Latilactobacillus sakei subsp. sakei: LCA_1683
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Entry
LCA_1683 CDS
T00299
Name
(GenBank) Putative DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lsa
Latilactobacillus sakei subsp. sakei
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsa03400
]
LCA_1683
DNA repair and recombination proteins [BR:
lsa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LCA_1683
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
ABC_tran
AAA_22
AAA_16
AAA_24
AAA_14
AAA
GvpD_P-loop
RecA
NTPase_1
nSTAND3
SLFN-g3_helicase
ATPase_2
AAA_5
DZR
Elong_Iki1
AAA_19
MCM
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
CAI55990
UniProt:
Q38UZ4
LinkDB
All DBs
Position
complement(1664119..1665483)
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AA seq
454 aa
AA seq
DB search
MAKVKTQFVCQNCGYSSPRFLGRCPNCGAWNQMVEEREQPAAAAKSNFTISGRATEPEKI
STVNIQKEPRVKTELNELNRVLGGGVVPGSLILIGGDPGIGKSTLLLQVSGQLEKVGKIL
YVSGEESASQIKMRANRLGVNGDQLYLYPETDMGNIRHQIETLKPEYVVIDSIQTMSEPE
VTSAVGSVSQVRQVTAELMRIAKTNQITIFVVGHVTKEGAIAGPKILEHMVDTVLYFEGD
THHTYRILRSVKNRFGSTNEIGIFEMREAGLQEVANPSEIFLEERLAGATGSAVVVSMEG
TRPILVELQTLITPTLFGNAKRTSSGLDHNRVSLIMAVLEKRASLMLSNQDAYLKATGGV
KLDEPAIDLAMAVSIASSYRDKEIPPTDCFVGEIGLTGEIRRVNRIEQRVGEAAKLGFKR
IYVPKNNLQGWDPPTDIQVVGVTTIAETLKKVFN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaagttaaaacgcagtttgtctgccagaattgtggctatagttcccccagattc
ttggggcgctgtccgaattgtggtgcttggaaccaaatggttgaagaacgtgaacaacca
gccgcagcggcaaaatcaaatttcacaatttcaggacgcgccactgaacctgaaaaaatt
agtaccgttaatatccaaaaagaaccccgtgttaaaacggaattaaatgaattgaatcgt
gttttaggtggcggcgttgtgccagggtcactgattttaatcggtggggatcctgggatt
gggaaatcaaccttgttactacaagtttcagggcaacttgaaaaagtgggtaagatccta
tatgtttcaggtgaagaaagtgcctcgcaaattaagatgcgggcgaatcgattaggagtt
aatggcgatcaattgtatctgtatcccgaaacggatatgggcaatattcgccaccaaatc
gaaacgctcaaaccagaatacgtcgtgattgattcgattcaaacgatgagtgaaccagaa
gtgacttccgcagtcgggagtgtttcgcaagttcgccaggtaaccgcagaattgatgcgg
attgctaaaacgaatcagattaccattttcgtggtgggacatgtgacgaaggaaggggca
attgccggccctaagattttggaacatatggtggataccgtgttgtactttgaaggtgac
actcatcacacttaccgaattttacggtctgttaaaaaccgatttggttcaaccaacgaa
atcgggattttcgaaatgcgggaagcaggcttgcaagaagtcgctaatccatccgaaatt
ttccttgaagaacggctggctggtgcgaccggttcggcggttgtggtttcaatggaaggg
acaagaccaatcttggttgagttacaaactttgattaccccaaccttgttcggaaatgca
aaacggacttcttcgggattagatcataatcgggtgtcattgattatggcggttttagaa
aagcgggcgagtttgatgctttccaatcaagatgcttatcttaaagcaaccggcggggtt
aagttagacgaaccggcgattgatttggcgatggccgtctcgattgcttccagttatcgc
gataaagaaattccaccaaccgattgttttgtcggtgaaattggcttgacgggtgaaatt
cggcgggtcaatcggattgaacaacgcgttggcgaagcggcgaagttaggttttaaacgg
atttatgtccctaaaaataatttgcaaggttgggatccaccaactgatattcaagtcgtt
ggggtcaccacaattgcagaaactttaaaaaaagtattcaactag
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