Littorina saxatilis: 138951464
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Entry
138951464 CDS
T10665
Name
(RefSeq) paired amphipathic helix protein Sin3a-like isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
lsax
Littorina saxatilis
Pathway
lsax04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
138951464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsax03036
]
138951464
Chromosome and associated proteins [BR:
lsax03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
138951464
REST complex
138951464
Heterochromatin formation proteins
Other heterochromatin formation proteins
138951464
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
HHD_RTEL1
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
138951464
NCBI-ProteinID:
XP_070179160
LinkDB
All DBs
Position
LG16:19124228..19200897
Genome browser
AA seq
1482 aa
AA seq
DB search
MQPRRHDDQQPGQRRVMPSEQFSRVIAPGVPQRFDNNDNAIPTNLAYPITGYGQMTQAPQ
HLPPQQAVHPPVVAAALSAVHQGCVAPAPSVHPPPPHQGGVAAAPPALNQLAQVPQPGGL
GAPPPGPQQQQQFQRLKVEDALSYLDQVKLQFGNQPSVYNDFLDIMKEFKSQTIDTPGVI
NRVSNLFKGHPDLIVGFNTFLPPGYKIEVERDVINVYQPGQASMPISALNAGANAAAAAA
AAAALALQSQPQKSPAHIPSVPAPALSQLPPPPPILHSYTQPPRPTLPDVPIPLPHHTQP
PTAASTSPQGGNQPVEFNHAINYVNKIKNRFQGQPEVYKQFLEILHTYQKEQRHIKEVLG
LGAAAASQKPLTETEVYAQVAKLFVDQEDLLSEFGQFLPDANGGGGGSSLFFGEATAGRR
SSSDMALGVRNDHSSTVKKPGFTSKAPLGKASSQLKRPPSIGSSGLQPPSKMRKTDNAFS
EDVTDGGGFKYKTGILKDVSLAEAGKYASLKEYAFFDQVRVALRSNEVYNNFLRCLILFN
SEVISRSELINMVHPFLGKYPDLYKWFKEFLGHKESGNSSEALPQGTAKERSVRDEYNME
IDYQSCKQYGASYRALPSSYPQPKCSGRTQLCREVLNDTWVSIPTWSEDSTFVTSRKSQF
EEYIYKCEDERFELDVVLEMNFATIKTLEAVQRKMQRMSTEEAAKFRLDNSLGGSSEFVA
KKAICRIYGEKSADIVDGLKKNPVVAVPLVLRRLKAKDEEWREAQKSFNKVWREQNEKYY
LKSLDHQGMTFKQNDIKALRGKSLINEIETILEEQNESNQQGQSMEITEPHITETYEDKS
VFDDAASIIIHNMKRQSNMHHEDKKKIKQLVYHVVRDLLFYPRGDLSDDEDEDTDGDSGD
KKPKDSSSSDAVRGTSVKEEKDGWAESRQNGHDTDLTSCTTGADSSPSDKPAATGKLSQQ
TNGDSVELDLADEDDADDHYTLFYGNTQWYLFFRLHFKLCQRLLHFRRMSEKIAQQEENS
KADRKPSTALALRLRTTFDVEPKDYYSYFLDSIKNLMDCSIESGTYEDTLREMYGINSYL
GFTMDKQVVQIVRNLHHLITEESSTEMTDQFMEEKQNQATGGPLSMRPLRQQAELNYQRR
AENLMADDNCFKFVFYKKSGSVHVTLLDQGGEQGEEVGEMERWAAYVERYVSMAPTDPSQ
NFSQKMVKLLCDKPVFLSRNIASWRRRNMCGQREEEEEEEDMEEEEERGSEEEKEDKEEK
EKKDEDAHSEDALCLDRPKKSTNQNMMNFHLMECVKDVNDGKTMIADGGGVRFTINSLKM
QHICWGAEMWYRRSALQTARKTHSQVSLAKHHKFSRWLDVFHRDKVTTEDDQDCEDWMMG
RVDNIQPCTSTFLIEVDNPNKPPYYPFHRYRVKRRTPSPAPITTSTPTPSIVSSTSPSSI
SSLPQSAPAPSVLPLPLDLQPGGRPSSRPSSRPSSRPSTPAE
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgcagccacgcagacacgacgatcagcagccggggcaacggcgagtgatgccatcggag
cagttttctcgcgtgatcgctcctggcgtacctcagcgatttgacaacaatgacaatgcc
attcctaccaacctggcctaccccatcactggttatggacagatgacgcaggctcctcag
catcttccgccccagcaagcggtgcatccaccggtcgttgccgcggcgctatcggctgtg
caccaggggtgtgtggcccccgccccctctgtccacccaccgcctccccaccaggggggc
gtggctgctgctcctcccgctctcaaccagttggcacaggtaccacagccgggaggatta
ggagcaccccctcctgggcctcagcagcaacaacagttccaacgactcaaggtggaagat
gctctgtcgtaccttgaccaggtgaagctgcagtttggcaaccagccgtctgtgtacaat
gactttctggatattatgaaggagttcaagtctcaaaccatcgacacgccaggggtgatc
aaccgcgtgtccaacctgttcaagggtcaccccgacctgatcgtgggcttcaatactttc
ttacctccaggctacaagatcgaggtggaaagggacgtcatcaacgtgtaccagccgggc
caggcctccatgcccatctccgccctcaacgctggagctaacgctgctgctgctgccgcc
gccgccgccgctttagccttgcagagtcagcctcagaagtcgcccgcacacataccaagc
gttcctgcccccgccctcagtcaactgcccccaccccctcccatcctccacagctacacc
cagccccctcgccccaccctccccgacgtgcccatccccctcccccaccacacccagccc
cccaccgctgccagcacctccccccaaggagggaaccagccagtggagtttaaccacgcc
atcaactacgtcaataagattaagaaccgtttccaagggcaaccagaggtgtacaaacag
ttcctggagatcctgcacacctaccagaaggagcagcggcacatcaaagaggtattgggg
ttgggagcagcagcagccagccagaagccgctgacggagacggaagtttacgcacaggtg
gccaagctctttgtggaccaggaagatcttctcagcgaattcggacagttcctccccgac
gctaatgggggagggggcggcagctctctgttctttggagaggcaactgcaggtcgaaga
agcagcagtgacatggcactgggggtgcgaaacgaccattcctcgacggtgaaaaagcct
ggcttcactagcaaggcaccgctgggcaaggcaagctctcagctcaagagaccgccgtcc
attggaagcagcggtcttcagccccccagcaagatgagaaagaccgataacgccttcagc
gaagatgtcacagacggcggaggatttaaatacaagacgggaattctgaaggatgtgtcc
ctggcggaggctgggaagtacgcgtcgctcaaggagtatgcctttttcgatcaggtgcga
gttgccctgcgctccaacgaggtgtacaacaacttcctgcggtgtctcatactgttcaac
agcgaggtcatctctcgcagcgaactcatcaacatggtgcacccgttcttgggcaagtac
cccgacctgtacaagtggttcaaggagttcctggggcacaaggagtcggggaatagctcc
gaggcgctcccccagggtactgccaaggagcgaagcgtgcgtgacgagtacaacatggag
attgattaccagtcgtgtaagcagtatggggcaagctacagagctctaccgtccagctac
ccccagcccaagtgcagcggtcgcacacaactctgtcgtgaggtgctaaacgacacgtgg
gtgtctatccccacctggtcagaggattccacgttcgtcacgtcacgcaagtcacagttt
gaggagtacatctacaagtgtgaggacgagcgttttgagctggacgtggtgttggagatg
aactttgccaccatcaagacgctggaggcagtacagcgcaagatgcagcgcatgtccacc
gaggaggccgccaagttcaggctggacaactctctgggggggtcctccgagtttgtagct
aagaaggctatctgcagaatctacggtgagaagtcggcagacattgtcgacggtctgaag
aagaatcctgttgtcgctgttccactggtactcagaagactaaaagcgaaagacgaggag
tggcgtgaagcgcagaagagtttcaacaaggtgtggcgcgagcagaacgagaagtactac
ctcaagtccctcgaccaccagggtatgaccttcaaacagaatgacatcaaggccctccgc
ggcaagtcgctcatcaacgagatcgaaaccattctggaagagcaaaacgagtccaaccag
caaggacagtccatggagatcacggagccacacatcacggagacatatgaagacaagtct
gtgtttgatgacgccgcgtccatcatcatacacaacatgaagcgacaatccaacatgcac
catgaggacaagaagaagatcaagcagctggtgtaccacgttgtcagggacctgctcttc
tacccacggggagatctcagcgacgatgaagatgaagacacagacggcgacagcggtgac
aagaagccgaaagactcgtcatcgtcggacgcggtgcgagggacgtcggtcaaggaagag
aaagacgggtgggcggagagtcggcagaacggacacgacaccgacttgacctcttgcacc
accggtgccgactcctcaccctcggacaagccggcagcgacagggaagctgtctcagcag
accaacggcgactcggtggaacttgatctcgcggatgaggatgatgctgatgaccactac
acgctgttttacggcaacacccagtggtacctgttcttccgcctgcacttcaagctgtgt
cagcgcctgctccatttccgccggatgtccgagaaaatcgcacagcaggaagagaacagc
aaggccgatcgtaaaccctccacggccctggcattacgtctccgcaccacgtttgacgtg
gagccaaaagactactacagctatttcctggattccattaagaacctgatggactgttcc
atcgagtcggggacgtacgaagacactctgcgcgagatgtacggcatcaactcctacctg
ggcttcaccatggacaaacaggtcgtgcagatcgtcaggaatctgcaccacctgattacg
gaagagagcagcacggaaatgacggatcagttcatggaggaaaaacagaaccaagccacg
ggcggcccgctctccatgcgcccgctacgccagcaggcagaactcaactaccagcgccgc
gcagagaacctcatggccgatgacaactgcttcaagtttgtcttttacaagaagagcggc
agtgtgcacgtgacgttgctggaccaaggcggggagcagggagaggaggtgggggagatg
gagcgctgggcagcctacgtcgagcgctacgtttccatggcgcccaccgacccctcgcag
aacttcagccagaagatggtcaagctgctctgcgacaagcccgtctttctcagcaggaac
attgccagctggagacggaggaacatgtgtggtcagcgagaggaggaggaggaagaggaa
gacatggaggaggaggaggagagagggagcgaggaggagaaagaggacaaagaggagaaa
gagaagaaagacgaggacgctcacagtgaggacgccctgtgcttggaccgacccaagaaa
tcgaccaatcagaacatgatgaactttcacctcatggagtgcgtcaaggacgtcaacgac
ggaaagacgatgatagcggacggcgggggagtgaggttcaccatcaactctctcaagatg
cagcacatctgttggggcgctgagatgtggtacagacgcagtgcgctgcaaaccgctcgc
aagactcacagccaggtgtcactagcgaagcaccacaagttctcgcgctggctggacgtg
tttcaccgagacaaggtgacgacggaggatgaccaggactgtgaggactggatgatgggg
agggtggacaacatccagccctgtacctccactttcctcatcgaggtggacaaccccaac
aagcccccctactaccccttccatcgttaccgggtgaagcgtcgcactcctagccccgcc
cccatcaccacctccacccccaccccctccatcgtttcctccacctccccttcctccatc
tcttcccttccccaatccgcccctgccccctctgtccttcctcttccccttgaccttcag
cctggcggccgaccttcatcacgaccttcgtctcgaccttcatcgcgaccttcaaccccg
gcagagtga
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