Latilactobacillus sakei subsp. sakei: LCA_1880
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Entry
LCA_1880 CDS
T00299
Symbol
trmE
Name
(GenBank) tRNA modification GTPase trmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lsa
Latilactobacillus sakei subsp. sakei
Brite
KEGG Orthology (KO) [BR:
lsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsa03016
]
LCA_1880 (trmE)
Transfer RNA biogenesis [BR:
lsa03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LCA_1880 (trmE)
Prokaryotic type
Methyltransferases
LCA_1880 (trmE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
Ras
Roc
AAA_16
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CAI56186
UniProt:
Q38UE9
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All DBs
Position
complement(1878167..1879555)
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AA seq
462 aa
AA seq
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MPTTVTEFDTITAISTPPGEGAISIVRLSGDDSLAIIKRVYRGKDLDKVASHTINYGHII
DPKTDAVVDEVMVSVMRAPKTFTREDVIEINCHGGIVATNRILQLLMSYGARMAEPGEFT
KRAFLNGRIDLTQAESVMDLIRAKTDRAMQVAVDQLDGSLTHLIKNLRQEILEVLAQVEV
NIDYPEYDTDEMTTRILLEKAELVKGRIGELLQTAQQGKVLREGLATAIVGRPNVGKSSL
LNHLLHEDKAIVTDVAGTTRDVLEEYVNVRGVPLKLVDTAGIHDTEDKVEKIGVERSRAA
ITKADLILLVLNQSEPLTIEDRELITATTDKKRIIILNKTDLPNQLDLDELQTLVRADEV
IQTSILTSEGVTDLEAQIAKLFFGGIENSQSTVMITNARQIGLLNQAQQSLDEVISGIAA
GMPVDLVQIDMTNCWDKLGEITGDSAPDELITELFSQFCLGK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgacagtcacagaatttgatacgattacggcgatctcaacaccacctggtgag
ggggcaatttcaattgtgcgtctttcaggagatgacagtttagccatcattaaacgggtt
tatcgcggcaaggatctcgataaagtggcgagccatacgattaattatggccatattatt
gaccctaaaacggatgcggtggtcgacgaagtcatggtttctgtcatgcgtgcgcctaaa
acatttacgcgcgaagatgtgattgaaattaattgtcatggtgggattgtggcgactaac
cgaatcttgcaactattgatgagttacggtgcacgaatggccgaaccaggtgaattcacg
aagcgggcctttttaaacgggcggattgatttaacccaagccgaatctgtgatggacctc
atccgggccaagactgaccgggcaatgcaagttgctgttgatcaattggatgggagctta
acgcatcttattaagaatttacgccaagaaatcttagaagtattggcgcaagtcgaagtt
aacattgactatcccgaatacgatacggatgaaatgacgacccggattttacttgaaaaa
gctgaacttgttaaagggcgaattggtgaattactccaaacagcgcaacaaggcaaagtc
ttgcgtgaagggttggcaacggccatcgttgggcgaccaaacgtcggtaaatcaagtttg
ttaaaccatcttttacatgaagataaagccattgtgacggatgttgctggaacgacccgt
gatgttttggaagaatacgttaacgtccgcggcgtaccattgaagctggttgatacggcg
gggattcatgataccgaagataaggttgaaaagattggggtcgaaagaagtcgcgcagca
attaccaaagccgacttgattttattggtcctaaaccaaagcgaacctttaacgattgaa
gatcgcgaactaatcacggcgacaactgataagaaacggatcattattttaaataagact
gacttacctaatcaattggacttagatgaacttcaaacattagttcgtgcggatgaagtg
attcaaacgtcaattttaacgagtgaaggggtgactgatttggaagcccaaatcgccaaa
ctcttcttcggtgggattgaaaatagccaaagtacggtgatgattaccaacgcccgtcaa
attggcttattaaaccaagcacaacaatcattagatgaagttattagcgggattgcagct
ggcatgccagttgacctcgtccaaatcgatatgaccaactgttgggacaagctcggtgag
attaccggggattcagcaccagatgaattgattacggaactctttagccaattctgttta
ggtaaatag
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