Littorina saxatilis: 138949317
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Entry
138949317 CDS
T10665
Name
(RefSeq) retrograde protein of 51 kDa-like
KO
K18585
intermediate filament protein if
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsax04812
]
138949317
Cytoskeleton proteins [BR:
lsax04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
138949317
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
CCDC39
LTD
TPR_MLP1_2
CEP135_N
DUF8429
ATG16
CC_Bre1
LEKR1
ADIP
CEP135_TSGA10_CC
PMD1-like
At4g38062_N
HAP1_N
DUF5798
DUF4140
ODF2_C
DUF4407
HH_AprE
ATG17_like
SKA1
DUF8221
FKBP15
KASH_CCD
CEP131_C
DUF3450
DUF4200
BLOC1_2
Spectrin_Anc-1
NNF2_middle
CASP_C
Baculo_PEP_C
Bacillus_HBL
Tropomyosin
APG6_N
CCDC18_2nd
CC_Liprin_beta
UPF0242
ACBP4_C
Sensor_actino
Mis12
Rod_CreS
SPC25_N
DUF7121
ZapB_rel
Mua
Motif
Other DBs
NCBI-GeneID:
138949317
NCBI-ProteinID:
XP_070177207
LinkDB
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Position
LG15:40355799..40406583
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AA seq
587 aa
AA seq
DB search
MSKSTSQSRYSDEDMSTTYRPKTASKTVMIQRSSGTSRPRSSMYGGSSGGFSMSRSFNPA
VYTQMSATGIADFRGSREREKKEMQDCNERLATYIEKVRWLEAQNKKLEAELEALRNRKQ
EDWKPIRDMYEGELEQARKVIAELSSQKGVQEGRMAGYQDEIQSLRDLIAQYDNNAKDYV
KKIDTLNSQVGEYEGEVTTLRMRCGSLEDEVAKLRALLQKFKDENQRLRSDLDNETAAHI
EQEVLAQTKTEECEFLQDILDKLQLMQQEPITVKGVDMEAYFKGELRHAIAEMQNMYDER
LDAMSIDVESKYAAQMNQLRSGNVRDSMESEHAKGEIKRLRDQLSERSSRIAELESMLAS
IKAERDNFHAQLNELQLELERERTESSRKLSELQQQIEALMQQLSELIDAKMSLELEIAC
YKKLLEGEENRVGLRQLVEQTIGSQGRGAANLSGIIGQSNMSQSTTARTTIQRSSKGSIA
FQSVDPAGACVSIENTSSGARAKTQSLKGWKLVKEVNKSPLATVDLGDRELRPGQTLSLF
AKGAKSKASNDNEIICEIFSWGTGNGKYILNDDNGVEKATLTVTQVM
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtcgacgtcgcagtcccgttactctgatgaggacatgagtaccacctaccgg
cccaaaaccgcctccaagacggtgatgatccaacggtcttcggggaccagccgaccccgc
agcagcatgtacgggggctcctcgggaggcttcagcatgtccagaagcttcaacccagcc
gtctacacgcagatgtcggccaccggcatcgcagacttccgcggcagccgggagcgcgaa
aagaaggagatgcaggactgcaacgagcgtctggccacctacatcgagaaggtccgatgg
ctggaggcccagaacaagaagctggaggctgagctggaggccctcaggaaccgcaagcag
gaggactggaagcccatccgggacatgtacgagggcgagctggagcaggcccgcaaggtc
atcgccgagctgtcgtctcagaagggcgtccaggagggtaggatggctggctatcaggac
gagatccagtccctcagggacctcatcgctcagtacgacaataacgccaaggactacgtc
aagaagattgacaccctcaactctcaggtcggagagtacgaaggggaggtaaccaccctg
cgcatgcgctgtggatctcttgaggacgaggttgccaaactgagggctctcctgcagaag
ttcaaggatgagaaccagcgtctgcgttccgacctggacaatgagacagcagctcacatc
gaacaggaagtgctggcccagaccaagacagaggagtgcgagttcttgcaggatatcctc
gacaagctgcagctgatgcagcaggagccaatcaccgtgaagggcgtggacatggaggcg
tacttcaagggcgagctgcgccacgccatcgccgagatgcagaacatgtacgacgagcga
ttggacgctatgtccatcgacgtggagagcaagtatgctgcacagatgaaccagctgcgt
tccggcaacgtgcgcgacagcatggagtctgagcacgctaagggtgagatcaagcgtctc
cgcgaccagctgtctgagcggtcatcacgcatcgctgagctcgagagcatgctggcttcc
atcaaggccgagcgtgacaacttccacgcgcagctcaacgagcttcagctggagctggag
agagagcgcacagagagctccaggaagctgtcggagctgcagcagcagatcgaagctctg
atgcagcagctctcggagctcatcgacgccaagatgagcttggagctggaaatcgcctgc
tacaagaagcttctggagggagaagagaacagggtcggactcaggcaactggtggagcag
accatcggaagccagggacgtggagcagccaatctttccggaatcatcggccaatccaat
atgagccaatccacaaccgccagaacgaccattcagcgatctagcaaaggatccattgcc
ttccaaagtgtggacccagccggtgcatgcgtctccattgagaacaccagctccggtgca
cgtgcgaagacccagagcctgaagggctggaagctggtgaaggaggtcaacaaatcgccc
ttggctaccgtggatcttggtgatagggagctccgccctggtcagaccctcagtctcttc
gctaagggggctaagagtaaggccagcaacgacaacgagatcatctgtgagattttctcc
tggggaacaggcaacggcaaatacatcctcaacgacgacaacggcgtggagaaggccacc
ctcacggtgacccaggtcatgtag
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