacagcagacaatcgattggtatcggcaccatgaggaatggtggcaagca
gataaagctaaggtagaagcgagatacgcgcgtaataaacaatga
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