Littorina saxatilis: 138953460
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Entry
138953460 CDS
T10665
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lsax03016
]
138953460
03036 Chromosome and associated proteins [BR:
lsax03036
]
138953460
Enzymes [BR:
lsax01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
138953460
Transfer RNA biogenesis [BR:
lsax03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
138953460
Chromosome and associated proteins [BR:
lsax03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
138953460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
138953460
NCBI-ProteinID:
XP_070181384
LinkDB
All DBs
Position
LG17:complement(11829619..11859499)
Genome browser
AA seq
1594 aa
AA seq
DB search
MSGSGKETNIIAGLNTVIDVDLQQTIKRVKNDLLNDNTPFGFDLFKKHSQSLRTLQELID
VAPETGTDEEKVKGERNAVEGLISDVCLPFLRSFAPSYDGRADLFAALLNICDMTLVCLK
RSSQEMIVKVLELCLQSLIAYHRECSRHSDSGSDQALDILCALELLCTTLEVPSLPHNNQ
NDELYHRIFSAALSILSHLEEKTANRLISFVIVRLIQQQTRERNVYLQETWKLVEADVHA
HDKGKRKLSTRNLQQHLTMMCSMANFFFPLTSETVSPDVRQCQAFWELVQLGLYHENPAI
RKRSAYLLKRIIDTCEKSDVDFNPPDLSSGASSLPYFWWSKKQQERLSKVWEDALLLLET
LDEKQTHVIKPILPRMQTLLDASKKENGSVLLHTSWIVTILMRAFSHESVFIVRWASDTV
LFMDFTAVPFMEQGQLQFLTQQLLGFLQDLKLYQRPDGSPAGSCTSVGTGLKQFFANVCK
SLESKQQKVEFVEHVLSVLVKDNWSSVPLVFITQGVSCISPDAILGQQALITVREIVNIS
LTSLENIFRGAIECFMTKTVLSLLDKDAVSVDEFMETLAVLERDESLQRGTQLWSTVVSW
LLTAATEKDRSTWSWSAMEKTLTAMVDSYLTVSTDATGSPLAETGRVTKIARFVALMSDC
EYKMKQNKMDNRGKEDGKPLLTATVLKAVDVVNNINVRVYMPVLKADRAIFLLLSCAKEL
GKGKNGMQDPSQKELCDLVHGCWNELLTFVEKRTLLGKQESEQDHVDLDLVIFYADAVKT
LGELLPVGAGVNGLTKAVDACTKVMDTSSTASPLQQVAALSLLSAVAQVVGTELRREARA
HNSVKSEGLQDLSNKLWKLFSTMSLDCDIFTGHTGGSSAHQGRHVCQYMMSLWQCLRVLL
THKPGVREASLVLHAALEAFSVSSGECDMPIMHCLELVMPELLQGVDHHAKVIQVIRIAW
GKVYEEIKSWSFWLKMEAYVNMTLQKPLLVLMDEEDVELGVYMNEVLERFFEVGQEKAGM
LNLVIARLCQLWAEPEGIALATKMVSTIVDACMFGTVHKKAERLCLDVYMYIETLKENCS
VNEILSSSSKNDVYVRLAAINFLSSLKPGVAEHKRLAMAVLEEGWKRYEELYQMSTFRQF
TNSLPHLHKHRAVQIFPVLDQFIGKDLCLDFCKQTWDALVLECHPSVRQNLEWLLMRLVH
RYPQELLPFLWKCFDQFSDKRNISLISLLHIVTRVGPELPVDLREDFYMEAIPLVMPWTM
AHHFNTRLHGQAAIYKLWGQCQEMKLKARQYKVVESCVKFLNENGNSSAVLGKLMGNYFY
SHFNFLRDYSMETMFYTLPRLACLCDIEWMHPDLFHQLDASWQINGDSHLMPLYNESKTL
AACEPGPWKMKATTESFEDTETTDGDVQKKIIPWRLMTPDSSAEQEYSHRRKGRNQDGLV
LVTSLINKIPNLGGLCRTSEIFGVSEFVIGNLSYTDDRMFQTLSVTAEKWIPITEVQFFR
LGEFLEEKKRESYTLVGVEQTANSVDLTKYKFPKKTLLVLGNEKEGIPPDILQQLDVCVE
IPQQGIIRSLNVHVSGALLVWEYTRQQMENSDAE
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaagcggaaaagaaacaaacattattgctggactgaacaccgtgatcgatgtt
gatctccagcagacgatcaagcgtgtaaaaaacgatttgctcaacgacaacacgccgttt
ggttttgacttgttcaagaagcattcccagtctcttagaactttgcaagaactcatagat
gtggcgcctgaaacgggaacggatgaagagaaagtgaaaggagaaagaaacgctgtggaa
ggccttatttctgatgtgtgcctgccatttctccgctcctttgccccatcttatgacggg
agagcagatctgtttgcggcgttgctcaacatctgtgatatgaccctagtgtgcttgaaa
cggtcttctcaggaaatgatagtcaaggttctagaactgtgcttgcagtctttgatagca
taccaccgcgagtgttcaagacattctgacagtggttctgatcaagcacttgacatactg
tgtgctctagaacttttgtgcacaaccctagaagtgccctcattgccgcacaacaaccag
aacgatgagctctatcacagaatattctctgccgccttgtccattttgtcccacctggag
gaaaaaacagccaaccgtctcatctcatttgtcatcgtcagactcattcagcagcagacc
agggaaagaaacgtctaccttcaagagacttggaagctagttgaagcagatgtccatgca
cacgacaaaggaaaaagaaaactgtccaccagaaatttgcagcagcatctcactatgatg
tgtagcatggccaactttttcttccctctgaccagtgagacagtaagcccagacgtccgg
cagtgccaggctttctgggaacttgtccagctaggactctaccatgagaacccagccatc
aggaaacggtccgcgtacctgttgaagagaatcattgacacctgcgagaagtcagatgta
gacttcaacccaccagatctgtcttcaggtgccagctctctgccatacttctggtggagc
aagaagcagcaggaacgtctgtccaaggtctgggaagatgcacttctcttgctcgagact
ttggatgagaagcagacccacgtgatcaagccaattttgccacgcatgcagactttgctc
gatgcttccaaaaaggaaaatggttctgtgcttctacacacatcatggatagtgacaatt
ctgatgagagcatttagccatgagagtgtgttcattgtgcggtgggcgtcggatacagtt
ctgttcatggacttcactgctgtccccttcatggagcagggacagctacagtttctaaca
cagcagctgctaggcttcctccaggatctgaaattataccaaaggcctgatggttcacca
gcaggatcctgcacatcagtgggaacaggtctcaaacagttctttgccaacgtgtgcaag
tcactggaaagtaaacagcaaaaagtggagtttgttgagcatgtcctctccgtcttggtg
aaagataactggtcttctgtgccgctggtgttcatcacacagggcgtgtcctgcatcagt
cctgacgctattctcggtcaacaggccctcattactgtcagggagattgtcaacataagc
ctgacctctcttgaaaacatcttcagaggagctattgagtgtttcatgaccaaaactgtc
ctcagcctgcttgataaggatgctgtgtcagtggatgagttcatggaaacattagcagtt
ctggagagggatgagagcctacagagaggaacacagctatggtccacagtggtttcctgg
ctcctgacagcagcgacagaaaaggaccgctccacctggagctggtcagcgatggagaaa
acattgacggccatggtggatagttacctcactgtgtcaacagacgctaccggaagtcct
ctggctgaaactgggagggtcacaaaaattgctaggtttgttgcgctgatgtctgactgt
gaatacaaaatgaaacagaacaaaatggacaacagaggcaaagaagatggcaaaccctta
ctgactgcaaccgtgctgaaagctgtggatgttgtcaataacatcaacgtcagggtgtac
atgccagtactgaaggctgacagagccatcttcctgcttctgtcctgtgccaaggagttg
ggaaaaggcaaaaatggaatgcaagaccccagtcagaaagagctgtgtgatcttgttcac
ggttgctggaatgagctactcacttttgtagagaaaagaacgctgctgggcaaacaagag
agtgagcaggaccatgttgaccttgaccttgtgatattttacgctgacgctgtcaaaact
ctgggagagcttctgcctgtgggtgctggtgtgaatggtctgaccaaggctgtggacgct
tgcaccaaggtcatggacacgtcttcaacagcatctcctctgcagcaagtggcggctctc
agcttgttgtcggcggtagctcaggtggtgggtacagaattgaggagagaggctagggcg
cacaacagtgtcaaatcagagggactgcaggatctatccaacaagctgtggaaacttttc
tccactatgtctctggattgtgacatcttcacagggcatacagggggcagctcagctcac
caaggtcgacatgtttgtcagtacatgatgtcactgtggcagtgtctgcgtgttcttctc
acacataagccaggtgtgcgtgaagcttcgctcgtcttgcacgcagccctggaggcattc
tctgtcagttccggagagtgtgatatgcccatcatgcattgtttggagcttgtcatgcca
gagctcctgcaaggtgtggatcaccacgctaaggtgatacaggtgataaggatagcgtgg
ggcaaggtgtacgaggaaatcaagtcgtggagtttctggctcaagatggaggcgtacgtc
aacatgacgctgcagaaacctctcctcgtgctcatggatgaggaggatgtggagcttggg
gtgtacatgaatgaggtgctggaaagattctttgaggtggggcaagagaaagctggcatg
ctgaacctggtgattgctcgtctgtgtcagctgtgggcagagccagaaggcatcgcgctg
gccacaaagatggtatccaccattgttgatgcctgcatgtttggaacagtgcacaaaaag
gcagagagattgtgcttggatgtctacatgtacattgaaaccctgaaagagaactgctct
gtcaatgaaatactgtccagctcatcaaagaatgatgtgtacgtccgactggctgcaatc
aacttcttgtcatcgctgaagcctggtgttgccgaacacaagaggcttgccatggcagtg
ctggaggaaggctggaagcggtacgaggagctgtaccaaatgtctaccttcaggcagttc
accaactccctgccccacctccacaaacacagggcggtgcagatcttccctgtgctggat
cagttcattggcaaggacttgtgccttgacttctgcaaacaaacgtgggatgccttagtg
ctggagtgccacccctctgtgcgccagaacctggagtggctgttgatgagactggttcac
agatatccccaggaactgctgcctttcttgtggaaatgcttcgaccagttttcagacaag
cgcaacatcagcctgatttctttgcttcacatcgtcacacgcgtgggaccagagctccca
gtggacctcagggaggatttctacatggaagccattcccttggtgatgccatggacaatg
gcccatcatttcaacactcgtctgcacggtcaggcagccatatacaagctgtggggacag
tgccaagagatgaagctcaaagcccgacagtacaaagttgtggagagctgcgtcaaattt
ctgaatgaaaatggcaattcttcagcagtgctgggaaaactgatgggcaactatttctac
agtcatttcaacttcttgagagattacagtatggagacaatgttctacacactaccacgg
ttggcatgtctgtgtgacatagaatggatgcatccagacctgttccaccagttggacgcc
tcatggcagataaatggcgactctcatctcatgccactctacaacgaaagcaaaactcta
gcggcctgtgaacctggcccttggaaaatgaaagcaacaacggagagctttgaagacaca
gagacaacggacggagacgtccagaagaagattattccctggaggctgatgacgccggac
agcagtgcagagcaagagtacagtcaccgcaggaagggtcgtaatcaggacgggctggtg
ctggtcacctctctcatcaacaagattcccaaccttggaggcctgtgtcgcaccagtgag
atttttggcgtgtccgagtttgtcatcggcaacctgagctacaccgacgaccgcatgttt
cagactctgagcgtcacagcagaaaagtggattcctatcacagaggtgcaatttttccgg
ctgggtgaattcctggaagagaagaagcgagagagctacacgctggtgggagtggaacag
acagccaacagtgttgacctcaccaagtacaagttcccaaagaaaactctccttgttcta
gggaatgagaaggagggaatcccccctgacattctgcagcagctggatgtgtgtgtggag
atcccccagcaaggaatcatccgatccctcaacgttcatgtcagtggtgctctcctggtg
tgggaatacacgcgacaacagatggaaaactctgatgcagagtag
DBGET
integrated database retrieval system
