Littorina saxatilis: 138953453
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Entry
138953453 CDS
T10665
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin A-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
lsax Littorina saxatilis
Pathway
lsax04120
Ubiquitin mediated proteolysis
lsax04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
138953453
04120 Ubiquitin mediated proteolysis
138953453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lsax04121
]
138953453
Enzymes [BR:
lsax01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138953453
Ubiquitin system [BR:
lsax04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138953453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-RING_16
zf-C3HC4_3
zf-RING_5
zf-HC5HC2H
zf-RING_11
zf-RING-like
FANCL_C
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
138953453
NCBI-ProteinID:
XP_070181374
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Position
LG17:complement(46036970..46057606)
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AA seq
633 aa
AA seq
DB search
MRSFVLSGISFVMTGAVIANAYYQKKQFYPSVVYITKSNPSMAVIYIQAFVFVILMGKLL
RKIFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLAE
DRVDFMERSPVISFLFHVRVMSLLAFLASLDMYFVNYAYYSTLLKGPTVQLVFGFEYAIL
MTVVVMTFIKYILHTIDMQNENPWDNKAVYILYTELVVGLTRVVLYFCFMAIMIKVHTFP
LFAIRPMYLAIRSFKKALHDVIMSRRAIRNMNTLYPNATEEELAAGDNVCIICREDMTTA
CKKLPCNHIFHSSCLRSWFQRQQTCPTCRLDVLRMPRATTPQTPVAGAENAAQQQQQQFF
QNMQGFGGFPYAWPQNQAAQANGQPPQQAPQENAQPGTTGASTNTTATPSAPAASGTTPP
PPPFFPSMPFFMPQSMPFYGFPPPPSNLSGLSEEELRGMEGNERGNVEARIQWLRDIQAL
LDGAMVLIGQYNQVASSMGMSGIQTSQQSSAPPPSAAAATTTTTTAASPTWQVKPEDSGA
KQKKSKADSQAGDMAKSNSPSSSAAANGTNTEEKLDFSGLEGATGYTPPQEVPAWEDPRE
EEHEDELHEVRRRRLQRFSQDGHPANADNIDLD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcgtttgtgctttcggggattagttttgtaatgactggtgcagtcattgcaaat
gcctattaccagaagaaacagttttatccttcagtcgtgtacatcaccaaatccaaccct
agtatggcagtaatttatatacaagcatttgtctttgttatcctgatgggaaaactgctc
agaaagatcttctttggccagctcagagctgcagaaatggagcatctgatagagagatcg
tggtacgcagtaacagagacttgcctggcgttcactgtgttcagagatgacttcagtcct
cgctttgtggcactctttacactcctcctcttcctcaagtgctttcactggctggcagaa
gacagagtcgattttatggaaagaagcccagtgatttcttttctcttccacgtgcgagtg
atgtcattgttggccttcctggcttcactcgacatgtattttgtgaactacgcctactac
tccactctgctgaaaggaccgaccgtgcagctcgtctttggctttgagtatgccatcttg
atgacggtggtggtcatgacgttcatcaagtacatcttacacacaatagacatgcagaac
gaaaacccctgggacaacaaagcagtctacattctctatactgaacttgtcgtgggtctg
actcgtgtggtactgtacttctgcttcatggccatcatgatcaaggtgcacaccttcccg
ctcttcgccatcaggcccatgtatctcgccatcaggtccttcaagaaggcacttcatgat
gtcatcatgtctcgcagagccattcgaaacatgaatacattgtatccaaatgcaacagaa
gaagaactggctgcaggggataacgtgtgcatcatctgtcgtgaggacatgacaacagcc
tgcaagaaacttccatgcaaccacatcttccattccagctgtctgcgctcctggttccag
cgccagcagacctgtcccacctgccgtctcgatgttctgcgaatgccaagggccaccacc
ccccagactccagtggcaggcgctgaaaacgccgctcaacaacagcagcagcagttcttc
cagaacatgcaaggttttggaggtttcccttatgcgtggccccaaaaccaggcagcccag
gccaacggacaacccccccagcaggctccgcaggagaacgcacaaccaggcacaacaggg
gcttcaactaacaccactgctacaccctcggctcctgcagcttctggcacaacaccgccc
cctcctccattcttcccctccatgccgttcttcatgccacagtctatgccattctatggt
tttccaccacccccttccaacctgagtggactaagcgaggaagagttgcggggtatggaa
ggaaacgagcggggaaacgtggaagctcgaatccagtggttacgagacattcaggctctg
cttgatggtgctatggtgcttatcggccagtacaatcaagtggcgtctagcatgggcatg
tctggcattcagacatctcagcagtcatcagcaccaccgccatcagcagcagcagcaaca
acgacaacaactacagcagcatctccaacgtggcaagtcaaaccagaagatagtggtgcc
aaacagaagaaaagtaaagcggattctcaggccggtgacatggcaaaaagtaattctcca
tcttcgtctgctgctgctaatggcaccaacacagaagaaaaattagatttctctgggcta
gagggcgccacaggctatacgccacctcaggaagttcctgcatgggaagacccacgggag
gaagaacacgaagatgaactgcacgaggtcaggcgccgacgactccagcgtttctcgcaa
gatggtcacccagcaaacgcagataacattgacctggactga
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