Littorina saxatilis: 138953856
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Entry
138953856 CDS
T10665
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138953856
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138953856
Factors involved in mRNA localization
Other mRNA localization factors
138953856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
CpG_bind_C
Motif
Other DBs
NCBI-GeneID:
138953856
NCBI-ProteinID:
XP_070181914
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All DBs
Position
LG17:complement(13985919..14028682)
Genome browser
AA seq
1267 aa
AA seq
DB search
MEVEKMEKVDLTSALENVDALDEFMLQDEQPVIEAVNEPLHYGANLDSNFTDRAAFVCAQ
AKYIEQATVQADLNLLLEEGEEYAVMLYTWRSCSRAFPQVHSNEQQNRLQIYQTIVEIME
PQINKLMQFMFFQRRAIDTFCGEVKRLCHKEKRNDLVSEAYLLTLGKFINMFAELDELKN
VKSSVCNDYSAYKRAAQCLKSTMDMESLKESQNLSMNLATKNSIRDTLRGNLAAIPGHED
LLADIVNTCVHMYESRMYLEPAEKYQLVKVMAVGLYLLDREEGANIYKMDAKKRINSISK
IDKILKELTFVPLYGDMQIAPYQYISKTPNFDAGKWPCCESSSASPQSNLMPSLSIIRAD
HLQFISQLARLNNESTTTTREKPRTDQENKELTNLALRGLQLLSAWTQQVMELNSWKLMN
PTEPGRNKDCPQNAEPYERATRYNYSREEKFALVEIIAMIKGLQLLMCRMEAIFMDAIRR
HIYLQLQELVQLFLRDPLRKAIKKKNDIIERILKSVRDTCADWYRGTEPQGDPAMQGKKD
PDGGFPIKLPRRNADPSSTQLYMVRTMLESLIGMKALRKEMDQRHLAHIEDFHQLSFHWH
YLINFNRSLFNCCDLSQLWYREFFLEMTMGSRIQFPIEMSMPWVLTDHILETREPAMMEY
ILYPMDLYNDSAQYALHRFRRQFLYDEIEAEVNLCFDQFVYKLSDQILVYYKHLAGSILL
DKRYRAELMSAGEKISYPPPNRYKTLLKQRHVQLLGRSIDLNRLIAQQVTTALKNALNVA
IGRFEAGDLTGIMELEALLACNRLTHQMLGEHLELMDFNAMLQEANHSVSAPYGRITLHI
FWELNYDLLPNYCYNGSTDRFVKVPEIFQKVSKRDKAPSSSPFNLFGSKRLNTSFNTIFS
MYSEFIGMPHLRVMCRMLGYQGVAVVIEELFRCAEAFLKGIMLDYMKQLMKVMPEKCKLQ
SYSYSSPGILQYYLALLNDIMQYTDLKTEVFQGLKEIGNTVIFCRLTERAFNQEETIDLM
TAGPFENNLPKPHVPTKKEGTKDPKDSKEVERELKAAISQLEKKYASLQVVPLTKKLGTP
VQVDIVSQADVLTRERLCCGLSIFKQLMKRLKDILTDPLWHGQPATTGTFNVDECSEFHR
MWSAINFFICLPVGEHEYTIEQMFGEGLTWAGCTLITVLGQQERFEMLDFSYHLLQVNRV
DMKTIKDDNVKGFSLKKTVDRIRKFQILNTQVFSMLNNFHQRRSDNVPVEQIRCFVPPIH
PSVATNV
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggaaaagatggagaaagtggacctcaccagtgcgctggaaaatgtggatgcg
ttggatgaattcatgctgcaagatgaacagcctgtcattgaggctgtcaacgagccgctg
cattatggtgcaaatcttgacagcaactttacagacagggcggcttttgtgtgtgctcag
gccaagtacattgagcaggctactgtgcaggcagaccttaacttgttgctggaggaggga
gaagaatatgctgtgatgctgtacacatggagaagttgttcccgggcctttccacaggtt
cacagcaatgagcaacagaaccgtctacaaatttatcagacaattgtggaaatcatggaa
cctcaaatcaacaagctcatgcagttcatgttctttcagcgccgtgccatagacacgttc
tgtggagaagtgaagcgtctgtgtcacaaggagaagcgcaatgatctggtgtcagaggcc
tacctcctgacgcttggcaaattcatcaacatgtttgcagagcttgatgaactcaagaat
gtcaaatccagtgtctgcaacgattattctgcctacaaaagagctgctcagtgcctgaaa
tccaccatggacatggagtcgctcaaagagtcgcagaatctcagcatgaacctggccacc
aagaacagcatccgcgacacgctgcggggaaatctggcagccatcccaggtcacgaggac
cttctggccgacattgtcaacacctgtgtacacatgtacgagtcacgcatgtacctggag
cctgcggagaaataccaactagtcaaggtgatggcggtgggtctttacctgctggacaga
gaggaaggggccaacatctacaaaatggatgccaagaagcgaatcaacagcataagcaaa
attgacaagatcctcaaggagctgacatttgtcccactctacggagacatgcagatcgct
ccctaccagtacatcagcaagacgcccaactttgacgccggcaagtggccgtgttgcgag
tccagctccgcaagccctcagtccaacctgatgcccagtctcagcatcatcagggctgac
cacttgcagttcatcagtcagctggccaggctcaataatgagtctacaacgaccacccgt
gagaagccgcgcactgaccaggagaacaaggagctgaccaacctggctttacgcggtctg
cagctgctctcagcctggacacagcaagtgatggaactgaattcctggaaactgatgaac
cccacggagccaggcagaaacaaagattgcccccagaatgcagagccttacgaaagggca
actcgctacaactacagtcgtgaagagaagtttgccctggtggagattattgccatgatc
aaagggctgcaactcttgatgtgtcgcatggaagccattttcatggacgccatccgacga
cacatctatcttcagctgcaggagctggtgcagctttttctgcgggatcctctgcgcaag
gccatcaaaaagaagaatgacattattgaaagaatcctgaagtctgtgcgagacacgtgt
gcagactggtacagaggcacagaaccccagggcgacccagccatgcagggcaagaaagat
cctgacggtggttttcccatcaagcttcctcgcagaaatgctgacccttcttctacccag
ctttacatggtacgtaccatgctggagtcgctgatcgggatgaaggcgctgcgcaaagag
atggatcagcgacacctggctcacatagaggacttccaccagctctccttccactggcac
tacctcatcaacttcaacaggtcactattcaactgctgcgacttgtctcagttgtggtac
agggaattcttcttggaaatgacgatgggttctcgcattcagtttcccattgagatgtcc
atgccctgggtgctaacagaccacattctggagaccagagaaccggcaatgatggagtat
atcctgtaccccatggacttgtacaacgacagcgctcagtacgctctccaccgcttccgc
agacagttcctgtatgacgagattgaagctgaggtcaacttgtgctttgatcagtttgtc
tacaaactgagcgaccaaattctggtgtactacaagcatctggctggcagcattcttctg
gacaaacgttaccgtgcagaattgatgagtgccggtgagaagatttcctatccgcctcca
aatcgctacaagactttgctcaagcagaggcatgttcagttactgggtcgttccatcgac
ctcaaccgactgattgcccagcaggtaaccacagctttgaagaacgcgctgaacgtagca
attgggcgctttgaggctggcgatctcaccggtataatggaactggaggcactgttggcg
tgcaaccgccttacgcatcagatgttgggagagcacctggagttgatggacttcaacgcc
atgttgcaagaagccaaccacagcgtctcggctccgtacggccgcatcactctccacatc
ttctgggagctcaactatgatctgctgcccaactactgctacaacgggtccactgacagg
tttgtgaaagtgccagaaatctttcagaaagtgagcaaacgggacaaggctcccagttct
tctcccttcaacctctttggcagcaagcgactcaacacctcgttcaacaccatcttcagc
atgtactctgagttcatcggcatgccgcatctgcgtgtcatgtgtcgcatgctgggctac
caaggcgtcgctgtcgtcatcgaggagctcttcagatgcgcagaagccttcctgaaagga
atcatgcttgactacatgaaacagctgatgaaggtcatgccggagaagtgcaagttgcag
agctactcctacagctcaccaggtattctgcagtactacctggccctgctgaatgacatc
atgcagtatacagacctcaagacagaggtcttccagggcctcaaggaaatcggcaacacc
gtcattttctgtaggcttacagaacgggctttcaaccaagaggagacaatagacttaatg
acggcaggtccatttgaaaacaacctcccaaaaccccatgtgccgaccaagaaggaggga
acaaaggaccctaaagattccaaggaagtagagagagagttgaaagcagccatttcccag
ctggagaaaaagtatgcctcccttcaagtggttcctctcaccaagaagctgggaactcct
gtgcaagtggacatcgtttcccaagcagatgtcctgactcgtgaacgcctgtgctgtggt
ctgtccatcttcaagcagctgatgaagcggctcaaggacattcttaccgaccctctgtgg
cacggtcagcctgcaaccactggtactttcaacgttgacgagtgcagtgaatttcatcgt
atgtggagcgccatcaatttcttcatatgtctgcctgtcggggagcatgagtacaccatt
gaacagatgtttggagagggtctgacgtgggcagggtgcacactgatcacggtgctcggt
caacaggaacgctttgaaatgctggacttcagctaccacctgctgcaagtcaaccgcgtc
gacatgaagaccatcaaggatgataacgtcaaaggatttagcttgaagaagacggtggac
cgtatccgcaagtttcagatcctgaacacacaagtcttctctatgctcaacaacttccac
cagcgacgcagcgacaatgtgcctgtggagcagattcgttgcttcgttccccccatccac
ccctctgtcgccaccaacgtgtga
DBGET
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