Littorina saxatilis: 138952290
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Entry
138952290 CDS
T10665
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD-like
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
lsax Littorina saxatilis
Pathway
lsax03022
Basal transcription factors
lsax03420
Nucleotide excision repair
Brite
Enzymes [BR:
lsax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
138952290
Transcription machinery [BR:
lsax03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
138952290
Chromosome and associated proteins [BR:
lsax03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
138952290
DNA repair and recombination proteins [BR:
lsax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
138952290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138952290
NCBI-ProteinID:
XP_070180024
LinkDB
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Position
LG17:complement(67533747..67594169)
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AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDFIYPEQYLYMLELKRTLDAKGHCVLEMPSGTGKTVSLLSLIIAYM
QAFPLEVNKLIYCSRTVPELEKVVEEMRNLIEYYEKETGEQPDFIGVALSSRKNMCIHPD
VSQDRDGKSVDAKCHKLTASFVRAEHKKDPMVPVCDFFEEFDGHGREVPMPPGVWSLDDL
KEYGKEKGYCPYFLARHALQSAHAIVYSYYYLLDPKVAEQVSKDLSKKAVVVFDEAHNID
NVCIESMSVKLTRKTIDRCSQNIDDLTSKVKRMKNVDEERIQKEYERMVQGLKDAQVARE
TDVVLANPVLPDEILQEAVPGNIRNADHFLSFMKRFVEYLKTRLRIQHVVSETPPSFLRD
CSQKVCIERKPLRFCAERLHSLMRTLELTDLKDYSALSVVANFATLVSTYTKGFMLIMEP
FDDRTPTISNPVLHLSCLDASIAVKPIFSRFQTLVVTSGTLSPLEMYPKILDFHPVTMAT
FTMTLARPCICPMVVSKGNDQVAMTSKFETREDIAVIRNYGNLLVEMSAIVPDGIVCFFT
SYIYMEMVVAAWYEQGILDQVQKQKLLFIETPDAAETSLALLNYQKACENGRGAVLLSVA
RGKVSEGIDFDHHYGRAVIMFGVPYVYTQSRILKARLEYLRDNFQIRENDFLTFDAMRHA
AQCVGRALRGKTDYGIMVFADKRFSRADKRGKIPRWIQEHLTDNLCNLSIDEAIQVSKHF
LRKMAQPFSRRDQLGLSLLTLEQLQSEETQKKIESKMQYV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaacgtggatggtctgttagtctactttccatatgactttatctaccctgaa
cagtacctttacatgttggaactcaaacgcacactggatgccaaggggcactgtgtactg
gagatgccctcaggaacaggaaagactgtctcccttctgtcgcttatcattgcctacatg
caggcctttccactggaagtcaacaaactgatctactgctccagaactgttccagaattg
gaaaaggtggtggaggagatgcggaacctgatagagtactatgagaaggagaccggggag
cagcctgacttcatcggggtggccctcagttctcgcaaaaacatgtgcatccatcctgat
gttagccaagacagagatggcaagtctgtggacgccaagtgtcacaagctgaccgcgtcc
tttgtgcgcgccgagcacaagaaggaccccatggtgcctgtgtgtgacttctttgaggag
tttgatggacatggaagagaggtgccaatgcctcctggtgtctggagcctggatgatctg
aaagaatacggcaaagagaaaggttactgcccatacttcctcgcccgacatgcgctacaa
agtgcacacgccatagtgtacagctactactacctgttggaccccaaggtggccgagcag
gtgtccaaggacctgtccaagaaagccgtcgtggtcttcgatgaggctcacaacattgac
aatgtgtgcattgagtctatgagtgtgaaactcaccaggaaaaccattgacagatgctca
caaaacattgacgatctgaccagcaaagtcaaaagaatgaaaaatgtggacgaggagaga
atccagaaggagtacgagaggatggtgcagggactcaaggacgctcaggttgccagggaa
acggatgttgtcttggcaaacccagtgctgccagatgaaattttacaagaggccgttcca
ggcaacatccgcaacgctgaccacttcctgagcttcatgaaacgcttcgtggagtacctc
aagaccaggctgcgcattcagcatgtcgtgtccgagactccgccctctttcctccgtgac
tgctctcagaaagtctgcatcgagcgaaaacctctcagattctgtgcagagaggcttcac
tcgctgatgcgtacactggagttgacagatctgaaggactactcggctctgtcggtggtg
gcaaactttgccactcttgtcagcacctacacgaaagggttcatgctgatcatggaaccg
tttgacgaccgcacgccgaccatctccaacccggtgctgcacctcagctgtctcgatgcc
tccatcgcggtcaaacccatcttcagcagattccagacgctggtcgtcacttcagggact
ttgtctcctttggagatgtatccaaagatcctggactttcacccggtcaccatggcaacc
ttcaccatgacactggccaggccctgcatctgtcccatggttgttagtaagggcaatgac
caagtggccatgacatccaagtttgagacccgtgaagatatagctgtgattcgtaactat
ggcaacctgctggtagagatgtcagccattgttccagatgggatcgtctgcttcttcacc
agttacatttacatggaaatggtggtggcagcgtggtatgaacagggaatcctggaccag
gttcagaagcagaagttactgttcatcgaaactccggatgctgcagaaacctcgctggct
cttctcaactaccagaaggcatgtgagaatgggagaggagctgttcttttgtctgttgca
aggggcaaggtgtcggaaggaatagattttgatcatcactatgggagagcggtcatcatg
tttggcgttccctatgtctacacccagagtcgtattctcaaagcccgactggagtacctg
cgtgacaactttcagatccgggagaacgattttctgacattcgacgcgatgcgtcacgct
gctcagtgtgtggggcgagccctgcgcggcaaaacggactacggcatcatggtttttgcc
gacaagcggttttcaagggcagacaaacgcggcaagataccgcggtggatccaggagcac
ctgacggacaacctgtgcaacctgtccattgacgaagccattcaggtgtccaaacacttc
ctcaggaagatggcacagcccttcagcaggagagatcagctgggcctctctctgctgacg
ctggaacaactgcagtctgaagaaacccagaagaagattgaaagcaagatgcagtacgtc
tga
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