Latilactobacillus sakei subsp. sakei: LCA_1779
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Entry
LCA_1779 CDS
T00299
Symbol
clpC
Name
(GenBank) ATPase/chaperone ClpC, putative specificity factor for ClpP protease
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
lsa
Latilactobacillus sakei subsp. sakei
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lsa03110
]
LCA_1779 (clpC)
Chaperones and folding catalysts [BR:
lsa03110
]
Heat shock proteins
HSP100
LCA_1779 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_18
IstB_IS21
TniB
AAA_14
nSTAND3
Zeta_toxin
RuvB_N
RNA_helicase
TsaE
AAA_7
bpMoxR
Torsin
NACHT
AAA_28
ResIII
DNA_pol3_delta2
UVR
NBD_SMAX1
HGD-D
Motif
Other DBs
NCBI-ProteinID:
CAI56087
UniProt:
Q38UP8
LinkDB
All DBs
Position
complement(1755046..1757514)
Genome browser
AA seq
822 aa
AA seq
DB search
MNNLFTPSAKNVLMLAQEQAKKFNHHALGTEHLLLALVLESEGIAGNALRELGVTPTDVL
EEIERLTGYGDSIVAMGVGGYLPYSPKAKQVLDLARVESQQANSVKIGTAHLLLALLRDD
DIIAARILLNLGLSLAKTRQLLLQKMGIDAATAKKRAKASAKKVDQEGTPTLNQLARDLT
QMARENQIDPVVGRDSEVKRLVQILARRSKNNPVLIGEPGVGKTAIAEGFAQRIINGDVP
SDMQQKRLMMLDMGSLVAGTKYRGEFEDRLKKIIEEIHEDGQVILFIDELHTLIGAGGAE
GAIDASNILKPALARGELQLIGATTLDEYQKYIEKDAALERRFATVTVDEPTPEDAEQIL
RGLRPRYEEHHGITISDEALHEAVVLANRYITNRFLPDKAIDLMDEAAAKVRLDAVNQKS
PIDRLETELQSLAKEKEVAVGAQDFEKAAAIHEKEIIAKAKMAKRQAAEQENGVRTDIQV
QPEDIAQVVAQWTGVPVTQLQRKESERLLQLEKVLHERVVGQEEAISAVARAIRRARSGL
KDPKRPIGSFMFLGPTGVGKTELAKALAEAMFGSEDNLIRVDMSEYMERYSTSRLVGAAP
GYVGYDEGGQLTEKVRNKPYSVVLFDEVEKAHPDVFNILLQVLDDGYLTDSKGRKVDFRN
TIMIMTSNLGATALRDDKSVGFGVKDVTADYKAMQGRILEELKKLFRPEFLNRIDETVVF
HSLTQPELREIVKIMSKGILNRLAEQGVKIKMTAAAMDVVAKAGFDPEYGARPIRRALQT
QVEDRLSEALLAGEITTDTPVTIGATKGEITINSKKEKTTVK
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctatttacaccaagtgccaaaaacgttttaatgttagcgcaagaacaagct
aagaagtttaatcatcatgcattagggacggaacatctgttattagcgctcgtcctcgaa
agcgaagggattgctgggaacgcactacgtgaactcggtgtgacacccactgatgtcttg
gaagaaattgaacgcttaaccggttatggtgattcaatcgttgccatgggtgtgggcggc
tatttgccatactcacctaaagccaaacaagtgctggatttagcgcgcgttgaatcacaa
caagctaactcagtcaaaatcgggacggcacacctattattagcgttattacgcgatgat
gacattattgcggcccgtattctattaaacttaggcctcagtttagccaaaacacgtcaa
ttattactccaaaagatggggattgatgctgcaactgctaagaaacgcgctaaagccagt
gctaaaaaggttgatcaagaaggcacgcctactttgaatcaattggcacgcgatttaacc
caaatggcccgcgaaaatcaaattgatccagtcgttggtcgtgattcagaagttaaacga
ctcgtgcaaatcttagcgcgtcgttctaaaaataatccagttttaattggcgaacccggt
gtcggtaaaacagcgattgctgaaggctttgcccaacggattatcaacggcgatgtgcca
agcgatatgcaacaaaaacggttaatgatgcttgatatgggctcattagtcgctggcact
aagtatcgtggggaatttgaagatcgtctcaagaagattattgaagaaatccatgaagat
ggccaagtaatcctctttatcgatgaattgcataccttaatcggtgctggtggggcagaa
ggcgcaattgatgcctcaaacatcttgaaacccgccctcgcccgtggcgaattgcaatta
atcggtgcaacaacacttgatgaataccaaaaatacatcgaaaaagatgcagctctagaa
cggcgcttcgcaacggtgacggttgatgaaccaacaccagaagatgcggaacaaatctta
cgcgggttacgaccacgttatgaagaacatcatggcatcacaatttctgatgaagcatta
cacgaagccgttgttttagcgaaccgttatatcacaaaccgtttcttacctgataaggca
attgatttgatggatgaggcggctgcaaaggtcagattagatgctgttaaccaaaaatca
ccaatcgatcgcttagaaactgaattgcaatcgttggcgaaagaaaaagaagtcgcagtt
ggtgcacaagactttgaaaaagccgctgccattcacgaaaaagaaattattgctaaggct
aaaatggctaagcgccaagcagccgaacaagaaaatggtgtccggacagatattcaagtc
caaccagaagatatcgcacaagtcgttgcccaatggacgggtgtgccagtcactcaattg
caacgtaaagaaagcgaacgcttgttgcaacttgaaaaagtcttgcatgaacgtgttgtt
ggccaagaagaagcgatttcagctgtggcccgtgcaattcgtcgggcccgcagtggtttg
aaggatcctaagcgcccaatcggttcatttatgttcttaggccctactggggttgggaag
accgaattggccaaagcattggcagaagccatgtttggttctgaagacaacttgattcgg
gttgatatgtcagaatacatggaacgttacagtacgagtcgtttagtcggggcagcacct
ggttacgtcggttatgacgaaggtggccaattaactgaaaaagtccgcaataaaccttat
tccgttgttctttttgatgaagttgaaaaggctcatccagacgtcttcaatatcctgtta
caagtcttagatgatggttatttgacagattctaagggtcggaaggttgacttccggaac
acaatcatgatcatgacgtctaacttaggggcaacagccttacgtgatgacaagtcagtt
ggttttggggtcaaagatgtcactgccgactacaaagcaatgcaaggtcggattttggaa
gaattgaagaagttattccgcccagaattcttaaaccgaatcgacgaaacggtggtcttc
cattcattaacacaacctgaattgcgtgaaatcgtcaagattatgtccaaaggcatctta
aaccgcttagcggaacaaggtgtcaagatcaagatgactgctgcagcgatggatgttgtg
gctaaagccggctttgatccagaatacggtgcgcgcccaattcgccgtgcattacaaacg
caagttgaagatcgcttgagtgaagccttattagctggtgaaatcacaacggatacgcca
gtcacaattggggctaccaaaggtgaaattaccattaatagtaaaaaagaaaaaacaact
gttaaataa
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