Littorina saxatilis: 138945809
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Entry
138945809 CDS
T10665
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
lsax Littorina saxatilis
Pathway
lsax04512
ECM-receptor interaction
lsax04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
lsax04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
138945809
Glycosaminoglycan binding proteins [BR:
lsax00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138945809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138945809
NCBI-ProteinID:
XP_070173419
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Position
LG13:complement(43520920..43594660)
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AA seq
1772 aa
AA seq
DB search
MKPSEVASLATILGVVISVFVDSVSSAACEGCTSSICICAGQKGERGASGLPGLRGPQGL
PGFLGPEGPVGGTGLKGRGGEPGARGSKGYRGETGLPGFTGAAGIPGQPGLEGPLGPGGY
PGCNGTKGLAGLSGRPGVPGESGRRGRDGVPGRKGYSGTFVIDGLVVGEKGDQGDSGLPG
IDGMPGNPGRRGASGFPGDDGTPGFNGIPGMKGMKGEQGNDGIGVPGPMGEKGLKGDIGS
GGQSGQPPSNTTQVFGDKGRKGDRGYKGEIGDRGFVGLPGPSGEVGSSGPKGGKGLDGPS
GRRGKRGKDGPPGPYGNKGMVGEKGFPGLPGLDGIKGMFGEGGYKGRTGPQGPPGIDGEF
VAGGESGVQGPRGRDGQPGPKGAPGRDGLPGEGGREGLPGLNGEPGPPGFNGEFGFPGDS
MKGDRGPAGLPGLDGKEGLPGFPGLSGEEGEKGRPGLRGIGDVGERGIPGQDGLPGLPGL
PGDPGFPGRKGEPGIGVNFPGPRGPQGLSGQIGDPGFPGTNGLPGLEGLKGFQGEDCGIC
PNGRPGMAGEPGDPGFPGGDGLPGAPGFEGLKGEPGEFGRPGENGREGQPGIPGRPGPDG
LPGLKGFTGDQLPPPDFELYRGRKGGKGSRGYPGIPGMVGVQGDTGTRGLPGLYGPMGMK
GDMGQPGDDGLDGLPGLPGNSGRKGGPGQSVQGPMGRKGQSGLPGLEGFPGPKGDTGPQG
DPFIVELTQGDPGEPGRPGFDGQPGLNGLPGEPGRPGDDGFPGLEGMSGDPGLPGLPGLQ
GRNGPKGYPGLMGDPGFPGLDGRPGEMGEDGLPGLPGRAGLPGRKGQTPLSAPEGLPGEP
GLRGEVGFPGQDGLPGETGRDGPNGFPGPKGEAGRPGLPGYPGEPGRGGDEGLPGLSGLP
GRDGEPGPRGRSGLPGVRGTDGLPGLPGEPGRLGDDGRPGLPGSSGEQGRDGRPGNRGLD
GLPGLPGLKGELGGSGRPGNPGVPGLDGLPGQPGQAGMDGDGGESGVPGIPGESGPPGLR
GQDGFPGVKGRQGEPGRPGVDGREGQPGDDGRPGLSGFPGQDGLPGLPGMKGNRGPSIPG
EPGRPGNPGRDGLPGLDGLPGTKGGPGPMGALGLPGLPGLRGEDGRPGENGRMAAPGRKG
QRGEEGVPGTSGEPGRPGLRGPPGLSGRPGQSGDRGQDGLPGLDGRPGPKGEDGLPGRPA
LPGREGRRGDDGRPGEPGFSGEQGRRGDDGENGFPGQRGRPGNPGFDGRPGFPGEPGQPG
DSGLVGPPGPDGAPAPPGRPGPPGEDGLPGLPGLSGQPGFMGEDGQNGRPGRKGERGEPV
QRLRGAKGSSGDPGFGGRPGRDGAKGMDGLDGLPGLRGMKGESGRPGASGLPGQPGQDGF
RGEEGEPGLPGFNGLPGLPGRNGLPGVEGIKGYKGEPGFSGRPGLPGFKGDIGEMGPPGV
APPFNSTDVQGERGEPGLEGFNGLPGFPGDPGPDGPSGLPGLFGQPGDQGIPGGRGDRGL
PGVPGRRGNSGLPGLPGEPGREGDLGNQGPPGRGPGIFFTRHSQLTTPPECPIGTIKMWE
GYSLLYVMGNGRAHGQDLGEAGSCLPRFSTMPFMFCNINNVCNVGSRSDYSYWLSTPEPM
TSMMNPVSGQQVRPYISRCSVCETPSPVIAIHSQTMAIPDCPNGWSGVWIGYSFVVGNGA
GSQGTGQGLNSPGSCLEDFRSTPFIECHGRGTCNYYSTSSSFWMATLERSDQFRRPLSET
LKAGDLRRRISRCQVCIKDYTTGPAAFFSIAK
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgagtgaagttgcctccctagcaacgattcttggagttgtgatatcagtcttc
gtcgactcggtgtcgtcggcggcctgtgaaggatgcacatcctcaatatgtatctgcgcg
ggccagaaaggcgaacggggagcgtcaggtctgcccggcctgaggggaccccagggcttg
cccggctttctggggccggagggacccgtgggcggcacggggttgaaaggcaggggcgga
gaacccggtgcccgcggttctaagggatacagaggtgaaactggcctgcctggttttact
ggcgccgctggaattcctggtcagccgggactggaggggccgctaggacctggtggttac
ccaggatgcaacgggaccaagggtcttgccggtctgtcaggtcggccaggtgtgcccgga
gaatcaggtcgccgaggtagagacggcgtacctggtcgcaagggctactctggcacattc
gtgattgacggcctggtggttggagagaagggagaccagggtgacagtggactgccgggc
atcgacggtatgccaggaaacccggggcgaagaggtgcctccggtttcccaggcgacgat
ggaacacctggttttaacggcatacctggaatgaaaggtatgaagggagagcagggcaac
gatggtattggcgtacccggacccatgggagagaagggtctgaagggagacatcgggtcg
ggcggccaatcggggcagccccccagtaacaccacgcaggtgtttggggacaaaggtcgc
aagggagatcgcggctacaagggggagataggcgaccgaggcttcgttggactgcccgga
ccatcgggggaggttggatcctccggccccaagggtggcaagggcttggacggaccgtcg
ggccgcaggggtaaacgcggcaaggacggcccacccggtccctatggtaataaaggaatg
gttggagaaaagggattccccggtctacctggtctcgacggaatcaagggcatgttcgga
gagggaggttacaagggtcgcactggtccacagggtcccccgggtattgacggagagttt
gtggcgggcggagagtctggagttcaaggtcccagaggtcgtgacggtcaacctggtcct
aaaggtgctccggggcgtgacggtctgcctggagagggaggtcgggagggactgccggga
ttgaatggagagcccggcccccccggtttcaacggagagtttggtttccctggcgactcc
atgaagggtgaccgcggtcctgcaggtctgcctggtttggacggcaaggagggacttcca
gggttccccggattgtcgggagaagagggagagaagggacggccgggcctgcggggaatc
ggggatgtgggagaacgtggtatccctggtcaggacggtttgccgggactgccaggtcta
cccggtgaccccggtttcccgggccggaaaggagagccaggcatcggcgtgaacttcccc
ggcccccgcggcccccagggtttgtccggtcagatcggtgaccccggcttccccggcacc
aacggtctgcccggcctggaggggctcaagggcttccaaggagaggattgtgggatctgt
cccaacggccgtcccggtatggccggtgaacctggagaccctggcttccctggtggggac
gggttaccaggtgcgccaggtttcgagggactgaaaggagagccaggtgaatttggtcga
ccaggtgaaaacggcagggaaggacaaccgggaatccccgggcgaccaggccctgacggt
ttgccgggactgaagggtttcaccggtgaccagctccccccacccgactttgagctgtac
cgcggccgcaagggagggaagggcagcagggggtacccaggtatcccgggtatggtcggc
gttcagggcgacactggcacacgcggtctgcccggtctctatggacccatgggaatgaag
ggagacatgggccagcctggtgacgacggacttgacggcctgccagggttgccaggcaac
tcgggacgtaaaggaggacccggccagtcggtgcagggacctatgggtcgcaaggggcag
agtggcctccctggactggagggattccccggccccaagggagacacaggtccgcagggt
gaccccttcatcgtggagctgacccagggagaccctggcgagccaggtagaccaggattt
gacggacaaccaggcttgaacggcttgccaggtgagccaggccggccaggtgatgacggg
ttcccgggcctggaggggatgagcggagacccggggctgccagggttgccagggctacag
ggtagaaatggccccaagggctacccgggcctgatgggagacccaggcttccccggtctg
gacggccgacccggagagatgggcgaagacggattgcccggattgccaggacgagctggt
ctgccaggtcgcaagggtcagacaccgctgtcagcacctgagggtttaccaggcgagcca
ggtctgcgtggtgaggtaggcttccccggccaggacggactaccgggagagaccggtcgc
gatggacctaacggcttccctggacccaaaggtgaggcgggtcgcccaggactgcccggt
taccccggagagccagggcgcggcggtgacgaaggtttgcccggtctgtccggcctgcct
ggacgtgacggagaacccggacctcgcggtcgttcgggtctgcccggtgtgcgcggcacg
gatggcttacctggcttacctggagagcctggcaggttgggtgacgacggtcgccctggg
ttaccaggttccagcggagaacaaggtcgcgacggtcgccctggcaacaggggtctggat
ggcctgccaggtctaccaggtctgaagggagagctcggtggatcaggacggccaggtaac
ccaggtgtgcccggtctggatggcttacctggacaacctggccaagcaggtatggacggt
gacggaggagagtcaggtgtgcctggtatcccaggtgagagcggcccccctggtctgcgc
ggtcaggatggattcccaggtgtgaagggaagacagggagagccgggccgcccaggtgtc
gatggcagggagggccagccaggagacgatggacggccaggactttctggtttccccggt
caggacggtctgcctggtctgcccggcatgaagggaaaccgtggacctagtatccccggt
gaaccaggtcgccctggtaacccaggtcgggacggtcttcccggtctggatggactgccc
ggtaccaaaggaggccccggccccatgggggctctgggtctacctggcttacctggcttg
cgaggagaggacgggcggccaggtgagaacgggaggatggcagcgccgggccgcaaggga
cagagaggcgaggaaggcgtacctggaacatcaggagaacctggtcgccctggcctgcga
ggacccccaggactcagtgggcggccaggtcagagcggtgaccgcggtcaggacggtctg
ccaggtctggacggtcgccccggccccaagggagaggacggtctgcccggccgtcccgct
ctgcctggtcgtgagggtcgccgtggtgacgacggtcggcccggtgagcctggcttttcc
ggtgagcaaggtcgtcgtggtgacgatggagaaaacggtttccctgggcaacggggacgt
cccggcaaccctggatttgacggccgccctggattccctggggagcctggccagcctggt
gacagcggtcttgtgggtccccctggtcctgacggtgcacctgctcctccaggtcgaccc
gggccacccggagaggacggtctcccagggttaccaggtctgtccggccaacccggcttt
atgggagaggatggtcaaaacggtcgccccgggcgcaagggagagcgaggagagccggtg
cagagactgcgcggtgccaaggggtcctctggtgaccccggctttggtggacgtcccggt
cgtgatggagccaagggaatggacgggctggatgggttgccaggtctgcgcggaatgaag
ggcgagtcgggtcgacccggggcatcagggttaccaggacaaccggggcaagacggtttc
cgtggtgaagagggcgagccaggcctacctggattcaacggtctacctggtctacctggg
cggaatggtctacctggcgtggaaggcatcaagggctacaaaggagaacccggcttctcc
ggccgtcccggtctgcctggattcaagggagatatcggtgagatgggcccgccaggtgtg
gcccctccattcaactccacggacgtgcagggtgagcgcggggaacctggacttgagggc
tttaatggtctacctggcttccctggagatccaggtccggatggtccgagtggtctgcca
ggtctcttcggtcagccaggtgaccagggtatccctggaggtcgcggtgatcgtggcttg
cccggtgtacctggtcgtcgtggcaacagcggcttacctggtttacctggagagccaggc
agggagggagatctgggcaatcagggcccacctggccgtggtcccggcatcttcttcacc
agacatagccagctgaccacacccccggagtgtcccattggcaccatcaagatgtgggag
ggctactctctgctctacgtcatgggtaacggccgcgcacacggacaggatctgggtgag
gcaggtagctgcttgccgcgtttcagcaccatgcccttcatgttctgcaacatcaacaac
gtgtgcaacgtggggtcgcgctccgactacagctactggctgtcaactcctgaacccatg
acctccatgatgaaccccgtgtcgggtcaacaggtgcggccgtacatctctcgctgctcc
gtctgcgagactccatcacctgtgatagcgatacacagtcagaccatggccatacctgac
tgtcccaacgggtggagcggggtgtggattggatacagcttcgttgtgggtaacggagca
gggtcgcaggggacgggtcagggtctcaactccccggggtcatgcctggaggacttcagg
tcgacacccttcatcgagtgccacggccgtggtacctgcaattactactccacctcatcc
agtttctggatggccacgttagagcgcagtgaccagttcagacggccgctgtcagaaacg
ctgaaggcgggcgatctacgacgccgaatcagcaggtgtcaagtgtgcatcaaagactat
accaccggcccagccgccttctttagcatcgccaagtag
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