Littorina saxatilis: 138948969
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Entry
138948969 CDS
T10665
Name
(RefSeq) retinoic acid receptor RXR-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
lsax Littorina saxatilis
Pathway
lsax04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138948969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lsax03000
]
138948969
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lsax03310
]
138948969
Transcription factors [BR:
lsax03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
138948969
Nuclear receptors [BR:
lsax03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
138948969
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Tubulin_C
DUF6681
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
138948969
NCBI-ProteinID:
XP_070176755
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Position
LG15:26806559..26963578
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AA seq
473 aa
AA seq
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MVANYNPRQTESTLNGLYIPSITDTLDNSGPGPGGMPGMHMGHSSMMGQHQQDVKPDINA
LNNYPFGFGHAGMPGLPTSSQPSPGGPGSMTSQMHSPTSSMGSPPMMCLSPTGTSSPGMP
HSSLHNKHICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACRDDKNCMIDKRQRN
RCQYCRYMKCLSQGMKREACLSTAVQEERQRVKEKGDGEVESTSGANSDMPVEQILEAEL
AVEPKIETYIDAQVVAKGASEGVKMDTYVDVQKDPVTNICQAADKQLFTLVEWAKRIPHF
TELPLEDQVILLRAGWNELLIGGFSHRSIEVKDGILLATGLHVHRSSAHQAGVGTIFDRV
LTELVAKMREMKMDKTELGCLRAIVLFNPDAKGLQAVQEVEQLREKVYASLEEYCKSRYP
DEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLENPSPQT
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccaactacaacccgcgccaaacagagagtactttgaatggattgtacatccca
agtatcacagacacgctggacaacagcggaccagggccaggcggcatgccgggcatgcac
atgggccactcgagcatgatgggccagcaccagcaggacgtcaagccggacatcaacgcc
ctcaacaactaccccttcggcttcggacacgccggcatgccggggttacccacctccagc
cagccctcacccggcggtcctggcagcatgacgtcccagatgcactcccccacctcctcc
atgggctcaccccccatgatgtgtctcagccccacagggacctcctcccctggcatgcca
cattcctctctccacaacaaacacatatgcgccatctgcggcgacagagcctccggaaag
cattatggtgtttacagttgtgaaggctgcaaaggttttttcaagaggacggtgcggaaa
gacctgacgtacgcctgtcgagacgacaagaactgtatgattgacaaacgacagcgcaac
cgatgccagtactgccggtacatgaagtgtctgtcacagggcatgaaaagagaagcgtgt
ctgtccacagcggttcaggaggagcgtcagagagtgaaggagaagggggacggtgaagtt
gagagcacatcgggggccaacagtgacatgcctgtcgagcaaatcctcgaggccgagctg
gctgtcgagcccaagattgaaacctacattgacgctcaggttgttgccaagggtgccagt
gagggagttaaaatggatacctacgttgatgtacagaaagacccagtgacgaacatctgc
caggctgcggacaagcagctgttcacactggtggagtgggccaagcgcatcccacacttc
accgagctgcccctcgaggaccaggtcattctcctcagagcagggtggaacgagctgctg
attggcggcttctctcaccgctccatcgaggtgaaggatggcatcctgctggccacgggg
ctgcatgtgcaccgcagcagcgctcaccaggcgggcgtgggcaccatctttgaccgtgtg
ctgacggagcttgtggccaagatgagggagatgaagatggacaaaacggagctgggctgt
ctgcgtgccatcgtgctcttcaaccctgacgccaagggactgcaggcagtgcaagaggta
gaacagctgagggagaaggtgtacgcctcactggaggaatactgcaagtcgcgctaccca
gacgagccgggccgcttcgccaagctgctgctgcgtctgcccgcactgcgttccatcggc
ctcaagtgcctggagcacctcttcttcttcaagctgatcggggacacgcccattgacact
ttcctgatggagatgctggagaacccgtccccacagacatag
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