Loktanella salsilacus: KBK07_04730
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Entry
KBK07_04730 CDS
T08282
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lsal
Loktanella salsilacus
Pathway
lsal03420
Nucleotide excision repair
lsal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KBK07_04730
03430 Mismatch repair
KBK07_04730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsal03400
]
KBK07_04730
Enzymes [BR:
lsal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KBK07_04730
DNA repair and recombination proteins [BR:
lsal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KBK07_04730
MMR (mismatch excision repair)
Other MMR factors
KBK07_04730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
UTH45376
LinkDB
All DBs
Position
933392..935788
Genome browser
AA seq
798 aa
AA seq
DB search
MSSYSEDDAFEAAARPLSQRAMPQRSAGPYLEGLNDAQRAAVMALNGPVLMLAGAGTGKT
KALTSRIAHLLVTGTARPQDVLAVTFTNKAAREMKNRVGRLMGETVEGMPWLGTFHAICV
KLLRRHAELIGLKSNFTILDTDDQIRLMKQLIIAAGIDEKRWPPRMLAGIIDGWKNKALT
PDKVPLAEAGAFDQKGVDLYSAYQRRLLDLNACDFGDLLLHMVTIFQTHTDVLEMYQRRF
RYILVDEYQDTNVAQYLWLRLLAAAHKNICCVGDDDQSIYGWRGAEVGNILRFEQDFPGA
TVVKLEQNYRSTEHILAAASGVIAGNKGRLGKTLFTEATGGEKVRLIGHWDGEEEARWIG
EEIEALQRGTRGLEKVSLDHMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIR
DAMAYFRLAVSQDDDLAFERIVNTPKRGLGDKAVQTIQKAARTNGVSLVEGARIVVQAKL
LGGKGLKELAQLVDGLDRWHAQVRSEADTHQELAEMILDESGYTGMWQNDKTPEAPGRLE
NLKELVKALDNFENLQGFLEHVALIMDNETEQEGEKVSIMTLHAAKGLEFPAVFLPGWED
GLFPSQRSMDESGVKGLEEERRLAYVGITRAEAICTISFAANRRVYGQWQSALPSRFIDE
LPEDHVEVLTPPGLYGGGYGAAGMAASASPKLREESMSDLHQKAHDANVYNSPGWRRLQA
RGQQRGMAQPVEARNMVIDMSAVSAFTTGDRVFHQKFGYGVIEGIEGDKLDIAFDKAGSK
KVVAKFIVAADAADDVPF
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttattccgaagacgacgcctttgaggccgccgcccgcccccttagccagcgg
gccatgccgcaacgcagtgccggcccttatctagaggggctgaacgacgcgcagcgcgcc
gctgttatggcgctgaatggtcctgtgttgatgctagcgggcgctggcactggaaaaacc
aaggcgctgacatcgcgaatcgcacatcttttggtgacgggcacggcacgcccgcaagac
gtgctggcggtgacttttaccaacaaagccgcccgagagatgaagaaccgcgtcggccgc
ctgatgggcgaaacggtcgaggggatgccgtggctgggcacttttcacgcgatctgcgtt
aagctgctgcgccgccatgcggaactgattgggctgaaatcgaactttacgattttggat
acagacgaccagatccggctgatgaaacagctgatcattgccgccgggattgatgaaaag
cgctggccgccgcgcatgctggccggaatcatcgacgggtggaaaaacaaggcgctgacg
cctgataaggtgccgctggccgaagcaggggcctttgatcagaaaggtgtcgacctttac
tccgcctatcagcgccgtctgttggacctgaatgcctgcgatttcggcgatctgctgctg
catatggtcacgatttttcagacgcataccgacgtgctggaaatgtatcagcggcgcttt
cgctatatcctcgtggacgaatatcaggacacgaacgtcgcccaatacctgtggctgcgg
ctgctggcggcggcgcataaaaatatctgctgcgtgggcgacgacgaccagtcgatctat
ggctggcgcggtgccgaagtcggcaacattctgcggttcgaacaggatttccccggcgcg
acggttgtcaaactggaacagaactaccggtctacggaacacattctggctgccgcctct
ggcgtgatcgccgggaataaggggcggctgggcaagaccctgttcaccgaggcgacgggc
ggcgaaaaagtgcgcttgatcggtcattgggacggcgaggaagaagcccgctggatcggc
gaagagattgaggccctgcagcgcggcacgcgcgggctggaaaaagtcagccttgatcac
atggcgattctggtacgggccagccaccagatgcgcgccttcgaggatcgctttctgacc
atcggtctgccctaccgcgtcatcggcgggccacgattctatgaacgtttggaaatccgc
gacgcgatggcctatttccggctcgcggtatcgcaggatgatgatctggcgttcgagcgg
atcgtgaatacccccaaacgcggccttggggacaaggcggtgcagaccatccaaaaggcc
gcacggaccaatggcgtcagccttgtcgaaggcgcgcggatcgtggtgcaggccaaactg
ctgggcggtaagggcctgaaagagttggcgcaactggtcgacggtctggatcgctggcac
gcgcaagtccggtcagaggcggatacgcatcaagaattggccgagatgatcttggacgaa
tccggctataccggcatgtggcaaaacgacaaaacgccagaggcgccgggccggcttgag
aacttgaaagaactggtcaaggcgctggataacttcgagaacctgcaagggttcttggaa
cacgtcgcgctgatcatggacaacgagacagaacaagagggcgagaaggtcagcatcatg
accctacacgccgccaagggtctggaatttcctgccgtgttcctgccgggctgggaggat
ggtttgttcccgtcccagcgcagtatggatgaaagcggtgttaaggggctcgaggaagaa
cgcaggctggcctatgtaggcatcacgcgggccgaggcgatttgcacgatctctttcgcc
gcgaaccggcgggtttacggccagtggcaaagcgcgctgccgtcccgctttatcgacgag
ctgccggaagatcacgtcgaggtgctgacgccgccggggctatacggcggcggctacggc
gcggcggggatggcggccagcgcgagccccaaactgcgcgaagaaagcatgtcggacctg
catcaaaaggcccatgacgcgaacgtctataactcgccggggtggcgcaggttgcaggca
cgcggccagcagcgcggcatggcccagccggtcgaggcccgcaatatggtcatcgatatg
agcgcggtcagcgcttttacgaccggcgaccgggtgtttcaccagaagtttggttacggc
gtgatcgaggggattgagggcgacaagctggacatcgctttcgacaaggctgggtccaag
aaggtcgtcgccaaattcatcgtggccgcagacgcagccgacgacgtgccgttctga
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