Littorina saxatilis: 138949542
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Entry
138949542 CDS
T10665
Name
(RefSeq) DENN domain-containing protein 4C-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsax04131
]
138949542
Membrane trafficking [BR:
lsax04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
138949542
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
138949542
NCBI-ProteinID:
XP_070177502
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All DBs
Position
LG1:complement(108169389..108319463)
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AA seq
1825 aa
AA seq
DB search
MVGSDVYLCYKKAMVKTDVLAYKPTILGRYPEDEHDSFSLPESVPMFCLPMGATIECWDA
KAIHPMPGFSTFILTQSGGDKIYGAAVTFYEEYKESSLSDMQMRLLSLKNRSIREQYGIQ
KTVHVRKAICLLSHWPFFDAFKKFLSQLYKVSISGPHHVPIERHISHFMYDVPYPSPQRP
RILVQLAHDSLSLCMPEDSPLPHSGASFITLLRNLGPELCMNLMLYVLLENKILLHSLRP
TVLTEVAEAVTSMIFPFHWQCPYIPLCPLGLSDVLNAPCPFIVGIDSRYFDLFDPPSDII
CVDLDTNRIYMPEDKKHLNYKIMPKKAVRVLQDSMHRLFEMSTPVNTGPANEEISLEMTN
VDLDFRRKKIQMQMELLIQEAFLRFMAILLRDYKSYLNPIMKQPNNRTTDATVLFDMQGF
VKSRDKTNAKFFTQMIKTQMFVRFIEERSFVSDKDASLAFFDECTEKIDESKEDIRLIEI
DNSKASERTVLIMPPEPTGLPEGATYSYKGFPELKPELFLKKKVSTLSLPSKPLCPNSPV
ARRSKQEVKSAQKLAQQHYGNPKHWAKCLLSHCYSLWFIAFPAFVHTHPKKMEALKIGFA
VLQKMGSHKLPFVDQVCYRVLMQLAGQYNKPGLAVQVYSLMKRHGVQPNAITYGNYNRVM
LEAKWASPMSKGKRRWTKIRNLILGVAQFRRNIRRRSISLHSYSGSEYDQISHASVDSYL
DDHGHKTSVDAVGAVSACKVVFSPDTPVSGGGSAVNGKTPICEDGVTVVAATSTLDDRMR
GVSDGGYNSMTQEDVRRLSQMMSAEGDSLASSPSPTASDPEPPEPQTQTQPKPSILESWN
PLRFSFRQKKRHHSEKHKTDSEQQPDYRARVGSIVRKSISSFTDRDSQQILQGTLLGNSA
GLLMVSQTFVEQGAYLASGDLRLEVESTRGRHKGDPGNGPKPSRSMSLFASWRPRNNGEG
KPAAHMRFSELTRKEEDDVSLSSIQSGDDSHHKLDSDSSSGGRCEVKDSGVGLDEPPTSH
PTSQESVANEEGEQGSEDKEQAAGDNHLQSVAEGKDGCEAEAEASNPEKQSSQSAPSCGS
CNTDSQACVAAEGQSTEQSTSESDSAAAATDSVRTESDGVDGASAGPSSGDNIQVKPASK
AHPPTTLGQVGRTMSSPCTHPPSTPTHPPSVAESRTPVQKQNSLPSQSQRGSEPRKSLPD
KPGEYVMQRSQSLKRGSNDMMQKTNEAITGFFKFASKAASASYSKFNEIKQSITTPIKNA
ASLSSLTRSQDDLEGVGGSERGSIGGYDDDRRSNSSMSGTIRERLRLTDTHDAVSNSDSS
YTEGSGQRLSQTSFGENFGENSLGCAPSPSYLDSFRPAHDVRSDSVSGQSVDVALMAVAM
EVEMSSCSRCSRCHHLVYDEEIMAGWSADDSNLNTTCPFCSAKFVPNLQVYIKDWRGHPR
STPLSLHSNTEALAPPPDSAPPPVSTGHAPLTPTLVAESVEEETFLHADTGEKTISPATA
AGELQSSMHLSDSPLSLQEAEAAVRRRCTSECLSNATDHSSLGGGGYYNCYPGSLGSPLT
LSIDEDVHMPAATTTSTGPEKKKEFMSRGTCTAEPQVFPYLSPLVLRKELEYVMDHEGDL
CLSTPLFLDQHPIIFWNMVWYIRRLEIPSHLSSFLLTAATSNPTQSSNKTSYDSRNILIR
PLWDNVRIHDEVGLPMYIAWDAGHKSTVVDALVTESESFSRPCMYQIISSIQRNDMLAAI
KLVAQGRRRLMGRRRHFRSLYREVLFLSFVACGRENIDHDAFDREFALAFDEKLVPAEVR
RLQTDDKPRSINVQWCRRVFSELDI
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggttgggtcggatgtgtacctgtgctacaagaaggccatggtgaaaaccgacgtgctg
gcctataaaccaaccatcctgggacggtaccccgaggatgaacatgacagcttctccctg
cccgagtctgtgcccatgttctgtctgcccatgggcgccaccatagagtgctgggacgct
aaggccatccatcccatgcccggtttctccaccttcatcctgactcagtcagggggagat
aagatctacggggcggcggtgacgttctacgaggagtacaaggagagctcgctgagcgac
atgcagatgcgactgctgagcctcaagaaccgcagtatcagggagcagtacggtatccag
aagacggtccatgtccgcaaggccatttgtctgctatcgcactggcccttttttgacgcc
ttcaagaagttcctgtcccagctctacaaggtgtccatctccggcccccaccacgtcccc
atcgagcgacacatctctcacttcatgtatgacgtgccctatccatcgccacagagaccc
cgcatcttggtgcagctggcccatgattccctgtcgctgtgtatgcccgaagactcacca
ctgccgcacagtggagcgtcgttcatcacgttgctgcgtaacctgggccctgagctgtgc
atgaaccttatgctctacgtgctgctggaaaacaagatattgctgcattctctgcgcccc
actgtgctcaccgaggtggccgaggccgtcactagtatgattttcccgtttcactggcag
tgtccgtacatccccctgtgtcccctggggctgtcagacgtgctcaacgctccctgtccc
tttatcgtcggtattgactctcgctactttgacctgttcgaccctccgtctgacatcatc
tgtgttgacctagacaccaacagaatatacatgccagaggacaaaaagcacttgaattac
aagatcatgccaaagaaagcggtgcgagtgctacaggactccatgcaccgcctgtttgaa
atgtcaacaccggtcaacaccgggccggccaacgaggagatcagtctggagatgaccaac
gtcgacctcgacttcaggcgcaagaaaatccagatgcagatggagctgctgatccaggaa
gcgttcctacgattcatggccatcctgctgcgcgattacaagtcttacctcaaccccatc
atgaagcagcccaacaaccgcaccaccgacgctaccgtcctctttgacatgcaaggtttt
gtgaagagccgtgacaagaccaacgccaagttcttcacccagatgatcaagacgcaaatg
ttcgtccgtttcatcgaggagcgctcctttgtgtcagacaaggatgccagtctggctttc
tttgacgagtgcacggagaagattgatgaatcaaaagaagacatccgcttgatagaaatc
gacaactcaaaagccagtgagagaacggtgctgattatgccccctgaacctaccggcctg
ccagagggagccacctacagttacaagggattccctgagctgaagccggagctgttcctg
aagaagaaagtgtcgacgctgtcgctgcccagcaaacctctgtgtcctaacagccccgtg
gcccggcggtcaaagcaggaggtcaaatctgcacagaagctggcacaacaacactacggc
aaccccaagcactgggctaagtgtttgctgagtcactgctacagtctctggttcatcgcc
tttccagccttcgtacacacgcaccccaagaaaatggaggcgctgaaaatcggctttgcc
gtcctgcagaaaatgggatcccacaagctgccctttgtcgaccaggtgtgttaccgagtg
ttgatgcagctggcaggccagtacaacaagccgggcctggcggtacaggtgtactctctg
atgaagcgacacggcgtgcagccaaacgccatcacatacggcaactacaaccgggtaatg
ctggaggccaagtgggcgtcgcccatgtctaaaggcaagcggcgctggaccaagatccgg
aacctgattctgggcgtggctcagttccgcagaaacatccgccgccgatccatctctctg
cactcctactctgggtccgagtacgatcagatcagtcatgccagcgtcgacagttacctt
gacgaccacggccacaagaccagcgtggacgcggtgggggcggtgtctgcctgcaaggtg
gtgttcagccccgacactccggtgtccggtggggggagcgcggtgaacggcaagaccccg
atctgtgaggacggggtgaccgtggtggcagccacctcaaccctggatgacagaatgagg
ggtgtgtcagacggcggatacaactccatgacccaggaagacgtgcgacgactgtcacag
atgatgagcgcagagggggacagcctcgcctcctccccctcccctacggcctctgacccc
gaaccgcccgaaccccaaacacaaacccagcccaagccgtctatactggagtcatggaac
ccgctgcggttcagcttcaggcagaaaaagagacaccactctgagaaacacaagacagac
tcggagcagcagcccgactaccgggcgagagtggggagcatcgtgcgcaagtcaatctcc
tccttcaccgaccgcgacagtcagcagatcctgcagggaacgctgttggggaactctgcg
ggcctgctgatggtcagtcagaccttcgtggagcaaggcgcctacctggccagcggagac
ctgcgcctggaagtggagtccaccagggggcgccacaagggggacccgggcaacggcccc
aagccctcccgctccatgagtctcttcgcgtcgtggcgaccgcgaaacaacggggaggga
aagccggcggcccacatgcgcttctccgagctgacccggaaagaggaggacgacgtttct
ctgtccagcatccagtccggggacgactcgcaccacaagctggacagcgactcttcctcc
ggggggcgctgtgaggtcaaggacagcggtgtggggctcgacgaacccccgacctctcac
cccacctcgcaggagtcggtagccaacgaggagggggagcaggggtcggaggacaaggaa
caagctgcgggtgataatcatttgcaatcagtggccgaggggaaggacggctgtgaggcg
gaagccgaggcatccaaccctgaaaagcagtctagtcagtccgctcccagctgtgggtcg
tgcaatacggacagccaggcctgtgtggccgcagagggtcagtccacagaacagtccacc
agtgagtcggacagtgcagctgctgcgacggacagtgtcaggacagagtcagacggtgtg
gatggtgctagtgcaggcccttcctcaggtgacaacatccaggtcaaacccgctagcaaa
gcccacccccccacaacgcttgggcaggtagggagaaccatgagctccccctgtacccat
cccccctccacccccacccatccccccagcgtggcagagagccgcaccccggttcagaaa
cagaacagcctgccgtcccagtcccagcgcggttcggagccgcgtaagtctctgccggac
aagcctggcgagtacgtcatgcaacgctcgcagagcctcaagcgcggcagcaacgacatg
atgcaaaagaccaacgaggccatcacgggattcttcaagttcgcttccaaggccgcgtca
gccagttacagcaagttcaacgagatcaaacagtccatcaccacccctatcaagaatgcc
gccagcctctcgtccttgacccggtcccaggacgaccttgaaggggtcggggggtcagag
cggggcagcatcggtggatatgacgacgatcgccgtagcaacagcagcatgagcggcacc
atcagagagcggctacgactgaccgatacgcacgacgcagtcagcaacagcgacagcagc
tacacagagggctcgggccagagactgtcgcagacgtcctttggggagaactttggggag
aactccctgggctgcgccccttccccatcctacctggacagtttccggccagcgcacgac
gttcggtcggacagcgtgagcggtcagagtgtggacgtggccctgatggcggtggccatg
gaggtggagatgtcgtcctgttctcgctgcagtcgctgccaccacctggtctacgacgag
gagatcatggccggctggtccgctgacgactccaatctcaacaccacgtgtcctttctgt
tccgccaagtttgtccccaacctgcaggtctacatcaaggactggcgagggcaccccagg
tccacgccgctgtcactccactctaacacagaggctctggcccctccccctgactcggcc
cctccccctgtcagtacaggccacgcccccctcacccccaccttggtggcggaaagtgtg
gaagaggaaacgttcctgcacgccgacacaggtgagaagaccatcagcccagcgacggca
gcaggtgagttgcagagctccatgcacctgtccgactcccccctcagcctgcaggaggca
gaggcggcggtccggcggcggtgcaccagcgagtgtctgtccaacgccactgaccacagc
tctctgggcggtggcggctactacaactgttaccccggcagtctcggttcccccctcacc
ctctccatcgacgaggacgtccacatgcctgccgccaccaccacctccaccgggccggag
aagaagaaggaattcatgagcagaggcacctgtacagcggagccccaggtgttcccctac
ctgagtccattggtgctgcgcaaagagctggagtacgtcatggaccacgagggtgacctc
tgtctctccacccccctcttcctcgaccagcaccccatcatcttctggaacatggtgtgg
tacatccgtcgcctggagatccccagtcacctgtccagtttcctgctgactgccgccacc
tccaaccccactcagtcgtcaaacaaaacttcgtacgacagtcggaacattttgatccga
ccgctatgggacaatgtgcgtatccacgacgaggtggggctgcccatgtacattgcgtgg
gacgccggacacaagtccaccgttgttgacgccctggttacagagtcggagtccttcagc
cgaccgtgtatgtaccagatcatctcctccatccagcgtaacgacatgctagcagccatc
aagttggtggcacagggccgcagacgcttgatgggaagacggcgacatttccgcagtctg
taccgcgaggtcctgttcctgtccttcgtggcgtgcggcagagagaacattgaccacgat
gcgtttgacagagagtttgccctggccttcgacgagaagctggtgccggcagaggtccga
cgtctgcagaccgacgacaagccgcgctcaatcaacgtccagtggtgccgcagggtcttc
tctgaactggacatctag
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