Littorina saxatilis: 138954898
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Entry
138954898 CDS
T10665
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
lsax Littorina saxatilis
Brite
Transcription machinery [BR:
lsax03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
138954898
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138954898
NCBI-ProteinID:
XP_070182750
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Position
LG2:complement(93132494..93186307)
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AA seq
1891 aa
AA seq
DB search
MTTRLDRLFLLLDTGSTPLIRKSAAEQLGEVQRLHPYELNNLLAKVHGYLRNNSWETRVA
AGQALEAIAKNVPQWAPQGVPKADPESTPAAHIAGRILFSQFNIQRVLNYGTSLLGCEGA
QYDMDLSGAGVEDKERLSQQRMLLNKRLGLDMAGSLGIDTSNLFNDDDLRVGPVDPQQTP
PASPPLSQPAAELVKQQLASVISGTRRRSLAARLKSVDSDRSAGGAAKRIKMEAEDDDKK
LVVDVGDNTVNPEEMEEWPFQWFCEALMNNLFHSSWEVRHGAATGLREIIKIHGSGAGKA
SDIPVDQMESVNQTWLSDVSLRLLSVMALDRFGDFVSDEVVAPVRETCAQTVGVIARCLT
VEGVRGMMEVVLQLLGQQQWEVRHGGLLSLKYILAIRQDLTSLLLPLVVPAVFRGLQDPD
DDVRAVAAASLIPVADKLVLLLPDQVPSVVACLWETLLDLDDLTASTNSIMTLLSKLLAQ
PSTPALGNLSQSLTDLVPRLWPFLKHNIASVRRATLDTMLTLLSSSAPQLCEWVTPILQD
AVRHIYQRSLLESSQELLALVERVWGALMQAVHPSYLVAAATPWLGVWLCLLMQPAKIPY
DAAYLIEAKHRTKDTNMAGKLRPVPEGQKMAGPTGDQRDYIGGSDVASSDSDHKVDRVTR
ARVTGARLLGNLASYICLPDIALPPEMEPPVVSLSKLCIFHLNTKSALQRLAIAQVVFHW
AQQPIPCQCPESLKTRLLECLNETVYFDEIALAFTRMQTDVRDFLACLKQEGINLETMFP
TNMVVSLEQAMHLVTAVYDQVKATLKPRVLPSFTERRRQLHAVVSATNNDQQMLSVRVLC
SLAMAMVSLQSLPEKLNPVIRPMMEAVKKEENAEMRRQAAKCLASVMQSCLVRTPNPSAK
IVKNLCGFLCCDPTLTPSVTSPMLQKPTELSPLEVTCDAQNGILTLTNLQKAPEQSRRGF
RRSVSVKEVEKKAGGSSVPDVVSLPDLSPPQEDPETQKQLTTQRLGSEAALTTICGHFGN
TLPQQLPDLWATCAQPLQSSAPSTETDQRASETHQELVNALQLLETVTPTLHSDLLNQVL
DQMDTLSGHLHHISTSVRHMAARVFAVLSVQRTSTVLTFFIEHILPQLGAMHDIRMRQGA
SEALSNILDQLGLRVVPYIVLMMVPVLGRMADHDSSVRLMATHCFATLIRLMPLEAGIPD
PPELKPSLAARREQERQFLEQLLDSSKLEPYKITVPIKAELRKYQLDGVNWLGFLNKYQL
HGILCDDMGLGKTLQSLCVLATDHQRRQKLHEETKSPDSAPLSSIVICPPTLVGHWVYEV
KKFVDAEYLNPLMYAGPPAERIKLQKKVKKHNLIVASYDVVRNDIDFFSALRWNYCILDE
GHVIRNGKTKLSKATKQLISMHRLILSGTPIQNNVLDLWSLFDFLMPGFLGTEKQFQARY
GKPILLSREAKSTSKEQEAGALAMEKLHRQVLPFILRRMKEDVLNDLPPKIIQDYYCDLS
PLQIQWHKSDLVPAQQFCYLGMAFDTVLYTVSPSPDRILSLRRKILSIQACRAVPHRRLA
ELLGSMESVALLLPLARLHKRPLQRACMLQALLYLRKVCNHPALVLSNSHPKYSEVMNRL
TQQRTSLHDMLHAPKLTALRQLLLDCGIGVSASGGASSSAAECAMDTDVPVVGQHRVLLF
CQLKGMLDIVEKDLLKVHMPGVTYLRLDGSVPAGSRHDIVHRFNNDPSIDMLLLTTHVGG
LGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRGTLEDKIMGLQKF
KMSIANTVIGQDNSSLQTMSTDQLLDLFTLDDQGKVTSVGSNPYSGPTELSGSGTSKRGG
MRAVMDSLEELWDEQQYESEYNLENFMKTLT
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaggttggatcgtctgttcctgttgctggacacagggtcgacaccgctgatt
cgcaagtctgcggccgagcagcttggggaggttcagcgactccatccctatgagctcaac
aatctcctggcaaaggtccacggttatctacgcaacaacagctgggaaaccagggttgcc
gcaggtcaggctttggaagccatcgccaaaaatgttccacagtgggcaccgcaaggggta
cccaaggctgatcctgagagcactcctgcagctcacatagcaggacgcatcctgttctcc
cagttcaacatccagcgagtgctcaactatggcacgtctctgctgggctgcgagggggca
cagtacgacatggacctgtccggtgcaggtgttgaggacaaggaacgactgtcccagcaa
cgcatgctgctcaacaaacgcctaggcttggacatggctggctctctgggcatagacacc
tcgaaccttttcaacgacgatgacctcagggtgggccccgttgacccccagcagacaccc
cctgcctcacccccactctcgcagcctgctgctgaactggtgaagcaacaattggcgtct
gtgatcagtggtaccaggcggaggtctcttgctgcacgtctcaaatctgtggacagtgac
cgtagtgctgggggggctgctaaacgcatcaaaatggaggcagaagatgatgacaagaaa
ctggtggtggatgtgggtgacaacactgtcaaccctgaggagatggaagagtggccattc
cagtggttttgcgaggcgttgatgaacaacttgttccacagtagctgggaggttcgtcat
ggtgccgctacaggtctcagagaaatcatcaaaattcatggcagcggcgctggcaaagct
agcgatattcctgttgatcagatggaatctgtgaatcagacttggctgtctgatgtctcc
ctgagactgctcagtgtgatggctctggataggtttggagactttgtgtctgatgaggtg
gtagcccctgtgcgtgagacatgtgcccagacagtaggtgtgattgcacgctgcctgacg
gtggagggggtgagggggatgatggaggtggtgctacagcttcttggtcagcagcagtgg
gaggtcagacatggcggtctgctcagcctcaagtacatcctggccatcagacaggacttg
acaagcttgctgcttccactggttgtgcctgcggtgttccgaggtctgcaggacccagac
gatgatgtccgcgctgtggccgcagcgtccctcatccctgtggctgacaagctggtcctc
cttctgccagaccaggtgccgtcagtagtggcatgcctgtgggaaacgttgctggacctg
gatgacctgacagcgtccaccaacagtattatgaccctgttgtcaaagctacttgctcag
ccctctacccctgctctaggaaacctctctcagtcgctgactgatctggtgccccgattg
tggccgttcctcaaacacaacatcgccagtgtgcgacgagccacattggacacaatgctt
accctgctctcgtccagtgctcctcagctgtgtgaatgggtgaccccaatcctgcaggat
gcagttcgtcacatctaccagcgaagcttgctggagtctagccaagaacttctggccctt
gtggagcgagtgtggggggctctgatgcaggccgtccatccctcctacctggtcgccgct
gcaacgccttggctgggagtctggctgtgcctgttgatgcagccggctaaaataccttac
gacgctgcttatctgattgaagccaaacacagaacaaaggacaccaacatggcaggaaaa
ctgcgaccagtgcccgaaggccagaaaatggcgggccccaccggagatcaacgggactac
atcggtggcagtgatgttgcaagttctgactccgatcacaaggttgatcgcgtcaccagg
gcgcgagtcactggtgccagactgctgggcaacctggccagctacatctgtctgcccgac
attgcgctgcccccagaaatggagccgcctgtggtgtcgctgagcaagctgtgcatcttc
cacctcaacaccaagtcggccttgcagcggctcgccatcgctcaggtggtcttccactgg
gctcagcaacccattccctgtcagtgcccagagtccctgaaaactcgcttactggagtgc
ctgaatgagacggtgtattttgatgagattgctctggccttcacgcgcatgcagacggat
gtgcgagacttcctggcttgtctcaaacaagaaggaattaatttggaaaccatgtttcct
accaacatggttgtcagcctggagcaggccatgcacctagtgacggcggtgtacgaccag
gtgaaggccactctcaagccccgcgtcctgcccagcttcactgaacgacgacggcagctt
cacgctgtggtcagcgctaccaacaacgaccagcagatgctcagcgtcagggtgctgtgt
agcctggccatggccatggtcagcctacagtcgctaccagagaagctcaacccggtcatc
cggcccatgatggaggcggtcaagaaagaggagaacgctgagatgcgcagacaggcggcc
aagtgtctggccagcgtcatgcagagctgtctggttcgaaccccgaaccctagcgccaag
atcgtgaagaacctgtgtggcttcttgtgttgcgaccccacccttacacccagtgtcact
tcgcctatgctgcagaagcctactgaattatctccacttgaagtgacatgcgatgctcag
aatggaatcttaactctcacaaatttacagaaggccccagaacaaagccggcgagggttt
cgcagaagtgtgagtgtgaaagaagtggagaaaaaggcaggtggcagctctgtaccggac
gttgtatctctgcctgatctgtcaccgccacaggaggacccagagacccagaagcagctg
accactcagcgcctgggatcagaggcagcactgaccaccatctgcggtcactttggtaac
accttgccccagcagctacctgacctgtgggccacctgtgctcagcccctccagtcttcc
gcaccgagcacagagacagaccagcgtgcgtcagagacgcaccaggaactggtcaatgcc
ctgcagctacttgaaacagtcacccccaccctgcactctgatcttttgaatcaggttctg
gaccagatggatacactgtccggtcacctccaccatatcagcacgtctgtgcgacacatg
gcagccagagtgttcgccgtgctgagtgttcagcgcacgtcaacggtgctgactttcttc
atcgagcacattctgccgcagctgggtgccatgcatgatatcaggatgaggcagggagca
tcagaggctctgtccaacattttggaccagctaggtctgagagtggtgccttacattgtg
ctgatgatggtgccggtgctgggacgcatggcagatcacgactcctcagtgcgtctcatg
gccacacactgttttgccacactcatccgtcttatgcctttggaggctggcataccagac
cctccagagctcaagccatcgttagcagcaaggcgagaacaggagagacagttcttggag
cagcttctggactcttctaaactggaaccatacaaaatcactgttcccatcaaagctgag
cttcgcaaataccagctggatggtgtcaactggttaggtttcctgaacaaataccaactc
catggtattttgtgtgacgacatgggtctgggcaaaacgctgcagtctctctgcgtgttg
gccaccgatcatcagcgacgacagaaacttcatgaggaaacaaaaagccccgacagcgcc
ccactgtcatccattgtgatctgtccaccaacgcttgttggccattgggtttatgaagtg
aagaaatttgtggacgctgagtacctcaaccctctgatgtatgctggcccaccagcagaa
agaatcaagttacagaagaaagtcaagaagcacaacctcatcgtggcctcctatgatgtt
gttcgtaatgacatcgactttttcagtgccttgagatggaattactgcatccttgacgag
ggccatgtcattcgcaatggaaagacaaagttgtccaaggcgaccaaacaactgatcagc
atgcatcgcctcatcctgtctggcacgcccatacagaacaacgtccttgacctatggtca
ctcttcgacttcctcatgccgggatttttgggtaccgagaagcagttccaggccagatac
gggaaacccatcttgctgtcgcgagaagccaagagcacgtccaaagagcaggaagcaggt
gctcttgcgatggagaaactgcacagacaagttctgccgttcatcctgagacgtatgaag
gaagatgtgctcaatgacctgccgcccaagatcatccaggactactactgtgacctcagc
ccactgcagatacagtggcacaagtcagacctcgtgccagcccagcagttttgctacttg
gggatggcgttcgacacagtgctttacactgtgtctccctccccggacagaatcctctcc
ctgaggcgaaagatcctctccattcaggcttgccgcgctgttcctcacaggcggctggcg
gaactgttgggttccatggagtctgtcgctctgctgctgccccttgcaaggctacacaaa
cgtcccctgcaacgggcatgtatgttgcaggcactgctgtacctgaggaaggtgtgcaac
catccggccctggtcctcagcaactcccaccccaagtacagcgaggtcatgaaccgcttg
acccagcagcgcacctcactgcacgacatgctgcatgctccaaaactcaccgctctcaga
caactgttgctggactgtggcatcggggtgtcggccagcggcggggcgagtagcagtgct
gcggagtgtgccatggatactgacgtccctgtggtgggtcagcaccgagtgctgctcttc
tgtcagctcaagggcatgctggacattgtggaaaaagacctcctcaaagttcatatgccg
ggtgttacatacctgcgtctggatggcagcgtccctgcaggatctcgacatgacatagtg
cacagattcaacaatgatccgtccattgacatgctgttgctgacaacgcacgtgggaggc
ctgggactgaacctgactggtgctgacaccgtcatctttgtggagcacgactggaacccc
atgaaagacttgcaggccatggaccgtgcacacagaatagggcagaagaaagtggtgaac
gtctatcgactcatcacccgtggcactctggaagacaagatcatggggctgcagaagttc
aagatgtccatcgcaaacacggtgatcggccaggacaactccagcctgcagaccatgagc
actgaccagctgctggacctcttcactctggacgaccagggcaaagtgaccagtgtcggg
tccaatccttactccggccccacggaactgtcgggctcggggacgtccaagcgaggtggc
atgcgcgccgtgatggacagtctggaggaactgtgggacgagcagcagtatgagtctgag
tacaacctggagaacttcatgaaaacgttgacatga
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