Littorina saxatilis: 138952973
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Entry
138952973 CDS
T10665
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsax04131
]
138952973
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lsax04812
]
138952973
Enzymes [BR:
lsax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
138952973
Membrane trafficking [BR:
lsax04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
138952973
Cytoskeleton proteins [BR:
lsax04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
138952973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
TIP49
AAA_22
Mg_chelatase
AAA_14
AAA_2
IstB_IS21
AAA_16
NPHP3_N
MIT
DUF815
AAA_24
nSTAND3
Guanylate_kin
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
138952973
NCBI-ProteinID:
XP_070180840
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All DBs
Position
LG17:complement(42134724..42153032)
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AA seq
618 aa
AA seq
DB search
MQRKGPGPPRGFGRRRDGKGKKPPNRNYRSFHGQNIRVFAAPLLFIFAVLRTLAYQLWIV
LVLLRCRSRRALTLRSAGSRASDEESPCLSSPMASNDKGRHGVGPGEPALALQKHHHRKA
FEYISRALKIDEEDSARKDIAVEMYKKGIHELEKGIAVDVGGEGETFQRAKRLKEKMMTN
LVMAKDRLEVLDKLLQQMRVSSERRGERSADSRKHSQGDDIRLCSTPRPVGAVPKTKASN
ADRTHSQPQVSTKPMRVGRQAITVHKSNTLPRKKSGSKERKLSNMSPNPGRRPTHSRQSS
QPDTLKNNDGNRDVSNVKLKNCDKKLADLILSEIVDSGPRVDFKDVAGQETAKQALQEIV
ILPALRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVANESNSVFFNISASSLTSKWVGE
GEKLVRTLFVAARQLQPAIVFIDEIDSLLSERREGENEASRRLKTEFLVQFDGVSSSPED
RILIMGATNRPQELDDAVLRRFPKRVYVTIPDHGTRMAMLNYLLTKQGCNLVQNDLNHLA
TLTEGYSGSDLTALAKDAALGPIRELSMVEVRSVDANKVRDIKMSDFLEAVKRIRRSVPM
ETLVKYEQWNREYGDITV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaaagggacccgggcctccgagaggctttggacggcgaagagacggtaaaggc
aagaaaccgccgaaccgcaactacagatctttccacgggcaaaacatccgcgtttttgca
gccccgcttttgttcattttcgccgttttacggacgttagcgtaccagctttggatcgtt
ctggtgctcctccgctgccgcagcagacgagctttgactctgcggtcagctggctcgagg
gcgtctgatgaggaatctccttgtctgtcgtctcccatggcatccaacgacaagggccga
cacggggtaggtcccggggagcctgccttagcgctccagaagcatcaccacaggaaggca
ttcgagtacatctcccgtgctctcaagatcgatgaagaggactcagcgcgcaaagacatt
gcagtggaaatgtacaagaagggaatccatgagctggagaaaggcatagcagtggacgtc
ggtggggaaggtgaaacattccagcgagccaaacgcttgaaagagaagatgatgaccaac
ttggtgatggccaaagacaggctggaagtattagacaagttgttgcaacaaatgagagtg
tcctctgaaaggagaggtgaaaggagtgctgatagcagaaaacactcgcagggggatgac
atacgtttatgcagtacgcctcgtccagtgggggccgtccccaaaactaaagcatcaaac
gctgaccgcactcattcacagcctcaagtgtcgacgaagccaatgagagtaggtcgccag
gccataacagttcacaaaagcaacactttgcctcgcaaaaagtctggcagcaaggagaga
aagctgtcaaatatgtctccaaaccctgggagacgacccactcactctcggcagtcttca
cagccagatacgttgaaaaacaacgatggaaatcgagacgtatcaaacgtgaaactgaag
aactgtgacaagaagctggcagatctcattctcagtgagatagtggacagcggccctcga
gtggacttcaaggatgttgctggtcaagaaacagctaagcaggccttgcaggagattgtc
atcctgcctgccctaagaccagagctgttcacgggtttgcgagcacctgccagaggtctg
ctgctgtttggaccaccgggtaatggaaagaccatgctagcaaaagctgtggcgaatgag
tccaactctgtcttcttcaacatcagtgcttcgagcttaacatcaaaatgggtaggagaa
ggggagaagttagtgcggacactgtttgtggcagcccgacaactccaaccagccattgtc
ttcattgatgaaattgattccttgctgtctgagagaagggagggggagaatgaagctagt
cgtcgactaaagacagagtttctggtgcagttcgatggtgtgtcttcaagtccagaagat
cgcatcctgatcatgggagccacaaaccgtccgcaagaactggatgatgctgtcctcaga
cggtttcccaagcgtgtgtacgtgaccataccagaccatggcacacgtatggcgatgctg
aattacttgctgaccaaacaaggatgcaacctggtgcagaacgaccttaaccacctggcc
actctaactgaaggctactctggcagtgatctaacagctcttgccaaggatgcagctttg
ggacccatcagagaactgagcatggttgaggttcggtctgtggatgcaaacaaggtgaga
gacataaagatgtccgacttcctggaagctgtcaaaagaatccgacgcagtgtccccatg
gagactttggtgaagtacgaacagtggaacagagaatatggcgacatcactgtatga
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