Littorina saxatilis: 138948669
Help
Entry
138948669 CDS
T10665
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1-like isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsax04131
]
138948669
Membrane trafficking [BR:
lsax04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
138948669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
RasGAP
DUF5601
Motif
Other DBs
NCBI-GeneID:
138948669
NCBI-ProteinID:
XP_070176355
LinkDB
All DBs
Position
LG15:16137913..16185233
Genome browser
AA seq
1654 aa
AA seq
DB search
MSLTSDLAELGQHLQNERLFVSTEKEQLQRLYENLRQTSERLLHVAWIGRQQKAILGTCL
THGSDTKAVDVCGRSNEVENTNFVDSYKHFSHHDSKYGDLLKFLWENPATVGQCIYEGEK
MGFPGMDHVITTITASVYGGCMFREDESAMLSILKLLTELQVANDDNPRRLLRRGNCAFS
LMYKQLCDSLFSARLFLTAALHEPIMRLLMEEEWFYDIDPSKALVRFPPKDRLKRFGEAG
TEEHKVKQSNYRTFIVDKLVTLTTRFISSIKANLHCFPPSLAWLVGQVFTALTASGNVDQ
TEVRSACADLVFALFICPAICDPEPYGITSDIPISHITRHNLMQIAQIIQVLAISHWDDI
DPKVKDLYSRFEKGCMSSVLDFFLDGSWDDAVLSPGLAPPNLPMRSAMLMTPSDVKQLIA
FLRQTSNVLDDKHPAKKQMEATLATLPQDIPPSPVDCFGATSPSNSLNIDPTVNASGTLS
APDTPGSQRKMFRGKTHKKKNSTVNAPPIFDEGMGDTGEREKLSAPEDVLVITVVPPADC
PGMIPEKKVLAWEYENRRRKVKYPSSVSDTISVPAAETQEKRTRFSLSHDQESIGNASDG
PEALSEAASSHSVDENELDNFSDMMSANVSGRGSPSISGRDTPLSQAESVEENRNGTAEL
PVPVPETVQKQNRVDVTDRFGKFELERDEIKSTVSDTWSTDVLASDSETTDQNQLDRLEE
VAEDNFMRSFNMLGNRDPEPVSEISETASDAWSTDVLASDTDEKNSERLRELEDQDEVSS
IVDRDEADSSLGNEDVRADDDPGLEALGAVGGAPTSDDLGDVFHMSNEAAKPAREEPADT
PKKTPFPGPKSLHPPQFHRTSGQGGRQSDPHHVVRNRAWKDRHSDGAYDRRTYHGPFPQR
PMNPGVNLWVSTNGQLSGNGATDKAMMSGSAPQSSGLVDNAPPPSAPSRRPTDKKVEMRH
PQPQPKEDRTSQDSGNPLIEITEALRSPGSGSSTATATVENPENPESLADLDPADALMLS
EQQNSRIDESRLSTALSMFDPFSSEGDGDASTLSTNANNNRSIETLKEDSAFAVSSGAGD
NLANMSSRSVDSAIELLCEDDSAFKEVKVNGGAAGVSVEDKGKGALQKGMGSTAPVAGSG
AGFLQRDSPDNISLRSDDKDFTDGDESDRANKKGSGFFKTFRDKLHKGIKRKTTKLDKDL
LDAQDDASRNNRGEGEGSDTGSCKVETSDDILAKYRTPKKGTGKHGSGNENSDQGQDLAQ
NGAGEEEKLAAAQVEENTPFFDPSNLEGCFAFQDAKRKLRLVLSMCEIQPGFSQQMQSQS
PRPASGSPREHELVYLLKAQLAEAVNLQNKDLVTRLHEVIRCIKLFDADGCKKLLKSLRE
EYRNRAAYISYLVRCRQGLLSAVSHLQKMLNRVERDKEIIGKHLINVCVRLFIERHEKRV
LQFIAMFQKLEMADEKTHLVETFLREMYNDMMQDDLWKAASEVQLDLGQAAIERLLMSRI
YSHAMFPNADGDILRDQLTQQHIRKLSGLMSPTHKDLRIPRVYHFECPWPAAQHEILMIN
AYKTPKDKLKCVLRCSQTIMNLLSLANERSVPAADDFMPVLIFVLIKANPPCLLSTIQYV
ESFYKNRLHGEEQYWWMQFSSAVEFIKTMDYSAT
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgagtctaacgtcggacctagctgagctgggccagcacttgcaaaacgagcgtctgttc
gtttcaacagaaaaagagcagctccagcgcctgtatgaaaatctgcgccagacgtcagag
cgcctgctacatgtggcatggatcggccgtcagcagaaggccatcttgggcacttgtctg
acgcacggcagtgacactaaggcagtggatgtgtgtggtagaagcaacgaagtggagaac
accaattttgtagactcttacaaacattttagccaccatgacagcaagtatggagatctc
ttgaaatttctgtgggagaaccccgcgacagtgggacagtgtatttatgaaggggaaaaa
atgggatttcctggcatggatcatgtcataacgacgataaccgcttctgtgtacggcggt
tgcatgttccgggaagatgagtcagcgatgctgagtattctgaagcttctgacagagcta
caggtagcaaatgatgacaatccgaggcgattactacggaggggaaactgtgcgttctcc
ctcatgtacaagcagctgtgcgactcgcttttctcagcgcgtctctttctgacagcagcg
cttcacgagccaatcatgagacttcttatggaagaggagtggttctatgatattgatccg
tccaaggccttggtgcgctttccgcccaaagatcgcctgaagcgttttggggaagcaggc
acggaggagcacaaagtgaaacagagcaactaccgcaccttcattgtggacaagctggtg
accttgaccacacgcttcatctccagtatcaaggccaacctgcactgcttccctccgtcc
ctggcctggctggtgggacaggtgttcaccgcactcaccgcttctggtaacgtggaccaa
actgaggttagatcagcttgcgccgatctggtgttcgcgctgttcatctgtccggccatc
tgtgaccccgagccatacggaatcacgtccgacattcccatcagtcacatcacgcgccac
aacctgatgcaaatcgcacagatcatccaggtcctcgccatctcccactgggacgacatc
gaccccaaagtcaaagatctctacagccgctttgaaaagggctgcatgtcatcagtgtta
gactttttcctggatggttcatgggatgatgcagttctctcccctggcctggcgccgccc
aacctccccatgcgttctgccatgctgatgaccccgtctgatgtcaagcaactgattgca
ttccttcgtcaaaccagtaacgttcttgacgacaaacaccccgccaagaaacagatggag
gccacgctagccactctcccccaggacatacccccctcccctgttgattgttttggtgcc
accagtccttcaaacagtctcaacatagatcctacggttaatgcgtctggaactttgtca
gcaccagacacccctggcagccagcgaaaaatgtttagaggaaagacacacaagaagaag
aattctacagtcaacgcacctccaatattcgatgaggggatgggggacacaggcgagagg
gaaaagttatctgcccctgaagacgtcctcgtcatcacagttgtgccccctgctgactgc
cctggcatgattcccgagaaaaaggtccttgcctgggagtatgagaatcgacgccgcaaa
gtgaaatacccttcatccgtgtcagacaccatttcagtccctgccgcggagacccaggaa
aaaagaacaagattctctctgtctcatgaccaagagtcaataggcaatgccagcgatggt
ccagaggcgttgtccgaagcagcttccagccattcggtggatgagaacgagctggacaat
ttctccgacatgatgtccgccaatgtcagcgggcgtggctcccccagtatcagcggtcgc
gacacacccctctcgcaggctgaaagcgtggaagagaaccggaatgggactgctgagttg
cccgtccccgttcctgaaacggtacagaagcagaaccgtgtcgatgtgacggatcgcttt
ggcaagttcgagcttgaaagagacgagatcaagtcgacagtgagcgacacgtggagtacg
gacgttctggccagcgactcggaaacaacggaccagaaccagttggacaggctggaagaa
gtagcggaagataatttcatgcgttcatttaacatgctggggaatcgcgacccagagcct
gtctctgagatctcagaaacagccagcgatgcctggagcacagacgtactggccagtgac
accgatgagaaaaactctgagcgacttcgagaactggaagatcaggatgaagtcagcagc
attgtggaccgggacgaggcggacagttcccttggaaacgaagacgtcagagcagatgat
gaccccggccttgaagccttgggagcggtgggaggggcaccaacctcagacgaccttggt
gatgtctttcacatgtccaacgaagcagccaaacctgcccgtgaggagccagccgatact
cccaaaaaaacacccttccctggccccaaatcactccacccccctcagttccaccgcaca
tccggccagggagggaggcagtcagacccgcatcacgtggtgcggaaccgagcctggaag
gaccggcactctgacggcgcttacgaccgacgtacctaccacggcccgttcccccagcga
cccatgaaccctggggtcaacttatgggtcagcaccaacggtcagctgagcgggaacggt
gctacagacaaagcgatgatgtccgggtcagctcctcagtcctccgggctggtggacaat
gctccccctccctctgctccctctcgacgccccaccgacaagaaggtggaaatgcggcat
cctcaaccacagccgaaggaagaccgcacctcgcaggacagcgggaaccctctgatcgag
atcacggaagctctgaggagcccgggttctggctccagcactgccacagcgacggtagag
aacccggagaacccggaatctttagccgaccttgaccccgctgatgcgctgatgctttct
gaacagcagaattcgcgcattgatgaaagccgcctgtctaccgctctcagcatgtttgac
ccgttctcgtcggaaggggatggggacgcttcaactctcagcaccaacgcaaacaacaac
cgcagcattgagactctgaaggaagactcggcgttcgctgtgtcatccggcgctggggac
aatctggccaacatgtcgtcgcggtctgtggacagtgcgatagaactgctgtgcgaggat
gactctgccttcaaggaggtgaaagtgaacggcggagctgctggtgtgtctgtggaggac
aaagggaagggtgcgctgcaaaaggggatgggatcgaccgcacctgtcgctgggtcgggg
gccggttttcttcagcgcgactctcctgacaacatctccttgcggtcggatgataaggac
ttcactgacggcgatgagagtgaccgtgccaacaagaaaggctctggtttcttcaaaacc
ttccgggataagctgcataaaggtattaaacggaaaaccacaaagctggacaaagatctc
ttggacgctcaagatgatgcttcacgcaacaatcgcggggaaggggaaggaagtgacact
ggcagttgtaaagttgaaacatccgacgacattttggccaagtacagaacccccaagaaa
ggaacaggaaaacatggatcaggcaacgaaaactcggatcaggggcaggacttggcacag
aacggagcaggagaggaggaaaaactggcagctgcacaggtggaagagaacacgccattc
tttgaccccagcaaccttgaaggatgcttcgcttttcaggacgccaagaggaagctgcgt
ctggtgctcagcatgtgtgagatccagccaggattttcgcagcagatgcagtcccaaagt
ccgcggccggccagcgggtcgccacgggaacacgagctggtgtacctgctgaaagcccag
ctggcggaagcggtcaacctgcagaacaaggacctggtcactcggctccacgaggtcatc
cgctgcatcaagctctttgatgctgatgggtgtaaaaagctgctgaagtcattgcgtgag
gagtacagaaatcgagctgcttacatatcctatctggttcgctgtcggcaaggacttctg
tcagccgtgtctcacctccagaaaatgctcaatagagtggaaagagataaggagatcatc
ggcaagcatctcatcaacgtgtgtgtgcgcctgttcattgagcgccatgagaagagagtt
ctgcagttcatcgcaatgtttcagaaactggaaatggctgacgagaagacacacctggtg
gagacctttctgagggaaatgtacaacgatatgatgcaggatgacttgtggaaagctgcc
tctgaagttcagcttgacctggggcaggcggccatcgagcgcttgctgatgagtcggatc
tactcgcacgccatgttccccaacgctgacggggatatcctgcgagaccaattgacgcag
cagcatatccgcaagctgagtggcctgatgtcaccgacgcacaaagacctacgcatccct
cgcgtctaccactttgagtgcccctggcccgctgctcaacatgaaatactcatgatcaat
gcttacaagactcccaaggacaaactgaagtgcgtgctgcgctgctcgcagacaatcatg
aacctgctcagcctggctaacgagcgctccgtgcccgccgctgacgactttatgcccgtc
ctcatcttcgtgctgatcaaggccaatcccccttgtctcctctccaccatccaatacgtg
gagagcttctacaagaaccggctgcacggcgaggaacagtactggtggatgcagttcagc
tcggccgtcgagttcatcaaaaccatggactacagcgctacgtaa
DBGET
integrated database retrieval system
