Loktanella salsilacus: KBK07_10315
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Entry
KBK07_10315 CDS
T08282
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lsal
Loktanella salsilacus
Pathway
lsal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KBK07_10315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsal03400
]
KBK07_10315
Enzymes [BR:
lsal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
KBK07_10315
DNA repair and recombination proteins [BR:
lsal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KBK07_10315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
UTH43518
LinkDB
All DBs
Position
complement(2103074..2104531)
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AA seq
485 aa
AA seq
DB search
MDLFEHATPASNAPEFTVSEISGAVKTMIEGEFGHVRIRGEVGRVSRPRSGHMYLDLKDD
RSVISGIIWKGRADALPQLPEEGMEVVATGKLTTFPGQSKYQIIIEDIAPAGAGALMAML
EKRKALLQAEGLFEAAHKQPLPFLPDIIGVVTSPSGAVIRDILHRLRDRFPRKVLVWPVA
VQGAKCATEVAAAIRGFNALTPGGALPRPDLLIVARGGGSLEDLWGFNEEIVARAAFDSN
IPLISAVGHETDTTLIDFVSDRRAPTPTAAAEMAVPVRMDLFAALDNQGARISRAVTQGL
GLRQQRVRDLARALPQSDALLQGPRQRLDYLGERLPAALNAAAAKKRVQLANAALRPAVL
QRGIAEQRRRLDTLGARLAPALQRRVTDAGAKLTGQRLIPPDLTRKRERLDDWLQRLSDR
AARQQDQRRARLAQLDRVRETLGYKETLKRGYAVVRADGAVVTTAQGVKDAAQVEIEFAD
GRVTV
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggacctttttgaacacgccacccccgccagcaatgcacccgaatttacggtcagtgaa
atttctggcgccgtgaagacgatgatcgagggtgaatttggccatgtccggatccgcggc
gaggtcgggcgcgtgtcgcggccccggtcggggcatatgtatctggacctaaaggacgac
cgttcggtcatttccggcatcatctggaaaggccgcgctgatgcgctgccgcaattgcca
gaagaaggcatggaagtcgtcgccaccggcaagctgacgaccttccccggtcagtctaag
tatcagataatcatcgaagatatcgcccccgccggggccggtgccctgatggcgatgctg
gaaaagcgcaaagcgttgctgcaggccgaggggttgttcgaggccgcgcacaagcagccg
ctgccgttcctgccggacatcatcggcgtcgtcacatccccctctggcgcggtgatccgc
gatattttgcaccgtctgcgggatcgctttccgcgcaaggttttggtgtggcccgtggcc
gtgcaaggcgcgaaatgcgcgacagaggtcgcggcggcgattcgcggatttaacgcgcta
acccccggcggggccttgccgcgcccggatttgttgatcgtcgcgcgcggcggtggctcg
ctcgaggatctttggggctttaacgaagaaatcgtcgcccgcgccgcattcgacagcaac
atcccgctgatttccgccgtggggcacgaaacggacacgacgctgatcgatttcgtgtcg
gaccgccgcgcgccgaccccaacggcagcggcggagatggctgtgccggtgcggatggat
ctgttcgcggcgctggacaaccaaggcgcgcgcatcagccgggcggtgacacaagggctt
ggcctgcgccagcagcgggtgcgcgatttggcccgcgccttgccgcagtccgacgccttg
ttgcaggggccgcgccagcggctggattatctgggtgaacgcctgcctgcggccttgaat
gcagcggcggcgaaaaagcgggtgcagctggcgaatgctgccctgcgccctgcggtcttg
cagcgcggcatcgcagagcagcgccgccgtcttgatacgcttggcgcgcggctggcccct
gccttgcagcgtcgggtcacggatgccggggcgaaactgactgggcaacggctgatcccg
cctgacctgacccgcaagcgagagcggctggacgattggctgcaacgcctgtctgaccgc
gccgcccgccagcaagatcagcgccgcgcccgtctggcgcagcttgaccgcgtccgtgaa
acgctggggtataaggaaacgctgaagcgcggctatgccgtggtgcgcgcggatggtgcg
gtcgtgacgacggcgcagggtgtcaaagatgcggcgcaggtcgagattgaattcgccgat
ggccgcgtgacggtctag
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