Littorina saxatilis: 138952058
Help
Entry
138952058 CDS
T10665
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
lsax Littorina saxatilis
Pathway
lsax04140
Autophagy - animal
lsax04148
Efferocytosis
Brite
Membrane trafficking [BR:
lsax04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
138952058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138952058
NCBI-ProteinID:
XP_070179731
LinkDB
All DBs
Position
LG17:62653113..62774679
Genome browser
AA seq
871 aa
AA seq
DB search
MHDAFEADPILDKLPLGIESVACYENILLVGTKQGHLLQYKITRNPPSEPKKYHTDLERS
NKSFSKKPITQIVAVPELFILISLSDNVISVHDLVTFNSITTVHKTKGATLFAVDCRPET
TQTGSTHYLRVGVASKRKIQLFFWKNRDFHELLSDLSLYDYPHALSWSKDSLCVGFKRDY
YIINSTTGSLKELFPVGVQQAEPLVARLRDQRLLLQRDKMSIFINAEGEPTQREPINWSD
IPIAIEHYPPYLVAVLPKFVEVRTIDPKLMIQNLQLPKARLICQGSGVIYVASQSNLWRL
QSVPASQQIRDLLQNKQFELALKLAEQADEPPHEREKRVRNINNLYAFQLFCQHRFEESL
QLFAKLGTDPSHVIGLYPNLLPQDYRSKLEYPERVPELEGHEMEKAVLALIEYLTQKRNE
VMKNDEVVTTAIVEGNTTIKSKKQLSQIIDTTLLKCYLQTNDALVAPLLRLKDNNCHVEE
SERVLKKKEKFSELIILYEKKGLHQKALSLLMKQAVRPDSPLKGHERTVQYLQHLGAEHL
DLIFEYAEWVLQRHPEDGLKIFTEDTPEIETLPRDKVLDYLEKINPSLAIPYLEHVIEDC
EDETAEFHNRLVLLLKDRVQEHMESYLNSLPEGHTPSRTGEEVEDLGKERAKLIHFLRTS
THYQAERLLTRFPLDGFHEERAILLGRLGRHEQALAIYIYLLNSSHLAEGYCENNYDPDR
EESKDVYLYLLKMYLQPPDMSLLGLAPGEAPSIRHNTESALRLLEKHAHQVDVPKALELL
PSSIRVRDILTFLENVLEHNATERRHNQVLRSLSYAENLAVTEQRIQYQRIRVDVTEDTF
CPTCKKRIGESAFYYTPEGSIYHYSCYKGTK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgcttttgaagctgatcccattttggataagctaccgctgggcattgagtcg
gttgcctgttatgaaaacattttactggtgggaaccaaacaaggacatcttctgcagtac
aagatcaccaggaatcccccctctgaacccaaaaagtaccatacagatttggaaagatct
aacaagtcgttttccaaaaaacctataacacagattgttgctgttccagagctcttcatc
ctcatcagtttgtcagacaacgtgatcagtgtccacgacctagtcaccttcaactctatc
accacagtccacaaaaccaaaggggcaacgctctttgctgtcgactgcagacctgagact
acccagacaggaagtacacactaccttagagtcggagtagcttccaaacgaaaaatacag
ctatttttctggaagaacagagatttccatgaacttctgagcgacctcagtctttatgac
taccctcatgccttatcatggagcaaggattcactgtgtgttggcttcaagagagattac
tacatcatcaattcaaccacaggcagcctcaaagagttgttcccagtgggggtccagcag
gcagaacccctggtggccaggctgagagaccaacgcctgttgctgcagcgagacaaaatg
tccatcttcatcaatgctgaaggggagcccacccagcgagaacctatcaactggtctgac
atccccattgccatagaacactatccgccctaccttgtggctgtgcttccaaagtttgtt
gaggttcgaaccattgaccccaaactgatgatacagaacctacagcttccaaaagcacgc
ttgatctgccagggcagtggcgtgatctacgtggcgtctcagagcaacctgtggcgactg
cagtccgtcccagcctcacaacagatacgggacctgcttcagaacaaacagtttgaattg
gcgctgaaactagcggaacaagctgacgagccccctcatgaaagggagaaacgcgtgcgg
aacatcaacaacctgtacgctttccaactgttctgtcagcatcgctttgaggagtccctg
cagctctttgcaaaactgggcacagacccatcccacgtgattggcctgtaccccaacctc
ctaccccaagactaccggagcaagctggagtacccggagcgtgtgccagagctggaggga
cacgagatggagaaagcggtgctggcgctcatcgagtacctcactcagaaacgcaatgag
gtgatgaagaatgacgaggtggtcaccacagccatcgtggagggcaacacaaccatcaag
tccaagaaacagctcagtcagattatcgacaccacgctgctcaagtgttacttacagacc
aatgatgcgctggttgcacctttgttacgtctgaaggacaacaactgtcatgtggaggag
agtgagagagtgctgaagaagaaagaaaagttcagtgaactcatcatactctatgagaaa
aaaggcttgcatcagaaagctctcagtctcctgatgaagcaagctgtccgccctgactcg
cccctcaaaggtcatgagagaactgtgcaatatctgcaacacctgggagcagaacatctg
gatctgatctttgagtatgcagagtgggtgttacagcgtcaccctgaggatggcttgaag
atctttacagaggacacaccagagatagagacgcttcctcgagacaaagtgttggactac
ctggagaagatcaaccccagtctcgccattccttacctggaacatgtgatagaggactgc
gaggacgagacagccgaatttcacaatcgcctggtgctgctattgaaggatcgcgtgcag
gaacacatggagtcatacctcaactccctgcctgaaggtcacacacctagcagaacgggg
gaagaggtggaggacttggggaaagagagggccaagctgattcactttctccgcacgtca
acgcactaccaggccgagcgccttttgacccggttcccactggatggtttccacgaggag
agagctatcctgcttggtcgacttggacgtcatgaacaggcactggcaatatatatctac
ctgcttaacagcagtcacctggccgaagggtattgcgagaacaactacgacccagaccgg
gaagaaagtaaagatgtgtacttgtacctgctgaagatgtacctgcaacctcctgacatg
tctttgctgggtctggcaccgggggaagcccccagcatacgacacaacacagagtctgcc
ctcaggctgctggagaaacatgcacaccaggtggatgtacccaaggctctggagctgctg
ccgagttctatccgagtgcgcgacatcctgaccttcctggagaatgtccttgaacacaac
gccactgaacgcagacacaaccaggtcctcaggagcctcagctacgctgaaaatctagct
gtaacagaacagcgaatccagtaccagaggatacgtgttgatgtcaccgaagacaccttt
tgccccacctgcaagaaacgcattggtgaaagtgctttctactacactccggagggatcc
atctaccattactcctgctacaaagggaccaagtga
DBGET
integrated database retrieval system