Littorina saxatilis: 138951806
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Entry
138951806 CDS
T10665
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
lsax Littorina saxatilis
Brite
Chromosome and associated proteins [BR:
lsax03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
138951806
microRNA pathway
RISC loading complex
138951806
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
138951806
NCBI-ProteinID:
XP_070179458
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Position
LG17:37259959..37288138
Genome browser
AA seq
2565 aa
AA seq
DB search
MVRVGGDSSRKGARHFRYDDIPTDTFTPRTYQVELLESALQGNTIACLGSESSKVFLGLM
VIQEKSHQIRTPLEEGGKRSIFLTNSEEDVETVWSTLFHHTFLTIGRAPPEALDQWSAEQ
WMSTFSSNNVLALSAPVFLGCLDKGYLPLTAVNLLVMNDCHKAVGDHAYVSVMSHVTKCG
DAAPHLLCLTAAILGSECSDPQELASRIESLESTFHSKAETSMLVISERFGCRPKESIIE
CEIDGDVTGMGDQLATILYSAWYFLEDSQVKLDDQASKTDPLHVPKFAISECINILQTLG
SWCAASIAENLISQLEKVVKHESNQMLKLFIRYTITQLRLVVRTFEVGFTPDYAIEELLK
YTTSKVRELVSIFRKYKPEMDFMIITREGDEGDAMSDLSDDEGNDDDSLDLSGSDGEDEK
DKSSKHIHIAVKRVEKEESDSPFEDERKLSGLVFVDNRYVAFALNKMIEEVCSWDENLCF
VKSSHITGQGIHRSDGRKDLSNASRKQEEILRRFRMQERNLLISTSVLEEGVDIPKCNLV
VRFDPPKDYKSYTLSKGRARARDAEYVILVEEELMEDFSDEIHVFKGIEQVLIGAGRGRR
DLEDAQEVQQLSQPEYTPLPTFCPLNQPGAASVSMKNSIALVNRYCAKLPSDAFTHLTPQ
CRVCQSPADPAQYVAYLRLPVNSPIKEELKGPAMPSRQLAKMAVALQMCELLFKAGELDC
HLQPVGKEMFVCEEEEEWEDEEDEGGSQARPGTTKRKQYYIKKPADAFVKSHPKPDKQCF
LYHVTMTLTGPITEDQNTRGRKIYAPQESTQSFGVLLSSEIPHVPSFPVYTRSGEVTTSL
ELLREVCYTNKELEKLVDFHHFVFSSVLHLEKDPMMFSPEAANIGFLIVPLNCSPDSGKL
EIEWSFVEEVNQNTVVHRRNVFDGNRNIFEFVQQHFQDAVVMPSYRNIDQPQHFYVAEIR
TDLSPLSPFPSPELYKTFAAYYTTKYGLTLTNTDQPLLDVDHTSARLNLLTPRYMNQKGR
ALPTSSLETKRARRENLQQKQILVPELCDIHVFSASLWRKAVCLPAIMYRMNYLLLAEEL
RKLIAAETGIGKVSLTEGFRFPRLDFGFETNPEKLQIVGQKAAERDQQTEDSEKASNASK
QQKESCTPRTESAIHDSSPDEDKTDTGASSDSDSGVVLSESDTGCASQPRGTAPHSLQPE
KRLLTAIDTVDSQGSNPPAKQKDNVLEHVGRDTTGKTTSTLENLLPESATGKNLLSGIKE
HNAKSCDISDPFYTPTTSRPSSPAGSDSSESVYEDAEDSPETTTVKSSKKDTDYDTDALC
QSHKLSPQNYLSSSSSQSATSSTSSLPSKSEILLPSSAVPSRSSTILTSSSSKSSSVCPP
VSDAPVISTSSDDILTSSLTHSPVLAGTKEETVSESKMNLPQSLHDVADTTLCSQSQKVP
DRQTSPYLSNNHRSNTERHTSASALKHGEESRPCIRSTKPDLNKQGHISQKSQPTENQPE
SLHSHPLTQQNLPNLNHKEPTVCDEHIKTGASQNKDDHQPGKAIESEFDEFLDVTGSNHR
EKSEKSHTVTFPVDPEISHFTKPSDEVKLSFESLNNVRNGLDANWARPSMAASSGKEWAP
DEDLTTFEVDSNLPDMTGENKENGFSENPKPESKLNDLTTFEVNSNLSGLDELPDENNTD
AFSENPQSESKLHPELSPNKSNSAEVKCDVSDQLDRKASSTVSLKESEEKNGAVLTSENK
QSPSHCHVNNVNTVSDLPQKDNAVLPSRADGDPVETVKSLDHSPSTEADDKTAENDKKSA
AETEALGWGTEEELDPSEWMNPLLNSTPLKTQNQTQSVPKQDPHDFSTASSSLSCTEPST
ENGPVGVKNDMIETKSNCSKTNAVSSAEVFNGKDSVSESKENCTGAHNQAKNKNQTFGDA
PKEKESEESPILNQTENSVSNLNQETTVTKNKPPKTLNHTTTTTVNPNQFDIGTWNTGKK
PKKDVKDGTQKDAETVESRPLMISLDHDTDLETFMGPSPCLLLQALTMSNANDFFSLERL
ETIGDSFLKYAITVYLYCCYPGTHEGKLSYLRSKQVSNYNLYRLGRRKGLAERMVSTKFE
PYENWLPPGYIISEDRRRGPVPKVVIATCNPKLSAAAPNNFVIEEEGSESEEDQKKETDA
FHAMVEEMDRQQAVDQQIDISSSHKHAMVPYCLQLHHGIPDKSVADCVEALIGCYLTTCG
KQAALTFMSWVGLKVLPRKRVVKHRKGEEVKVTEFQELQCPPSPLLRSVPEAEDLLNQLL
EGFSEFEVRIDYKFRDRSYLLQAFTHASYHYNYITDCYQRLEFLGDAILDYVITRHLYED
SQRYSPGILTDLRSALVNNNIFAALAVKWDFHKFFKAISPSLFIVIDKFVVRQKEREDQI
DEIEELAVPEEEEEDDTEDGDPATAAAAAVTEGPVGEIDERNEEVELEIPKSLGDIFESV
AGAIYLDSGMSLDTVWRVYYRMMKPHIDKYLKDIPKSPVRELLEMEPETAKFEKPERTLD
GKIRVMVNVVGKGVFYGVGRNYRIAKSAAAKKALRFIRNLQEGLA
NT seq
7698 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggttggaggtgattcgtccaggaagggcgcaagacatttccggtacgatgac
attcctacagacacctttactcctcgtacttaccaggtggagttgctggaatcagctctt
cagggcaacaccattgcttgcctgggaagcgaatcaagcaaagtcttcctggggctcatg
gtcattcaggaaaaatcccaccagattcgaaccccgctggaagagggtgggaaaagaagc
attttcctaacaaactcagaagaggatgtggagacagtatggagcaccttgttccaccac
acattcctgaccataggtagagcaccacctgaggcacttgaccagtggtcagcagagcaa
tggatgtccaccttttcttccaacaacgtcctggccctctccgcccctgttttccttggt
tgcctggacaagggttaccttcccctgaccgctgtcaatctcctggtgatgaacgactgc
cacaaggctgtcggcgaccatgcttacgtcagtgtcatgtcacacgtcacaaagtgcgga
gacgcagcgccacatctgttgtgtctgacggcagccattcttggaagcgaatgcagcgac
cctcaagaacttgcatccagaattgaatctctagaatcaaccttccactccaaggcggag
acatccatgctggtgatatcggaacggttcggctgtaggcccaaggagagcattattgag
tgtgagattgacggtgacgtgactggtatgggggatcagctggcgactattctctactct
gcctggtacttcctggaagacagtcaggtcaagctggatgaccaagcctcaaagacagac
cccctccacgttcccaagttcgcaatctcagagtgcatcaacatcctgcagactctgggt
tcgtggtgtgctgcatctattgcagaaaatctcatcagtcagctggagaaagttgtcaag
cacgaatccaaccagatgttgaagctcttcatccgttacactatcacccagctcagacta
gtcgttagaacttttgaagtcggtttcacccctgattatgctatcgaggagctcttaaag
tacaccacgtccaaggtcagagagttagtcagcattttcagaaaatacaagcctgaaatg
gacttcatgatcatcactagagaaggagatgaaggtgatgcgatgtcagacttgtctgat
gatgagggcaatgacgacgactcactggatctctccggttcagacggcgaagatgaaaaa
gacaaaagctcaaaacacattcacattgccgtgaaacgggtggaaaaggaggaatcagac
agcccttttgaagacgaaaggaagctgtcagggctggtgtttgtggacaatcgttacgtc
gccttcgccctgaacaagatgatagaagaagtgtgctcgtgggatgagaacttgtgcttt
gtaaagagcagccacatcacgggacagggaatccacagatcggacggacgcaaagatctg
agcaacgccagccggaagcaggaagagattctgagaaggttccgcatgcaggagcgcaat
ctgttgatctccaccagtgtgctggaggaaggggtggatatacccaagtgcaacttagtc
gtccgttttgatccacccaaagactacaaatcctacactttgtctaagggccgggcccgt
gcaagagatgcagaatatgtgattcttgtggaagaggagttaatggaagacttctccgat
gaaattcatgtgttcaagggaatcgaacaggtgctgatcggggcaggtcgggggagacgt
gatttagaagacgcgcaagaagtccagcagctaagccaaccagaatacacccctctacct
acattttgtcctttgaaccagcctggggccgcttctgtgtccatgaaaaattccattgcc
cttgtcaacaggtattgtgccaagttgccaagcgatgcgttcacccacctcaccccacag
tgccgtgtgtgtcaatcacctgctgatcctgcccagtacgttgcctacctccgcctgcct
gtcaactctccaataaaggaagagctaaagggcccagcgatgcctagtcgtcaacttgct
aagatggcagtagccttgcaaatgtgtgagctgttgttcaaagcaggtgagctggattgt
cacctgcagccagtgggcaaggagatgtttgtgtgcgaggaggaggaggagtgggaggat
gaagaggatgaggggggcagccaggcgcgaccagggaccaccaaacgcaagcagtactac
atcaaaaagcctgcagatgcctttgtaaaaagtcatccgaagccagacaaacagtgcttc
ctgtatcatgtgaccatgactctgacaggaccaatcacagaggaccagaatactcgtgga
cgtaaaatctacgctcctcaggaatcaacacagtcttttggagtgttgctgtcatcagaa
ataccacatgtgccaagcttccctgtctacacacggtcaggggaggtgacgacgtcgtta
gagttgctcagggaggtttgctacactaacaaagagctggagaagcttgtggacttccac
cactttgtgttctcctcggtgctgcatctggaaaaagatcccatgatgttctcgcctgag
gctgccaacatcggctttctcattgttcctctaaactgtagcccagattctggcaagctg
gagatagagtggagctttgtggaggaagtcaaccaaaacacggtggtccacaggcgcaat
gtttttgacggcaaccgcaacatcttcgagttcgttcagcaacactttcaggatgcggtg
gtcatgccgtcctaccgcaacattgaccagccgcagcacttctacgtggccgaaattcgc
actgacctgagtcctctcagccccttcccctcccctgagctgtacaagacgttcgcagcg
tactacacaacaaagtacgggctgacgctcaccaacacggaccagcctttgttggacgtc
gaccacacctccgctcgactgaaccttctgacgccgcgttacatgaaccagaagggaaga
gcgcttcctactagcagtctggagaccaagcgagcgcgccgcgagaatctgcagcagaag
cagatcttggtgccagaattgtgcgacattcatgtcttctcagcgtccttgtggagaaaa
gctgtgtgtctgcctgcgattatgtaccgcatgaactacctcctcctggccgaagagctg
cgaaagctcatcgctgcggagactggaatcgggaaagtgagtctcactgagggtttcagg
ttcccccgtttggactttggctttgagaccaacccagaaaagctgcagatagtaggtcag
aaagcagcagagagagaccagcaaacggaagattctgaaaaagcttcaaatgcctccaag
cagcagaaagagtcttgtacaccaagaacagagtcagcaatccacgacagcagtcccgat
gaggataagaccgacacaggagcatcatctgactccgattcaggcgttgtgctgagtgag
tcggatacaggttgcgcttctcagccaagaggcactgccccacattctctacagcctgaa
aaacggttactcactgccatagatacagtggattctcaaggttcaaatccacctgcaaaa
cagaaggacaatgtgctggagcatgtgggtcgagacacaacaggaaagactacttcaact
ctggaaaatctacttccagaaagtgcaactggaaagaatctcttatcaggaatcaaagag
cataatgccaaaagttgtgatatttctgatccattttacaccccgactacctccagacca
tcttccccagcgggatctgattctagtgagagtgtttacgaggacgccgaagattccccg
gagaccaccaccgttaagtcctccaaaaaggacactgactatgatactgacgcactttgc
caatcgcacaaactatcaccacagaattatctgtcgtcatcgtcttcccagtctgcgaca
tcatcaacctcatcactgccatctaagtcagagattttgcttccatcatctgcagtacca
tcaaggtcatcaacaatcttgacgtcgtcttcatctaaatcatcatcagtgtgtcctccg
gtgtcagatgcacctgtaatcagtacttcatctgatgatatcttaacgagttctttaaca
cattcaccggtgctagcaggaacgaaggaggagacggtatcagaatccaaaatgaacttg
ccacagtcattgcacgacgttgcagacaccaccctttgctcacagtcacagaaagtgcct
gaccgccagacctctccgtacttatccaacaaccaccgctccaatactgaacgccatacc
tcagcatctgcgctgaaacacggagaggagtcacgtccgtgtattcgttccaccaaacct
gatctcaacaaacaaggccacatttcacagaaatctcaacccacggagaaccagcctgaa
agccttcattctcacccgctcactcaacaaaacctgccaaacctgaaccacaaagagcca
acagtttgtgatgagcatatcaaaaccggggctagtcagaacaaggacgaccaccaacct
ggaaaagcgattgaaagtgaattcgatgaatttcttgacgttactggatcaaaccacaga
gagaagtcagagaaaagccacactgtcacattccctgtagatccggagatctcccatttc
acaaaaccgtctgatgaagtgaagctgtcatttgagtcgctgaacaacgtgagaaacggt
ctggatgctaactgggcccgcccttccatggcagcatcgtctggcaaggaatgggcaccc
gatgaagatctgaccacttttgaggtcgacagcaacttgcccgacatgactggtgaaaat
aaagagaatgggttcagtgaaaacccaaaaccagaatcaaaacttaacgatctgaccacg
tttgaagtgaacagcaacttgtccggtttggatgaattacctgatgaaaacaatacggat
gcgttcagtgaaaatccacaatcagaatcaaaacttcatcctgaactgtctccaaacaaa
tcaaacagtgcagaagtcaaatgtgatgtttcagaccagttagataggaaggcaagctca
acagtgtcactgaaagaatctgaagaaaagaatggtgctgtgctcacttctgagaacaaa
cagtctccttcccactgccacgtgaacaatgtaaatactgtatcagacctccctcagaaa
gacaatgctgtcttgccttcccgtgctgacggtgatccagtagagacagtgaaatccctt
gaccactctccttcaacagaggctgatgacaaaacggccgaaaatgacaagaaatctgca
gctgaaactgaagcacttggatggggcaccgaagaagaactagatccaagcgagtggatg
aatcccttgctcaacagcacacctctcaaaactcaaaaccaaacccagagcgttcctaag
caagacccacatgatttctctactgctagttcatctctgtcttgcactgaaccatcaaca
gaaaacggacctgtgggtgtcaaaaatgatatgattgaaacaaaatctaactgttctaaa
acaaatgcagtttcttcagctgaagtgtttaatgggaaagacagtgtaagtgaatcaaaa
gaaaattgtacaggtgcccacaatcaggctaagaataagaaccaaacctttggagacgca
ccaaaagagaaagaaagtgaagaaagtccaatcttgaaccaaacagaaaactctgtctca
aacctgaaccaagaaaccactgtaaccaagaacaaaccacccaagaccctcaaccacacc
accaccaccacggtaaacccaaaccagtttgatattggcacctggaacacgggcaagaaa
ccaaaaaaagatgttaaagacggaacacagaaggacgcagaaactgtggaaagtcgtccg
ctcatgataagtctggatcacgacacagacctggaaacattcatgggtccgagcccatgt
ttgctgcttcaagctctcaccatgtctaatgccaatgatttcttcagcttagagcgtctg
gagaccatcggtgactccttcctaaagtatgccatcaccgtctacctgtactgttgctac
cctggcacgcatgagggcaagctcagctacctccgcagcaaacaggtcagcaactacaac
ctgtaccgacttggccggaggaaaggattggccgaacgcatggtgtccaccaaatttgag
ccctacgagaactggctgccgcctggctacattatcagtgaggatcgacgcagaggacct
gttccaaaggttgtcatagcaacctgcaaccccaagctgtctgctgcagcgcctaacaac
tttgtcatcgaggaagagggatcagaatcagaggaagatcagaaaaaagagacagacgcg
tttcacgcaatggtggaggagatggatcgccaacaagccgtagatcaacagatcgacatc
agcagcagtcataagcacgccatggttccctactgcctgcaattgcaccatggaattccg
gacaagagcgttgccgattgtgtcgaggctctgattggctgttacctcacgacgtgcggc
aagcaggctgcattgaccttcatgtcgtgggtggggctgaaggtgttgcctaggaaacga
gtggtgaaacatcgtaaaggagaggaggtgaaggtgacagaattccaagaactccagtgc
ccgccttctcctctgttgcggagtgtgccggaagcggaagaccttctcaatcaacttctg
gaaggtttctcagagtttgaggtccgcattgactacaagttccgcgatcgctcgtacctt
ctgcaggccttcacccacgcttcctaccactacaactacatcacggactgctaccagagg
ttggagttcctcggcgacgctatcctggactacgtcatcaccagacacctgtacgaagac
tctcagcgctactcgccgggaatcctgaccgatcttcgctctgccttagtcaacaacaac
atcttcgcagcgctagcggtcaagtgggacttccacaagttcttcaaggccatctccccg
tccctgttcatcgtcatcgacaaattcgtcgtgcgacagaaggagcgggaggaccagata
gatgaaattgaggagcttgccgtgccggaggaggaggaagaagacgacacagaagacggg
gatccagcaacagcagctgcagctgcagtgacagaggggcctgtgggagaaatagatgaa
aggaacgaggaagtggaactggagattccaaaatcgctgggcgacatctttgagtctgtg
gccggcgccatctacctggacagcggcatgtcgctggataccgtgtggcgtgtgtactac
cgcatgatgaagcctcatatcgacaagtacctgaaggacattcccaagtcacctgtacga
gagcttctggagatggaacccgagacagccaagtttgagaaaccggagcggacactggac
ggcaagatacgagtgatggtcaacgtggtgggcaagggtgtgttctacggtgtgggccgc
aactaccgcatcgcaaagagtgctgccgccaagaaggctctgcgtttcatccgcaatctt
caagaaggcctggcatga
DBGET
integrated database retrieval system