Littorina saxatilis: 138951683
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Entry
138951683 CDS
T10665
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
lsax Littorina saxatilis
Pathway
lsax03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138951683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lsax03009
]
138951683
Ribosome biogenesis [BR:
lsax03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
138951683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_14
AAA_33
Mg_chelatase
ABC_tran
AAA_2
NPHP3_N
IstB_IS21
RNA_helicase
AAA_17
nSTAND3
AAA_28
AAA_18
ORC-CDC6-like
PhoH
AAA_7
Rad17
AAA_25
TIP49
Motif
Other DBs
NCBI-GeneID:
138951683
NCBI-ProteinID:
XP_070179344
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Position
LG17:10174317..10197247
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AA seq
887 aa
AA seq
DB search
MSNREHKPYISDPKLLPRIKSFLKGKSADSFVHADSVVQHLQATYSDYSRKKKNAFILTV
SKALPVAQLEVFGPEALTAGNKRHRQDSSSDSDPEDLVVYENTNSLNIGMRNLYKNSSGK
NPASQTPDLPKKAKKKKAQQTPAFNNAKQSQSPAASPKWVLDRSGKNGISAKGEKNDSDL
DAESELAHSDVCDSSADSSMQRKGTAQSSVYVCSCGQTTKLAEAQTSVCICACGATVTLE
NVDTDKSSGDRSRTVTNTRSKRTDREMGPRKVLHKRSATASADLDAEDRLNEKFTTKKEK
MKQKKAKLSYVDTDLEPILSSKTFKDFGGNEKLLEDLCDELVTFSYSNCWRHMGGKPQPG
IMLYGPTGSGKGLLAECIAGHVQVPLLKPSVTTLTSGVSGESEQRIRDLFDQAATHAPCV
LFLDNIQTIAPRQDAPGASKDMVNRMITQLCECIDELRKRPEDILLVASTNQIDTIHESL
RIPGRFSEKQLHIPDEKARESILEKLCENLTLAPGLNLKTLAKLTPGFVAGDLHKYVTDA
GAYRLKRLVSHYDGPRSLQEKLSGCCQPPAHLRGNDIEFTEEDQKLLLVTEEDFQAALKK
ADPAAMREGFGIVPDTTWADVGGLKHVQDQLDDSVLLWIKHPELARGYNMPTNSGTILVG
PPGCGKTMIAKAMANEAGLNFILISGPSLLDKYVGESERSLRRVFEKAQMCAPCLIFFDE
MDALCADRNSKEGGTVAKSLTNQLLALMDGCGERNQVYVMGATNNLEKIDSALMRPGRFG
SKIFIGLPNEESRLDILKKVTKDGTLPKLVSCDLNNLAQLTDGFSGADLKELVTLACQLA
IQERKGKDDTCIDHVLTGQHFTEVLKKFNPSVKKREVARYERVAQQL
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacagagaacataagccatatatatcagacccgaagctccttcctcggatcaaa
tcgtttttgaaaggtaaaagtgctgactccttcgttcacgcagacagtgtggtgcaacat
cttcaggccacatacagtgactactcaagaaaaaagaagaacgcatttattcttactgta
tctaaagcattgcctgtagctcagttagaggtgtttggaccagaagctcttacagcagga
aacaaaaggcatcggcaggactcaagttcagactctgatccagaggaccttgttgtttac
gagaacacaaactcgttgaacattggcatgagaaatctctacaagaacagttcaggaaag
aatccagcatcccagacaccagatctaccaaagaaagccaagaagaaaaaagctcaacag
acgcctgccttcaacaacgcaaaacaatcacagagcccagcagcttcccctaaatgggta
ctggaccgcagcggtaaaaatggaatcagtgctaaaggggagaaaaatgacagcgattta
gatgcggaatcagaactagcgcattcagatgtgtgtgacagttcagcagacagtagcatg
cagaggaaaggaacagctcagtccagtgtgtacgtatgtagctgtggacaaacaaccaag
ctggctgaagctcagacctctgtgtgtatatgtgcttgcggtgcgacagtgactctggag
aatgtagacacggacaagtcttccggtgatagaagtagaactgtgaccaacacccgttca
aaacgcactgacagagagatgggtccaaggaaagtgcttcacaaaagatctgcgacagca
tcagcagacttagatgcagaggacagactaaacgagaagttcaccacaaagaaagagaaa
atgaaacaaaagaaggccaaactgtcatatgttgatacagatttggaacccatattatcc
agcaaaacattcaaagactttggaggcaatgaaaaactgttagaggatttatgtgatgaa
ctggttacgttttcttactccaactgttggagacacatgggcggaaaaccacagccagga
atcatgctgtatggtcccacaggctctgggaaggggcttcttgcagagtgcattgctggg
catgtgcaagtgccgctgctgaagccatcagtgacaacactgacctctggcgtttctgga
gaatcggagcaaagaatcagagacctttttgaccaggcagctacccatgccccgtgtgtc
ctgttcctggacaacatccagaccatcgcccccagacaggacgctcctggggcctccaaa
gacatggtcaacagaatgatcacacagctctgtgaatgcattgatgaattgcgaaaaaga
ccagaagacatcttgctggtggcatcaaccaatcagattgacaccatccatgagagcctg
agaattcccggtcgattctcagaaaagcagcttcatattccagacgaaaaggcgagggag
tccatcctagaaaagctgtgtgaaaaccttactctggctccaggactgaatttgaaaact
ttggccaagttgacgcctggatttgtggcaggggacctacacaagtatgtcaccgatgct
ggggcatacaggctaaaaagacttgtcagccactatgacggtccaaggagcttgcaagag
aaactgtccggttgttgtcaacctcctgcccatttgagaggaaatgacattgaattcaca
gaggaagaccaaaagctgctgctggtaacagaagaggactttcaggcagcactgaagaaa
gctgaccctgctgcaatgagagaaggatttggaatagtgcctgacacaacgtgggctgac
gttggaggcctgaaacacgtacaggaccagctagacgacagtgtgctgctatggatcaag
caccccgagttagccaggggatacaacatgccaaccaactctggaacaattttagttgga
ccacctggttgtggaaaaaccatgatcgctaaggccatggccaatgaagctggactcaac
ttcatcctcatcagtggaccctctctgctggacaagtatgtgggtgagagtgagagatcg
ctgaggagagtgtttgaaaaggctcagatgtgtgctccctgcctgatcttctttgatgaa
atggacgccttgtgtgcggacagaaacagcaaggagggggggaccgtggccaaatctctg
accaatcagcttctggcgctgatggatgggtgtggagagcggaaccaggtgtacgtcatg
ggggctaccaacaacttagagaaaatcgactctgctctgatgagacctgggagatttggt
tcaaagattttcattggactaccaaatgaagaaagccgcctcgacattttgaagaaagtg
acaaaggatggaacattgccgaagttggtgtcttgtgatctgaacaatttggctcaactg
actgatgggttctcgggtgctgacctgaaggagctggttacccttgcctgtcagctggcc
atccaggagaggaagggaaaagatgatacatgtattgatcatgtactgacaggccaacac
ttcacagaggttttgaaaaagttcaacccttcagtcaagaaaagggaggtggcaaggtat
gaacgtgtggcccagcagttgtga
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