Littorina saxatilis: 138946890
Help
Entry
138946890 CDS
T10665
Name
(RefSeq) sodium channel protein 1 brain-like isoform X1
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lsax04040
]
138946890
Ion channels [BR:
lsax04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138946890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GPHH
MBTP1_N
IQ_SCN5A_C
FAM176
Motif
Other DBs
NCBI-GeneID:
138946890
NCBI-ProteinID:
XP_070174396
LinkDB
All DBs
Position
LG1:complement(97384071..97590398)
Genome browser
AA seq
2201 aa
AA seq
DB search
MENVIALAAARTEMKQQEMMNEPKEDEMPAQTRKQLYFVPFTHASYQRLLVREATDKQKD
RERNARSQEAHLKDGELKFGLDEDELERRPDRNPDLEEGTSLKPEFGEPPPYYLGLPLEE
VDPGIPSKSFVVLSRWLHHIHIYRFCASPSCFLLPAWNPIRRIAVYVATNQIFDFLILFT
ILTNCICLAIPSLNQLEWLELVFFGIYLTEMLIKIVARGLFIGQFTYLRDPWNWLDLIVI
IAGVASFPAMSETLGAAESSTRQASSSTSATQALRTFRVLRAVKTISIFPGLRTIVNAML
RAIKMLLEVVLMTLFCLLVFSLVSVQLYRGSLRQKCVFNPQLLEHQTKVYEDYGYFYRRM
LHDPRNWALDTNGNYMLCGNATGAGACPLNYTCQPNIGENPDYGFMNFDNVFWSALITFQ
LMTIDFWENAYRKVLLTNGALTVLFFIMTVFFGSFYLMNLMLAVVAITYQEEAERTNKEI
ESETNSKRQRKQAAATFYNMTKMAKKQSVWAKLIHENKAKEKEKDKQMETPLQKLIRVKN
TINRWKKSNVPKELPVDPEYIVNFEPYATEKRTATYVAQNTKYFVKKWCDFIDRAKKREA
SKWAVHKERLLNVHGISLSSASGTPHIEVTATETPAKIAPWKQADKQSTSDSRPASTFGA
LKLKNVIEEGRKTEGLAEASTTAQDAKSPQERPGTNEGDTEKQNGPKTTKSTPHIKVTAT
ETPAKIPLWKQADTQSTSASTPAQDAKSPQERPGTYGGDKEKQNVRTISKKEVKPDSVNK
NTNMKAGENREQDNTDSPAGDNKQNDHCEGLSSRQGESCQLRRGQNDARATGFPKNEDVN
TNAKNLETGAGLKDEIQALDKNTDQHLQSVLHKDSVDPRRLPTPNPKAFVLSDVVVEAHK
KAVKLECELSFCNLDADSEDYELEQNARPRNWCCKIIWYRCPTLFFIMKRAVRRTRRVIR
STVADIFFDLFINFCIVVNTIIMSSEHHGQSTQLDTIISDGSVIFTVLFAMEAVLKIVGQ
GFRGYFASRWNRFDFLIAVISIVSIVLEKQNINGTQFLRAFRLLRVLKLAQVWPAMNSLL
MIIGSALGALGQLTCILLIILYIFAIVGLQLFKEKYTEYNFPSGVPRWNFNDFFHSFMMM
FRVLCGEWIEALWDCMRITEVHDSVCMLVFFPTLIFGNFIVLNLFLALLLNAFGEDENSQ
KDSRGTKRLHEAKKRIKNKFRWLLDCCCTHTMNVVVHKPIKDALPFEGETNPAVPTPKRS
VKPPAQVPGGPRRTSSKTAKTSHTDLRKVMSGTSNALQPNESSRTSTTMYSFVQKNRRQG
ITMELIEVKKKQKFPQCEGAEPPSCFPDLVLFHVFGAREWFNNTTYGIYWMKLRSAVMKL
VDNDIFEYGILFLILAGSATLGIEDYDYQLLPDTAPLKKITLMVNNVFASLFLAEMVLRW
LAFGLTRYFTSVWTIIDFIVVMVSMTSIISKDYFDELPSIRALVALRALRPLRVISRIQG
MKIVVNSLMRAIPAILNVFMVSLVFWLIFCVMGVQFFAGTFYKCIDINTEEKIDVLTKAE
CLATNNSYWFNSHINFDNVGNGFLALFQVATFEGWMEIMQDAVDSVGEDFQPIFENSLYT
YLYFVAFIICGSFFSLNLVIGVIIDNFNALKKKYEGSYLDAFLTLNQRNYYNTLKKMSAR
KPQKIITPPKYRFQKIFYELSVSDRFELILMTVVFLNMIVMGAEYYKYVIPCAWREVMFM
LEIAFSTFFTLEALLKIVGLRQHYFTVPWNVYDFTVAVFSFTNVAVHSYSLVVHDNQADA
KAGFYEGSLLFPPTFLRLLRIFRISKVLRIIKVAKGLRKVMFSLVISLPATFNIMALLMV
CLFIYAIFGMFLFHNVKLTGALTPHLNFRTLKNSALLLLSLSTAAGWNDVLDPLLIQEPF
CNNTHVLLASGKWKSSEDGDCGNFWFAIPYMVSYIILTYLFIINMYIAVILENYQQAHQQ
EEVGVTEDDFDMFYSVWQRYDPHATQFIPYQMLSDFVADLDAPLGIEKPNEIALVSINLP
ILQGDRVHCLDILLALVKNVLADIEESEEMSQLKQQINTKFTTRFPSRARMNVISTTMQR
KKEDVAARTLQRAWQVFKTQQAIYSIMKLSVKDTQTPGASSMPRTTPTVDELGHNVTLAY
AKHMTGLMQLAEQKKNAGSDRSINITEMRNKADLDETPPVI
NT seq
6606 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgtcatcgcactcgcagcggcgaggaccgaaatgaagcagcaggaaatgatg
aatgaaccgaaggaggacgagatgcctgcccagaccaggaagcagctctatttcgttccc
ttcactcacgcttcctatcagcgtctgcttgttcgcgaagcgaccgacaagcagaaggac
agggagagaaacgcaaggtcccaggaggctcacctaaaggacggcgagctgaagttcgga
ctggacgaggacgagctagagagaaggccggacagaaaccctgacctggaggagggcacg
tcattaaagccggagttcggcgagcccccaccctactacctcggcctgccactagaggag
gtcgaccctggaatcccgagcaagtcgttcgtggtgttgtcgcgatggctgcaccacatc
catatctatcgcttctgcgcttctccgtcctgtttcctcctgcccgcctggaaccccatt
cgccgcatcgcggtgtacgtggccacaaaccagatcttcgactttcttatcctcttcacc
attctcaccaactgcatctgtctcgccatcccatccctcaaccagcttgagtggctagaa
cttgtgttcttcggcatctacttgacagagatgttgatcaaaatagtggcgcggggcctc
tttatcggccagttcacctaccttcgcgacccctggaactggctcgacctcatcgttatc
attgcaggggtggcctcctttcctgcaatgagcgaaactctgggagcagccgagtcgagc
acgagacaagcctcctccagcaccagcgcaacacaggccctgcgcactttccgtgtgctg
agagctgtcaagaccatctccatcttcccagggttgcggactatcgtgaacgccatgctg
cgcgccatcaagatgcttctggaggtggtgctgatgacgctcttctgcctgctcgtcttt
tccctggtgtccgtgcagctctacaggggctctctgcgccaaaagtgtgtcttcaacccc
cagctccttgagcaccagacgaaggtctacgaggactacggctatttttaccgcaggatg
cttcacgacccccgcaactgggcattggacaccaacggcaactacatgctttgtgggaac
gccactggcgccggggcttgcccccttaactacacgtgtcagcccaacattggagaaaac
cctgactatggcttcatgaacttcgacaacgtcttctggtcggccctgatcacctttcaa
ctcatgaccatcgacttctgggaaaacgcctaccgcaaggtgctgctgacaaatggagca
ctaactgtgctgtttttcatcatgacggtgttcttcggctccttctacctgatgaacctc
atgcttgctgtggtggccatcacgtaccaggaggaggctgagcgaaccaacaaggagatt
gagagcgagacgaactccaagcggcagcgcaagcaagcagctgccaccttctacaacatg
accaagatggctaaaaagcagagcgtctgggccaagctcattcacgagaacaaggcgaag
gagaaagagaaagacaagcagatggagaccccgctgcagaaacttatacgagtgaaaaac
accatcaacaggtggaagaagagcaatgtaccgaaggagttgcccgtggacccggagtac
atagttaactttgagccctatgccacagagaaacgcacggcaacctacgtcgctcagaac
accaagtactttgtaaaaaaatggtgtgacttcatcgatagggctaagaagagggaggca
tccaagtgggccgtgcacaaggagcgcctcctaaacgttcacgggatctccttgtcgtca
gcgtcaggcacgcctcacatagaggtcacggccaccgaaactccggcaaaaatagctccc
tggaagcaggccgacaagcagtccacctctgacagtcgccctgcgtcaaccttcggcgcg
ctaaaactcaaaaatgtcattgaggagggaagaaagaccgaagggctagctgaagcgagc
acaacagcgcaagacgccaagagtccgcaggaaagacctggtactaatgaaggcgacacg
gagaaacagaacgggccgaaaactaccaaaagcacgcctcacatcaaggtcacggccacc
gaaactccggcaaaaatccctctctggaagcaggccgacacgcagtccacctctgcgagc
acaccagcgcaagacgccaagagtccgcaggaaaggcctggtacttatggaggcgacaag
gagaaacagaacgtgcggacaatttccaaaaaagaagtaaaaccggacagtgtaaacaaa
aacacgaacatgaaggccggggagaacagagagcaggataacacggacagtccagctggt
gacaacaaacaaaatgaccactgcgaaggtctaagcagcaggcagggggagagctgtcaa
cttaggcgtggccagaacgatgcgcgtgccacagggttcccaaagaatgaggacgtgaac
acgaacgccaagaatctggagaccggagcaggcctgaaggatgagatccaggcccttgac
aagaacaccgatcaacacctacagtctgttctccacaaggattcggtcgatccgcgtcgc
ttgcccacaccaaacccaaaggcgttcgtgctgtccgatgttgtcgtggaggcacacaag
aaggccgtcaagctggagtgtgagctgtccttttgcaacttggatgcggactcggaggac
tacgagcttgagcagaatgcacggccgcgcaactggtgctgcaagataatctggtaccgc
tgccccaccctctttttcatcatgaagcgagccgtgcgcaggacacgccgagtcatccgc
agcacggtggcagacatcttctttgatctcttcatcaacttctgcatcgtcgtcaacacc
attatcatgtcctccgagcatcacggacagtccacgcaactcgacaccatcatttcagac
ggcagcgtcatcttcacggtgttgttcgcaatggaggctgtgttgaagatcgtagggcag
gggttcaggggctacttcgccagcaggtggaaccgcttcgacttcctcattgccgtcatc
agcatcgtcagcatcgtgctggaaaaacagaacatcaatggcacacagttcctcagggca
ttcaggctgctgagagtgctgaagctagcccaggtgtggcccgccatgaactcgctgttg
atgatcatcggatccgccctgggcgcgttgggtcagctgacctgcatcctcctcatcatc
ctatacatcttcgccatcgtcggcctccaactgttcaaggagaagtacaccgagtacaac
ttcccctcgggggtgcccaggtggaactttaacgacttttttcactcgttcatgatgatg
ttccgcgtgctgtgtggcgagtggatcgaggctctgtgggactgcatgcggatcacagag
gtgcacgacagcgtctgcatgctcgtcttcttccccacgctcatctttggaaactttatc
gttctgaacttgttcttggccttgctgctgaacgcgtttggcgaggacgagaacagtcag
aaggactcgcggggcacgaaacgcctgcatgaggcaaagaagcgcatcaagaacaagttt
cgctggttgctggactgctgctgcacccacaccatgaacgtcgtcgtgcacaagcctata
aaagacgccctgccttttgagggggagaccaaccccgccgtccctactccgaaacgttca
gtcaagccacctgcacaagtgccggggggacctcggcgcactagctcaaaaacagcgaag
acctcccatactgatctccgcaaagtcatgtctggcacgagtaacgctctacaacccaac
gaaagcagtcgtacatcaacaacaatgtactctttcgtacagaagaatcggcggcaaggg
atcacgatggaactgattgaggtgaagaaaaagcaaaagttcccacagtgcgaaggggcc
gagcctccttcttgtttcccggacctggttctctttcatgtctttggcgcacgagagtgg
tttaacaacactacctacggaatttattggatgaaacttcgatctgcggtgatgaagctg
gttgacaatgatatatttgagtacggtatactctttctcatcctcgcaggcagcgcgaca
ctggggattgaggactacgattaccaattattacccgatactgcacctttgaagaagatc
acgcttatggtcaataacgtgttcgccagtctctttttggctgagatggttctgcgctgg
ctggcctttggcctcacacgatacttcaccagtgtctggaccatcatcgattttatcgta
gttatggtttcgatgacctccatcatatccaaggactactttgatgaattgccgtccatc
cgggccttagtggcgctgcgagctctgcgtccgttgagggtgatcagcaggattcagggc
atgaagatcgtggtgaactctctgatgcgcgccatcccagccatcctaaacgtgttcatg
gtcagcctggtcttctggctcatcttctgtgtcatgggcgtgcagttcttcgcaggcacc
ttctacaagtgcatcgacatcaacaccgaagaaaaaatcgacgtgttgaccaaggcagag
tgtctcgctaccaataactcctactggttcaactcacacatcaactttgataacgtgggc
aacggattcctggcgctcttccaagtggccacctttgagggatggatggagatcatgcaa
gatgctgtagattctgtaggagaggattttcagccaatctttgaaaattcgctgtacacg
tacctgtactttgtagccttcatcatctgtggctcgttcttctccctcaacctcgtcatc
ggcgtcatcatcgataactttaacgctcttaagaaaaagtacgaaggcagctacctggac
gcctttctgaccctcaaccagcgcaactactacaacacgctgaaaaagatgagtgctcgc
aagccacagaagatcatcacgccaccaaagtatcggttccagaaaatattttacgagctg
tctgtgagcgatcggtttgagctgatcctgatgactgtcgtgttcctcaacatgatcgtg
atgggtgccgagtactacaagtacgtcataccatgcgcttggcgtgaggtgatgttcatg
ttggagatagcgttcagcacattcttcacgctggaagctctgctgaagatcgtgggtcta
agacagcactacttcacggtaccgtggaacgtatatgacttcactgtggccgtcttttcc
ttcaccaatgtggcagtccattcgtacagcctggtcgttcatgacaaccaggcagatgcc
aaagccggcttctatgaaggcagcctgctctttcctcccacgttcctccgactgcttcgt
attttccgaatcagtaaagtccttcgtatcattaaggtggcgaaaggtctgcggaaagtg
atgttctcgctggtgatctcgctgcccgctaccttcaacatcatggccttgctgatggtg
tgcctcttcatctacgccatcttcggcatgttcctcttccacaacgtcaaactgacgggc
gcgctcacgccgcacctgaacttccggaccctgaagaactcggccctcctgttgcttagc
ctctccacggccgctggctggaacgacgtcctcgacccgctcctcatacaggagccattc
tgcaacaacacccacgtcctgctcgccagcggcaagtggaaaagttctgaagatggtgac
tgcggcaacttctggtttgccatcccctacatggtgtcctacatcatcctcacctacctc
ttcatcatcaacatgtacatcgccgtcatcctggagaactaccagcaggctcaccagcag
gaagaggtgggtgtaacggaggacgactttgacatgttctactcggtgtggcagcgctac
gaccctcacgccacacagttcattccctaccaaatgttgtcggactttgtagctgacctt
gacgctccgcttggcatcgagaagccgaacgagatcgccctggtgtccatcaacctgccc
attctgcagggagaccgtgtccactgcctggacatcctcctcgccctcgtcaagaacgtg
cttgcggacatcgaggagagcgaggagatgagtcagctgaagcagcagatcaacaccaag
ttcaccacccgcttccccagcagggcgcgcatgaacgtcatctccaccaccatgcagcgc
aagaaggaggacgtggcggctcgcaccctgcagagggcgtggcaggttttcaagacgcag
caggcaatctactccatcatgaagctgtcggtgaaggacacgcagactcccggcgcctcg
tccatgccccgcacgacgcccacggtggacgagcttggacacaatgtgacgctggcctat
gccaagcacatgacgggtctgatgcaactggcagagcagaaaaagaacgcgggttctgat
cgctccatcaacatcaccgaaatgcgcaacaaggcagacttggacgagacgccgccagtc
atttaa
DBGET
integrated database retrieval system
