Loktanella salsilacus: KBK07_00025
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Entry
KBK07_00025 CDS
T08282
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lsal
Loktanella salsilacus
Brite
KEGG Orthology (KO) [BR:
lsal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lsal03032
]
KBK07_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
lsal03400
]
KBK07_00025 (gyrB)
Enzymes [BR:
lsal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KBK07_00025 (gyrB)
DNA replication proteins [BR:
lsal03032
]
Prokaryotic type
DNA Topoisomerases
KBK07_00025 (gyrB)
DNA repair and recombination proteins [BR:
lsal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KBK07_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
Toprim_4
GyrB_insert
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UTH44531
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Position
4441..6858
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AA seq
805 aa
AA seq
DB search
MSDDTAENAAYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAG
HADHVSVKIHADGSVSVGDNGRGIPVDMHKEEGVSAAEVIMTQLHAGGKFDSNSYKVSGG
LHGVGVSVVNALSDYLELRIWRNGKEHYARFEGGYTTESLRVVGDANGRKGTEVRFLASL
ETFSNRDYDFHTLEKRLRELAFLNSGVRIILEDERPAEPLRTELFYEGGVKEFVKYLDRS
KSSILPEPIYVRGERDDIGIEVAMWWNDSYNEMVLPFTNNIPQRDGGSHMAGFRAALTRT
INNYAQSSGIAKREKVSFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPAVENL
VGEKLAEWFEENPSIAKVVVGKIVEAALAREAARKARDLTRRKTAMDVNFLAGKLKDCSE
KDPSKTEVFLVEGDSAGGSAQTGRDRGTQAILPLKGKILNVERARFDRMLGSQEIGNLVM
ALGTGIGRDEFNIKKLRYHKVIIMTDADVDGAHIRTLLLTFFFRQMPELIEGGYLYIAQP
PLYKVARGKSEVYLKDQAAMDEYLIEQGTEGAMLRQGNGEEISGADLRRVVDDARQLKRV
LDAFPTHYPRHILEQAAIAGAFAPGAVSADLQGVADKVATRLNLIALEWERGWQGRITQD
HGMRLARILRGVEEVRTLDGGLLRSGEARKTGTFTQALQDVYDLPAKLIRKDRSQMIHGP
LDLLAAILEEGERGLSLQRYKGLGEMNPEQLWETTLDPDARTLLQVKVDDLAEADDLFTK
LMGDVVEPRRIFIQDNALNVENLDF
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgacaccgccgaaaacgccgcctacggcgctgattccatcaaagttttgaag
gggttggaggccgttcgcaaacggcccggcatgtatatcggcgacaccgatgacggttct
ggcctgcaccacatggtctacgaagtcgtggataacggcattgacgaggcgcttgccggt
cacgccgaccacgtcagcgtgaaaattcatgccgatggctccgtctctgtgggcgataac
ggtcgcggtatccctgtcgacatgcacaaagaagagggcgtcagcgcggccgaggtcatc
atgacccagctgcacgcgggcggcaaattcgacagcaattcgtacaaggtgtccggcggc
ctgcacggcgttggcgtgtccgttgtgaacgcgctgtccgactatctggaactgcgcatc
tggcggaacggcaaggagcactatgcgcgtttcgagggtggctacaccacggaatccctg
cgggtcgtgggcgacgcgaatggtcgcaaaggcacggaagtacgctttctagccagcctc
gagacattctctaaccgcgactacgactttcatacgctggaaaagcgcttgcgcgaactg
gccttcctgaactctggcgtgcgcatcatcctagaggacgaacgccccgcagaacccctg
cggacagagctgttctatgagggcggcgttaaggaattcgtgaaatacctcgaccgttcg
aaatcctcgatcctgccagagccgatctatgtccgcggcgaacgggacgatatcggcatc
gaagtcgcgatgtggtggaacgacagctacaacgaaatggtgctgccgtttaccaacaac
atcccgcagcgcgacggtggttcgcatatggcgggcttccgggccgccttgacccggacg
atcaacaactacgcccaatcgagcggaatcgcgaaacgggaaaaggtgtcctttaccggc
gacgacgcacgcgagggtctaacctgcgtgctttccgtcaaagtgccagatccgaaattc
tcgagccagaccaaggacaagctggtctcgtcagaggtgcgccctgcggttgaaaacctt
gtcggcgaaaagctggccgaatggtttgaagaaaacccgagcatcgccaaagtcgtcgtc
ggcaagatcgtagaggccgccttggcgcgtgaagccgcccggaaagcccgcgatctgacc
cgccgcaaaacggcgatggatgtgaacttcttggctggaaagcttaaggattgttctgaa
aaagatccgtcaaaaaccgaagtcttcctggtcgagggtgattccgctggtggctctgcc
cagacaggtcgggaccgcgggacgcaggcgattttgccgctgaagggtaagatcctgaac
gtcgaacgtgcgcgttttgaccggatgctaggcagccaggaaatcggtaaccttgttatg
gcgctcggcaccggcatcggtcgggacgagttcaacatcaagaaactgcgctaccacaag
gtcatcatcatgaccgacgctgacgtcgacggcgcgcacatccggactcttttgctgacc
ttcttcttccgccagatgccggaactgatcgagggcggttacctctatatcgcgcagccg
ccgctctacaaagtcgcgcgcggcaagtctgaagtgtacctgaaggatcaggccgcgatg
gacgaatacttgatcgagcagggcactgaaggtgcgatgcttcggcagggcaatggcgag
gaaatcagcggtgcagacctgcgccgtgttgtggatgatgcgcgtcagcttaagcgtgtt
ttggacgcctttccaacgcattacccgcgccacattttggaacaagccgccatcgcgggc
gcctttgcccccggtgccgtcagcgccgatttacaaggcgtggccgacaaggtggcgacc
cgtctgaacctgatcgcactggaatgggaacgtggctggcaaggccggatcacgcaggat
cacggcatgcgtttggcgcgcattctgcgcggcgtggaagaagttcgcacacttgacggc
ggcttgctgcggtcaggcgaagcgcgcaagaccggcacctttacgcaggcgctgcaggac
gtttacgacctgcccgctaagctgatccgcaaggaccgcagccagatgatccacggcccg
ctcgacctgcttgccgcgattctggaagagggcgagcgcggcttgtccctgcaacgctac
aagggtctgggcgagatgaacccagagcagctgtgggaaaccacgctggacccagatgcc
cgcacgctgctgcaggtcaaagtggatgatctagccgaggccgacgatctgttcacgaag
ctgatgggcgacgtcgtcgagccgcgccggatctttatccaagacaacgcgctcaacgtc
gaaaatctggacttttaa
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