Littorina saxatilis: 138958280
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Entry
138958280 CDS
T10665
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
lsax Littorina saxatilis
Pathway
lsax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138958280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsax03041
]
138958280
Spliceosome [BR:
lsax03041
]
Complex A
Other components
Complex A specific factors
138958280
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
KH_12
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
138958280
NCBI-ProteinID:
XP_070185490
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All DBs
Position
LG2:14523984..14542519
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AA seq
663 aa
AA seq
DB search
MFGAPQGIKRPSGFDMGEWGGNGDDSNDGTGRKKKKRSRWNTEIDDKTVIPGMPTTIPPN
LSKEQEKQYIVHLQIEEISRKLRSGDLGISPNPEDRSPSPEPIYNNEGKRLNTREYRTRK
KLEDERHQLVVEAWKLNPNYKPPADYKPPIVRVSDKVMIPQEEHPDINFVGLLIGPRGNT
LKNLEKETGAKIIIRGKGSVKEGKIGRKDGQPLPGEDEPLHAYVTANNPENVKKAVEKIK
EIIRQGIEVPEGQNDLRRQQLRELALLNGTLRENDGLAKLKQIAQAQTIVTNTILCTVCG
GAGHIAQDCKERKPGDSFRMTQVQTSTDRAKMDSEYMSLMAELGEGPPPKSTSAPTQQSH
RPQLFHNQMPPNPMAFNPPWQQQQQQHHHHHHQQQQQHSTPRPLALQAPPSMVPPMSQQN
RMPPSLPLPNPMASQGPPPMRPWQPPQLNTTTPSLLPNPSVPMGVPPPHNMQMSAPPPPP
NSQAQPNMPWSLNSLQSTMAQAGMGQPGMQQPVMQQPGMQQPGMQQPGMQQPGMQQPGMQ
QPGMQQPGMQQPGMQQPGMQQPGMQQPGVSIAMVPPPQVQTTTSAPWQQNPMGMASLPPW
QQQQQHQQSAPPPVPPPPPPQNGQQGFSHMPPPPPPTGFDMGQQMGSGNPMMVAPPPPPP
PPH
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctccgcagggtataaaacgcccgtctggatttgatatgggagaatggggt
gggaatggtgatgacagcaatgatggaactggacggaagaagaaaaagagaagtcgttgg
aacacagaaattgacgacaagactgtaattcctggcatgccaactaccattccacctaac
ctctccaaggaacaggagaagcagtatattgttcatttacaaatagaggagattagtcgt
aagctacgctctggagacctgggcatctcacctaaccctgaagacagatctccctcccca
gagccgatctacaacaacgagggcaagcggctgaacacacgtgaataccgcacgcgcaaa
aagctggaagacgaacgtcaccagttggttgtggaagcctggaagctcaaccccaactac
aaaccccctgcagactacaagcctccaattgtgcgtgtgagtgacaaggtgatgattcct
caggaggaacaccctgacatcaactttgtcggcctgctcatcggtccgcgtggcaacact
ttgaaaaatctggaaaaggagactggtgctaagatcatcattcgcggcaaaggatccgtc
aaagaaggaaagattggccgcaaggatggtcaacctctaccgggagaagacgaacctctg
catgcgtatgtgactgcaaacaacccagagaatgtgaagaaagctgtggaaaagataaag
gaaataattcgccagggcatagaggttcccgaaggtcagaatgatcttcggcgacagcag
ctgagggaactggctctactgaacggaactctgcgggaaaatgatggtttggcgaagcta
aagcaaattgcacaggcacagacgatcgtgaccaacaccattctctgcacggtgtgtggc
ggtgctgggcacatcgctcaggactgcaaagaaaggaaacctggagactcgttcagaatg
acacaggtacagacttctactgaccgtgccaagatggacagtgagtacatgtctctgatg
gctgagctgggagagggacccccgcccaagtcaacatcagcacccacccaacaatctcac
cggccacagcttttccacaaccagatgccacccaatcctatggctttcaacccaccctgg
caacaacaacagcagcagcatcaccatcatcatcatcagcagcagcaacagcactcaacg
ccccgcccgctagcactgcaagcccccccttccatggtgccccccatgtctcagcagaac
cgcatgccaccttccctccccctgcccaaccccatggcctctcagggcccacccccgatg
agaccgtggcagccaccccagctcaacactactacaccgtccctgctgcctaacccctca
gttcctatgggtgtcccacccccgcataacatgcagatgtcggcaccacccccaccgcca
aacagtcaggcccagcccaacatgccctggagcctcaactctctgcagtccactatggca
caagctggaatgggccagcctggcatgcagcagcccgttatgcaacagcccggtatgcaa
cagcctggcatgcagcagccaggtatgcaacagcccggcatgcagcagcccggcatgcaa
cagcctggcatgcagcagcctggcatgcagcagcccggcatgcagcagcccggtatgcaa
cagcccggtatgcaacaaccaggagtaagcatagccatggtgccacccccacaagtgcag
accaccaccagcgccccttggcagcaaaaccccatgggtatggcttctctgccaccgtgg
caacagcaacaacagcaccaacagtccgccccaccaccagtgccaccacccccaccacca
caaaacgggcagcagggtttcagccacatgccccctccaccccctccaactggctttgac
atggggcagcagatgggatcggggaatcctatgatggtggctccccctcctcctccccct
cccccacactga
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