Littorina saxatilis: 138948420
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Entry
138948420 CDS
T10665
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM45-like
KO
K12021
tripartite motif-containing protein 45
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsax04121
]
138948420
Ubiquitin system [BR:
lsax04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138948420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
zf-B_box
zf-RING_UBOX
zf-C3HC4
ANCHR-like_BBOX
zf-C3HC4_2
zf-C3HC4_4
Ig_GEX2_N
zf-C3HC4_3
RING_XB3-XBAT31
GCIP_N
zf-RING_5
Snapin_Pallidin
Mce4_CUP1
Apolipoprotein
DUF1664
Motif
Other DBs
NCBI-GeneID:
138948420
NCBI-ProteinID:
XP_070176055
LinkDB
All DBs
Position
LG15:8148285..8167483
Genome browser
AA seq
1025 aa
AA seq
DB search
MSMLTRLKNSFRKNNGRVSETAGRNGPASPKTGRSSLSSPKTGRSSLSSPKTGLSAEGQS
RSGNMTDVKAMLKAEDGDSAKDGSVQNAFGVEQNTSGNTSIQDDFETERNTDEKNTSGQN
AATSAQNISSQSSTHQNISARNNSTQNSSPSKSNSSNNISSSTSLQSSSSSLTMTSQRKS
KSSSLVDTAEDVEHDDATCPKSNNTPVDDSDESYDNLPFADARDENVLDTTHDISFKDTE
STMENVEHSEEFSTEGLAAETFSEIPDGDCGLRRTARSSEIPDEDYNLRRTAGSANPNRA
SFGANLQEVLGRAEEAGSLKNSGKAGMLEDTSAKIKRLTNSFKADNVVREESAADPVTSG
GVLVQPNRANPIAAAACVIPQTLKKSPSTPMLGLHRRPAEDLTCRVCNELFKKPRILPCL
HTFCTTCVINLQTYPINVLEERSHTPRDLNPEADSRELLSPSPVQGSTSSASTFSQKSGS
SHKSSDSSTKNEDQQRSGKRVVLCPTCLKETRVSRTVEELPRNYVMERRVAEDVAARGGV
IRLECDSCAEFSESTRVTVRCMDCAENLCSLCELAHRRQKKTKRHQLIDVTPNQTSENSP
VPQHTSQTNGNSSSNHRDRKNHVLSKVPPPRQINCNRHPEEELKLFCMSCDLPICRDCVV
VDHRDHDCQFLCQELFRQQMSEVQQMIRSVVPRITAVDQQLKKVSDTQDAIRSRADDVIN
EINQHMDTYLSAIQQHRQRLLQQVGAVVEEKQHALHVTERHLRHVRSDVEQTCRFVSDMI
ENASDVEILSVKRLVTDRLTGLKQLVTGVQHQPVSTFLKFSSSEKGEVVNKFQMFGRVIS
RKASAAASTIFTEGLSTARVSHDSSVVLRVNSEDGAQYTGKDVQIKAWLIFQNQSIRSRP
VGIHLQKNGTYSLKFTPVQQGSHFLHVAVDSQPVKDSPFKFKVKAQWRQHKGVWQCCTMC
SSGGRMDVPCGCRGTMPGGQSQGCSHGQPGHPGGQHWSCCGKMVRTSECPGVPMPRQSPV
RQVTL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgttgacaagactcaaaaactcctttcgtaaaaataacggccgtgtttcagaa
acggcgggaaggaatggacccgcttctccgaagaccggtcgttcttcgctgtcgtcacca
aagaccggtcgttcttcgctgtcgtcgccaaagaccggtctttcagccgaaggacaaagc
aggagcggaaacatgactgacgtgaaagccatgctgaaagcagaggacggagattcagcg
aaggatggaagtgttcagaacgctttcggcgttgagcagaacacttcagggaacacgtcc
atacaggacgattttgagacagaacggaacaccgatgaaaaaaacacttccggacagaac
gccgccacgtccgcacagaacatttcctcacagagtagcacacatcagaacatctctgcc
aggaacaattcaacacaaaacagttctccctcgaagagcaactcttctaacaacatctcc
agctccacgagcttgcagtcatcttcgtcgtcattgacgatgacgtcacagaggaagagc
aagtccagcagcttggtggacacggcggaggacgttgagcacgacgacgcgacgtgtcca
aagtccaacaacacccctgtggacgacagtgacgagagctacgataacctcccctttgct
gacgcgcgtgacgagaacgtgctggacaccacgcacgacatctccttcaaggacactgaa
tccaccatggagaacgtcgagcactcggaagagttctccaccgagggtttagcagctgag
acgttttcggaaattcccgatggagactgtggtttgaggcggacagcgagaagctcggaa
attcccgatgaagactacaatttgaggcggacagcgggaagcgcgaaccccaaccgagcc
agtttcggggccaacttgcaagaggttttgggcagagccgaagaagcgggaagtttgaag
aactctggtaaagccggaatgcttgaagacacttctgccaagataaaaagacttacaaac
tcttttaaggcagacaatgttgtgagggaagaaagtgccgcagaccctgttacaagcgga
ggagtgctagtacaaccgaacagagcaaaccctatcgcggcagctgcctgcgtcatcccc
cagaccctgaagaaatcgccctcgacccccatgctgggactccacagacgccccgcagag
gacctgacctgcagagtgtgcaacgagctgttcaagaagccgcggatcttaccctgtctt
cacacgttctgcaccacctgcgtcatcaaccttcagacctaccccatcaacgtgctggag
gagagatcccacaccccgagagacctcaaccccgaggcggactcacgagagcttctctct
cccagccccgtgcaaggatccacatcgtcggcgtccactttcagccagaagtccggcagc
agtcacaaatcctcagactcgtctactaagaacgaggatcaacagaggagcgggaagaga
gtggttctgtgtccgacctgtctcaaagagacgcgggtttcgcggacggtggaagaactt
cccaggaattatgtgatggagaggagagttgcggaggatgttgctgctcggggaggcgtg
attcggctggagtgcgattcctgcgccgagttcagcgaatcgactcgggtgaccgtgagg
tgtatggactgtgctgagaatctctgctccctctgcgagcttgctcatcgacgtcagaag
aaaacaaaacgtcatcaactcattgacgtcaccccaaaccaaacctctgaaaactctcct
gttcctcaacacacttcccagaccaatggaaactcatcatctaatcacagagacaggaaa
aatcacgtgctttccaaagtcccgcctcctcgccagatcaactgcaaccgccatccagaa
gaggagctgaaactgttttgcatgtcatgtgacctgcccatttgccgagactgcgtggtc
gtggatcatcgagaccatgattgtcagtttttgtgccaagaactatttagacagcagatg
agcgaagtgcagcagatgatacggtcagtggtaccccggatcacggcagtcgaccaacaa
ctgaaaaaggtctcggacacccaagacgccatccggtcacgtgccgatgacgtcatcaac
gagattaaccagcacatggacacctacctgtccgccattcaacagcatcgtcagcggctg
ctgcaacaggtgggggcggtggtggaggagaaacagcacgcgctgcacgtgacagagaga
catctgagacacgtgcgctctgatgtggagcagacatgtaggttcgtgtctgatatgata
gaaaatgcatcggacgtggagatcctatcggtcaagcgtctggtaacggaccgcctgacc
ggactgaagcaactagtgaccggtgtgcagcatcaaccggtcagcactttcctcaagttt
tcctcctccgagaaaggagaggtcgtcaacaagttccaaatgttcggcagagttatctcc
cgcaaggcttctgcggctgcgtcaaccatcttcacagaaggtctcagcacagcacgggtg
agtcacgatagctcagtggtgctgcgtgtcaacagtgaagatggcgcccagtacacaggc
aaggatgtgcagatcaaggcatggctcatcttccagaaccaatccatcaggagcagacct
gtgggcatacacctgcagaagaacggcacctacagtctcaagtttacacctgtgcagcaa
ggctcgcactttctgcacgtggctgtggatagtcagcctgtcaaggacagcccctttaag
ttcaaggtgaaggctcagtggcggcaacacaagggggtgtggcaatgctgcaccatgtgt
tcctctgggggacgaatggatgtgccgtgtggatgcagagggactatgccgggtggtcag
tctcaaggctgcagtcacggccagcccggacaccctggggggcagcactggtcctgttgt
ggcaagatggttcgaacctccgagtgtcccggtgtacccatgcctcgtcagtcccccgtc
aggcaggtcaccttgtga
DBGET
integrated database retrieval system
