Littorina saxatilis: 138949437
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Entry
138949437 CDS
T10665
Name
(RefSeq) superkiller complex protein 2-like
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
lsax Littorina saxatilis
Pathway
lsax03018
RNA degradation
Brite
Enzymes [BR:
lsax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138949437
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138949437
mRNA degradation factors
3'-5' decay
Ski complex
138949437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138949437
NCBI-ProteinID:
XP_070177363
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Position
LG15:complement(44381828..44414996)
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AA seq
1247 aa
AA seq
DB search
MQKELTEGLDLLELGCHGSMELVARGNAAPAVLPLKTVPVGLPPVLARTQDELEGFLSQP
QCLNIHDLRRSQKYIARERRPERLFHSDVCPVQTTIVVERNPATGELLGYKEECLSDSSK
TSRNSLSLHRMPGPSYTDLRGSSTNYPFWPGGMDEPVLDKLEDREGDSAAINLDTELLTA
APGLADGMTFDTGAADPKPPPPPESNTAPDVINLADILADTDDLDLGDSDEEEAEQKKKD
KENNKESGAVTQLGKSESLENLVQVKEDQTTTEVTKKKTEEKKESWAVKVDVNSPVTEFY
KRVPNMAYKWPFEPDVFQKQAILHLEKHESVFVAAHTSAGKTVVAEYAIALSLKHMTKTV
YTSPIKALSNQKFRDFKTTFGDVGLITGDVQINTTASCLIMTTEILRSMLYNGSDTIRDL
EWVIFDEVHYINDSERGVVWEEVLIMLPQHVNIILLSATVPNHMEFADWVGRTKRKPMYV
ISTAKRPVPLEHFLYTGNSNKTSTELFLLVDAKGSFLTTGYSKAVAAKKERASQSSQSFG
AKGTRGGNPSQDKNVWLSVIEMLKKKDKLPMVAFTFSKRRIEDNINNLQSVDLTTQAEKS
EIHIFFHRCIQRLKGNDRQLPQVLHMEQVLKRGLGVHHSGILPILKEVVEMLFQRGMVKI
LFATETFAMGVNMPARTVVFDSTRKHDGTCMRNLSAGEYIQMAGRAGRRGLDTTGTVIIL
CKGDVPETSELHKMMLGKPTTLESQFRLTNTMILNLLRVEQLRVEDMIRRSFSEFHTQRE
EVNHRKAMEELKGHMSKVKDIECYLCSVDLERYYKACKDYQELKQRLQEVVLSHPAAIKA
LSAGRVVVIDNSRHSNVLGAVLQSSLGSNNTRIFTVLILANRGDNLAAGEITPSDNHRVK
PVKMRQLFIPEGVCWHGVVEVKAADIAVITTKTIKLEADKIVKDVKKREQPRFRDDPPSQ
SVTMVTQELLRLSEQNPEGLSGLDPTKDLHLRDIDLVEQFRSLQFMQEEFGQFQCVNCPK
FDEHFSQISSNMGLKEEYRRLQFLLSDQSLQLLPEYQQRVEMLTRLHYVDAQGSVQLKGR
VACEISNHEVMITELVFDNVLTDLHPADIAALLSSMVFEQKNCSAPELTDTLKQGMEKIL
QKAEEIGRVQKEVGMKIPVGDYKESFHFNLMEVVFEWARGMPFAEITSLTDVQEGIIVRC
IQRLYELLRDVRNAARIIGDPTLFKKMEEAMSIIKRDIVFAASLYTQ
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaggagctaacagaaggcttggaccttctggagcttggttgccatggcagcatg
gagcttgttgccaggggcaacgccgcccctgctgtcttacccttgaagactgtgcctgtt
ggtctaccccctgtgctagcgaggacccaggatgagctggaaggcttcctgtctcagccc
caatgtctcaacatccatgatctcaggcgctcacagaagtacatagcacgtgagagacgg
ccggagcgactgttccacagtgatgtgtgtccggtacagactaccatcgttgttgagagg
aatccggccactggagagctgcttgggtataaggaggagtgcctttcagacagcagcaag
acttcacgcaattccctgtcgctgcaccgcatgcctggtccgtcctacaccgacctccgc
ggctcctccactaactatcctttctggccagggggtatggacgagccagtactggacaaa
ctggaagacagagagggtgactctgctgccataaacttggacacagagcttttgacagcg
gccccagggcttgctgacggaatgacctttgacactggtgccgccgacccgaagcctcca
cccccaccagagagcaacactgcccctgacgtcattaacctggcggacatcttggccgac
acagatgaccttgaccttggtgacagtgatgaagaagaggcggaacagaagaagaaggac
aaagaaaataacaaggagtcaggggcagtaactcagctgggcaaaagtgaaagtcttgag
aaccttgtacaggtgaaggaagatcagacgacgacagaggtgacaaagaaaaagacagag
gagaagaaggaatcgtgggcagtaaaggttgacgtcaactctcccgtcacagaattctac
aaacgagttccgaatatggcctataagtggccctttgagccggacgtgttccagaaacaa
gccatccttcaccttgagaaacacgagagcgtcttcgtggcggctcacacctcggccggc
aaaaccgtggtggccgagtacgccattgctctgtccctcaaacacatgaccaaaacggtg
tacacatcccccatcaaggcgctgtccaatcaaaagttccgagatttcaagacgacgttt
ggagacgtgggtctgatcacgggcgacgttcagatcaacaccaccgcgtcctgtctcatc
atgaccaccgagattctcaggtccatgctgtacaacggctcggacaccattcgtgacctt
gagtgggtcatctttgacgaggtgcactacattaacgattctgagagaggggtggtgtgg
gaagaagtgctgatcatgttaccgcaacatgtcaacattattctgctgagtgcaactgta
cccaaccacatggagtttgccgactgggtggggagaaccaagcgcaagccaatgtacgtg
atcagcaccgccaagcgcccggtgcccctggaacacttcctctacaccggtaacagcaac
aagaccagcaccgaactcttcctcctcgtcgacgccaagggcagcttcctcacaactggg
tacagcaaggcggtggcagccaagaaggagcgagccagtcagagctcgcagagtttcggg
gccaagggaacaaggggaggcaacccgtctcaggacaagaacgtgtggctgtcggtgatt
gagatgctgaagaagaaagacaagctgcccatggtggccttcaccttctccaagcgtcgc
atcgaggacaacatcaacaacctgcagagcgtcgacctcaccacgcaggccgagaaatca
gagatacacatcttcttccacaggtgtattcaacgactcaagggcaacgacaggcagctg
ccacaggtgttacacatggagcaggtgttaaagagaggtctgggcgttcaccacagcggt
atcctgccaattctcaaagaggtggtggaaatgctctttcagcgtggaatggtcaagatc
ctgtttgcgacagagacgtttgcgatgggagtgaacatgcctgcacgcacggtggtgttc
gacagcacacggaagcatgacgggacgtgcatgcgcaacctgtcggcgggtgaatacatc
cagatggcgggccgggcggggcgccgaggtctggacaccaccggtaccgtcatcatcctg
tgtaaaggggacgtgccggagacgtcagaactgcacaaaatgatgctggggaaaccgaca
acgctagagtcacagttcagactcaccaacaccatgattctgaaccttctgcgcgtggaa
cagctgcgtgtggaagacatgatccgtcgcagtttctctgagttccacactcaacgagag
gaggtcaatcatcgcaaggccatggaggagctcaaaggtcatatgtcgaaggtcaaggac
attgagtgttacctttgctcggttgaccttgagcggtactacaaggcctgcaaggactac
caagagctgaaacagcgactgcaggaagttgtgctgtctcacccagcagccatcaaagcc
ctgtcagcgggtcgagtggtcgtcatcgacaacagtcgccatagcaacgtccttggcgcc
gtccttcaaagcagtctgggcagcaacaacacacgcatcttcaccgtccttatcctggcc
aacaggggagacaacctcgctgcaggggaaatcactccaagcgacaatcaccgcgtgaag
ccggttaagatgcggcagctgttcatccctgaaggagtgtgctggcacggtgtggtggag
gtgaaggctgctgacatcgccgtcattaccaccaagaccatcaagctggaagcggacaag
atcgtcaaggatgtcaagaagcgagaacagcctcgcttcagggacgaccccccatctcag
tccgtcaccatggtaacacaggagctgctgcgtctctcagagcaaaaccctgaaggtctc
agtggccttgaccccaccaaagaccttcaccttcgtgacattgacctcgtggagcagttc
cgctccctgcagttcatgcaggaagagtttggtcagttccagtgtgtgaactgccccaag
tttgatgaacattttagtcagatcagcagcaacatgggtctgaaggaggagtacagacgc
cttcagttcttgctgtccgaccagagtctacagctactgccagagtatcaacagagagtg
gagatgctgacacgtttgcactacgtggacgcacaaggctcggtgcagctgaagggtcgc
gtggcgtgcgagatctcaaaccacgaggtcatgatcacggagctggtgttcgacaacgtc
ctgactgaccttcaccctgctgacatcgccgcgctcctctcttctatggtctttgagcag
aaaaactgctcagctcccgaactgactgacacgctcaaacagggcatggagaagatcctg
cagaaagcggaggagattggacgtgtccagaaagaagttggcatgaagatacctgtgggg
gactacaaggaatccttccacttcaacctgatggaggtcgtctttgagtgggcgagaggc
atgccgtttgcggagatcacatcactgacggacgtgcaggaaggaatcattgtgcgctgc
atccagcgactgtatgaactgctgcgagacgtgcgcaacgctgcccgcatcattggagac
cccacgctgtttaaaaagatggaagaggccatgagtatcatcaagagagacattgttttt
gccgccagcctctacacgcagtga
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