Latilactobacillus sakei subsp. sakei: LCA_1631
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Entry
LCA_1631 CDS
T00299
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lsa
Latilactobacillus sakei subsp. sakei
Pathway
lsa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LCA_1631 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsa03021
]
LCA_1631 (rpoE)
03400 DNA repair and recombination proteins [BR:
lsa03400
]
LCA_1631 (rpoE)
Transcription machinery [BR:
lsa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LCA_1631 (rpoE)
DNA repair and recombination proteins [BR:
lsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LCA_1631 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4404
BUD22
Motif
Other DBs
NCBI-ProteinID:
CAI55938
UniProt:
Q38V46
LinkDB
All DBs
Position
complement(1616829..1617437)
Genome browser
AA seq
202 aa
AA seq
DB search
MKLDVFKGQNKEELSMIEVAHAILEGKGDTIAFADLTNEVQNYLGKSDEEVRARLSQFYT
DLNEDGSFISLGENVWGLRSWYPYESVDEEVNHPEDEEDQPTKKKRRKKVNAFLADVADD
DDVIDYSDDDPEDEDLDVEDDAELVVTDDDSSDDLTEYKADLQSIGDDDDDEDDALEDGI
EGQLSEFSEDDEDEDDDEDDEL
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattagacgtttttaaaggccaaaataaagaagaactatcaatgatagaagtcgct
cacgcaattttagaaggcaagggcgacacaattgcatttgctgacttaacgaatgaagtc
caaaattatttaggcaaaagtgatgaagaagtgcgtgcacgcttatcacaattttataca
gatttaaacgaagatggtagctttatttctttaggcgaaaacgtttggggcttgcgttct
tggtacccatatgaatctgtcgatgaagaagttaaccatccagaagatgaagaagaccaa
ccaactaagaagaaacgtcgtaagaaggttaatgctttcttagccgatgtggctgatgac
gacgatgttattgactatagtgatgatgatcccgaagacgaagatttagacgttgaagat
gacgcagaacttgtcgtaaccgatgatgattctagtgatgatctaactgaatataaagca
gacttacaaagcatcggtgacgatgatgatgacgaagatgatgcactggaagatggtatc
gaaggtcaattatcagaatttagcgaagatgatgaagacgaagacgacgatgaggatgat
gaactttag
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