Littorina saxatilis: 138951891
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Entry
138951891 CDS
T10665
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1-like
KO
K11274
chromosome transmission fidelity protein 4
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lsax03036
]
138951891
Chromosome and associated proteins [BR:
lsax03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
138951891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Beta-prop_WDR5
Ctf4_C
Beta-prop_THOC3
WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
HMG_WDHD1
ANAPC4_WD40
WDR55
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_WDR3_2nd
HMG_box
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_Aladin
NBCH_WD40
Beta-prop_EML
DUF6476
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_ACSF4
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
138951891
NCBI-ProteinID:
XP_070179552
LinkDB
All DBs
Position
LG17:complement(4239188..4305004)
Genome browser
AA seq
1079 aa
AA seq
DB search
MKPMRYAHNDGHTDLCYDDSGRYILTCGTDGDVRIWDGIDDDDAVSHRVGDRAFAIAFKN
ERFFTATDANSVQACKFPDGMPDGLVTRFTAPINHMVFNAAGSVMVAGSSDFTVKVVEVE
NSRHKVYRGHKAPVLSIALDPKEQLVASSSCDGTVQVWSVDDQAEVKTLPLLDKCSDVSL
AKSLCRMCWSPNGEFVFVPVGKGIHMFARENWELVDKIVHDDIPGTINVLSLSPDGHHIA
AGCIDGVIAVVDWQKRKVVKKHRHERGLTITSLAWNPSNKHHVAFCDGEGQLGLLEVLQA
SSQGDSGEPASGMEGVFDDDDDMLIQASSKVMGEIDDDDTDSIDLGAIKKSMMPLIMGDD
DSNASGSVTGATGEETEGAAPPRPVAPIVVEGFKPTPLQKAFQSGSTPLHLSSRFMKWNS
IGIIRQYNTDDESSIDIEFHDTATHHAMHITNTSDFTMADLSAHAVVLATASDEECNSKL
TCMHFGSWDSAKEWSVIMPEGETVQAVTAGEGWIAAATSSRMVRIFTVAGVQRSTFTLPG
PVVCLTAHRQHLMAVYHAGMGLPGDQNLACRMLNVKGQKRASEETRLPLSPKSILSWAGF
SAEGTPFTMDSEGVVRMLNTCLANTWTQVANTCDQVKGKSDHYWIVGVNENPQQLRCIPC
KGSRYPATLPRPAVTVLPFCVSLCEPDSEKSQYEEQYMRSVVFAQHLSRLAAEGVELDEA
TQRNMQRPAQEALMKLFALSVRSEREFRAMEVCELMPDEQTLQLSIKYATRQRHLHLAQR
ISQLAQQRAQEEQQEEEEEEEEDFRDYLQASHNSTETEWAAESGQGTRKKAVRQEEEEEM
EEGEEEERKPSGPMLNMKAKEKLVKQPSFGRANPFKVASQEKEVGSTKGTQVFDVMKKTK
ERAPVISPLPITLKQTKGGQRKITVKGKQAQQPKLAFGSGSDMTPSSKDTVADTQDEEQS
ENEPVKKPVSAFELWLSESQGDLEEEHPDLGEEELSRAAAEKFRALPREERQVWLQKAKS
QPQADDGASDKKRKHSEEKDDEVPPKTQKKAPASPPKKPLSQNTNSKSKLAAFAFSTKP
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccatgcgttatgcacataacgacggacacacggatttgtgttacgacgactca
ggaaggtacattctgacatgtggtacggatggtgatgtcagaatatgggatggaattgat
gatgatgatgctgtgtcgcacagagttggcgacagggcatttgcaattgcattcaaaaat
gaaaggtttttcacagcaacagacgccaattccgtgcaagcttgcaaatttcctgatggt
atgccggatgggctggtgacacgtttcactgctcccatcaatcacatggtcttcaacgct
gctggctctgtcatggttgcaggctcaagtgacttcacggtgaaggtggtggaggtggag
aacagccgtcataaggtgtatcgtggtcacaaggcccctgtcctcagcattgcactcgac
cccaaggaacagctggtggcctcgtcaagctgtgacggcactgtccaggtgtggtcagtg
gacgaccaggcagaggtcaagacactgccccttctggacaagtgtagtgatgtcagcctt
gccaaaagcttgtgccgtatgtgttggtcaccgaatggagagtttgtttttgtgcccgtc
ggcaaggggattcatatgtttgcacgtgaaaactgggagttggtggacaaaattgtccat
gatgatatacctgggacgatcaacgttctgagcctgagtccggacggtcatcacatagcc
gcaggttgtattgatggagtcatcgctgttgtggactggcagaaacggaaagttgttaaa
aaacacagacacgagaggggtctgacaatcacgtcattggcctggaatccctccaacaag
catcatgtggctttctgcgacggagagggccagcttgggttgctggaggtgcttcaggcg
tcatctcagggggactccggtgagccagcgagcgggatggagggcgtgtttgacgatgac
gacgacatgctgatccaggccagcagtaaggtgatgggggagatcgacgacgacgacacg
gacagcatcgacctgggcgccatcaagaaaagcatgatgcctctcatcatgggcgatgac
gatagcaatgcttcaggttcagtgacgggggcaacaggagaggaaacggagggggctgcc
ccgcctcgccccgtggcccccattgtggtggaggggttcaaacccacacccctacagaaa
gccttccagtctggatccaccccattacatctcagcagcaggttcatgaaatggaacagt
atcggcatcatccgtcagtacaacaccgacgatgagagctccatcgacatagagttccat
gacacggccactcaccacgccatgcacatcaccaacaccagcgacttcaccatggccgac
ctgtcagcacatgctgtcgtcctagccactgccagtgacgaggaatgcaacagtaaactg
acatgcatgcactttggatcatgggacagtgcgaaagaatggagtgttatcatgcctgaa
ggagagacggtacaggccgtgacagctggagagggttggatagcagcagctacgtcatca
cgcatggtgaggattttcaccgtggctggcgtccagaggtctaccttcaccttgccggga
ccagtggtgtgtttgaccgctcacaggcaacacctgatggccgtttatcacgctggcatg
ggtctgccaggggatcagaatctggcgtgcaggatgctgaacgtaaaaggacaaaaacga
gccagcgaggagacgcgcctgcctctgtcgcctaaatctatccttagctgggctgggttc
tctgcagaagggacaccattcaccatggacagtgagggagtggtcaggatgctcaacacc
tgtctggctaacacctggacacaggtggcaaacacatgcgaccaggtcaaaggaaaatcg
gaccactactggattgtgggggtcaacgagaaccctcaacagctcagatgtattccgtgc
aaagggtcgcgttatcctgccactttgccgcgcccagccgtcactgtgctgccgttctgc
gtgtctctgtgtgagccagactcggagaaatctcagtatgaagagcagtacatgcgtagt
gtggtgtttgcacaacacctgtctcgcctggccgctgaaggtgtcgagttggacgaagcc
acgcagagaaacatgcagagacctgctcaggaggcgctcatgaaactttttgctttgtca
gtgcggtcggagcgagagttccgtgccatggaggtgtgtgagttgatgccggacgaacag
acactgcagctgtcaataaagtacgccacacgccagcgccacctacacctggcgcagcgc
atcagtcaactggcgcagcagcgtgcacaggaggagcagcaagaggaggaggaggaggaa
gaagaggatttcagagattacctgcaggccagccacaacagcacagagacagagtgggca
gcagagtcaggccaaggcaccaggaaaaaggcggtcaggcaagaggaggaggaagagatg
gaggaaggggaggaggaggagagaaaaccttcaggccccatgctgaacatgaaggccaag
gaaaagctggtcaagcagccgtcctttggaagagccaaccctttcaaggttgcgtcacag
gagaaagaggtgggcagcacgaaaggcacgcaggtgtttgacgtcatgaagaaaaccaaa
gagcgtgctccagttatctcccctctgcccatcaccctcaaacagaccaaaggagggcag
cgcaaaatcactgtcaagggcaagcaagctcagcagcccaaactggcctttggttcaggg
tcagacatgaccccctcatctaaagacacagtggcagacacacaggacgaagaacagtct
gaaaatgaaccagtaaagaaaccagtcagcgcctttgaattgtggctgtcggagagtcaa
ggtgaccttgaggaggagcaccctgaccttggtgaagaggaacttagccgagcggcagct
gaaaagttccgtgccttgcccagagaagagagacaggtatggcttcagaaagccaagtct
cagccccaagcagatgacggtgcatctgacaagaaacggaaacactcagaggaaaaggat
gatgaggttccacccaagacacagaagaaagcgccagcctcacccccaaagaagccatta
tcacaaaatacaaactccaagtccaagcttgctgcatttgcgttctctacaaaaccctga
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