KEGG   Littorina saxatilis: 138958448
Entry
138958448         CDS       T10665                                 
Name
(RefSeq) collagen alpha-2(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
lsax  Littorina saxatilis
Pathway
lsax04382  Cornified envelope formation
lsax04512  ECM-receptor interaction
lsax04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lsax00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    138958448
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    138958448
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    138958448
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lsax04147]
    138958448
   00536 Glycosaminoglycan binding proteins [BR:lsax00536]
    138958448
Exosome [BR:lsax04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   138958448
Glycosaminoglycan binding proteins [BR:lsax00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   138958448
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 138958448
NCBI-ProteinID: XP_070185704
LinkDB
Position
LG2:20501489..20554171
AA seq 1109 aa
MESRILYFLVALWVWPCLQLADAQSWPTVLYRPEGQCNRGCSCLDLRGRPGPYGPKGEVG
MMGRQGLPGVEGAPGIRGLKGESGFPGEPGERGEAGLEGRPGMTGAPGQTGSVGSRGSQG
LAGIQGMPGVPGAKGDKGTPGFNGLDGARGFRGPAGPVGPSGKDGVPGPTGPVGTLGPPG
QPGCDGLNGLKGSSGEPGFPGQHGLQGLPGIGRYGPPGPPGLPGRFELGELTANNSDYAN
LLREMKGVKGQKGDFGMPGFGFPGRKGDRGFPGSTGDVGPEGLPGFPGTPGQPGVPGTIM
EGFPGTKGDRGPRGPQGRDGLPGRPGSKGELGEGLPGRDGFPGVPGEKGMSGPPGRDGPT
VRGLPGTPGIPGRPGPEGPPGRGEKGEAGELGQKGHHGQPGYPGARGKKGRGGEKGDLGF
PGPPGPPGRVDMLTGTIQGEPGMKGPKGDPGLGTKGERGYPGQRGDPGFSGSDGLPGRPG
LDGLPGARGEPGDSVQGIKGARGVPGVPGLPGESGFRGIPGDPGLEGVPGLPGVKGIPGE
RGLPGRVGPFGEKGERGSEGFPGLPGVDGPAGIPGRPGPSGPKGDSGTSVSGVKGDRGEP
GEGFPGPAGLSGLPGDPGNRGEPGFPGEPGREGPQGLQGEFSIGLPGLKGESGASGLDGI
PGSPGVRGPFGPKGDPGEHGARGTPGARGQDGIPGEPGAPGRDGIPGEPGRQGLPGQNGA
EGESGLPGLPGDTGRQGEPGFGVPGEKGSKGDSGDALFGSKGEPGDLGPRGDPGLPGLPG
ESGLPGLKGDRGEAGFGMPGPQGEKGMDGMGIRGDPGAPGLPGLPGKYGQPGEKGELGPS
GPSGIGLKGERGEPGLGYPGPQGPKGRPGQGLPGIAGNPGLPGPSAYLYVRHSQTTGVPQ
CPLGHVRLWSGYSFLHSEDEGRAFSQDLGQSGSCLEKFNPMPLLFCSINDVCNYASRTMT
SYWLATTEAVPMMPVRGNSILRFISRCSVCTASGPILTMHAQSTVPPQCPQGWGEMWTGY
SFLMHAVGAMSGGQPLNSPGSCIELFYTNPFIECTGRGQCHFFADKFSYWLTAQRELEEV
DPQQQTLKSGTYRNKISRCRVCVLTTPLS
NT seq 3330 nt   +upstreamnt  +downstreamnt
atggagtctcggattctgtattttttggtggcgttgtgggtgtggccttgtcttcaactc
gcagatgctcagtcgtggcccacagttctctacagacctgaggggcagtgcaacaggggg
tgctcctgtctcgacctcagaggacgtccgggtccgtatggcccaaagggcgaggttggt
atgatgggaagacagggcctacccggggtggaaggagcgccgggtattcgcggcctgaaa
ggggaatctggcttcccgggggaaccgggagagaggggagaagccggtcttgagggacga
ccaggaatgacaggggctcctggacaaaccggttctgtcggttcacgaggctcccaaggg
ctcgcaggtatacaaggtatgccaggggtccccggagctaagggcgataaagggactcca
ggtttcaacggactggacggtgccagagggttcaggggtccggcgggtccagttggtcct
tctggcaaagacggagttcctggaccaacgggccccgttggaacactaggaccaccagga
cagcccggatgtgatggtttgaatggtctgaaagggagctctggagagcccggatttccg
ggacaacatggccttcaaggtttaccaggcatcggccgatacgggcccccaggacctccg
gggctaccagggcgttttgagctgggagaattgaccgccaacaacagcgactacgccaac
ttactgcgggaaatgaaaggagttaagggtcagaagggtgacttcggcatgcctggcttt
ggtttcccgggcagaaaaggtgacagaggcttccccggcagtacgggcgatgtaggacct
gaggggttgcctgggttcccaggaacgcccgggcagcctggtgtcccgggcacaataatg
gaagggttcccgggcaccaagggtgacagagggcccaggggtccacagggccgagacggg
ctcccgggtagaccagggtccaagggggagcttggagagggtcttccaggccgagacggc
tttccaggtgttccaggcgagaaagggatgagcggtccaccagggcgggatggaccgacg
gtacggggccttcccgggactccagggattccagggagaccgggtcccgagggaccgcca
gggaggggggagaagggggaggctggggagttggggcagaaggggcaccacggccagccc
ggctaccctggagcgcggggcaaaaagggcaggggcggcgagaaaggagatttgggattc
cctggtccacccggtccaccaggccgggtagacatgctgacgggtaccattcaaggcgag
ccaggaatgaaagggccgaagggggatcctggtcttgggaccaagggtgagcgaggctac
ccgggccaaagaggagacccaggtttctcgggtagtgacggtttacccggacgacccgga
ctggacggtctacctggcgcacggggagagcccggtgacagtgttcagggcatcaaaggg
gcgcgcggtgtcccaggggtgcctggtctaccaggagaatccgggttccgcgggattcca
ggagacccagggctcgaaggagttcccgggcttccgggtgtcaagggcattccaggtgaa
cggggtcttccaggccgggttggcccattcggggagaaaggagagaggggttccgagggg
ttccctgggctgccaggggtggacgggcctgctggaattccggggaggccaggaccctcc
ggtcctaaaggggactctgggacttctgtgtccggtgtcaagggggacagaggagagccg
ggggaaggcttccccggtccagctggcttatctggtctacctggagatccgggcaataga
ggggaaccaggtttcccaggggagcctggcagggagggaccacaaggcttacagggagaa
ttttccatcggtctccctggtctgaaaggtgagtctggagcctcaggtctagacggcatt
ccaggtagcccaggtgtgcgaggtcccttcggtcctaagggggacccaggtgagcacggc
gcgaggggcacgccaggtgccagaggccaggacggtatccctggagaaccaggtgcacct
ggacgtgacggcatacctggggaacctggtaggcaaggcttacctggacaaaacggagcg
gaaggtgaatcaggattaccaggtcttcccggtgacacaggccgtcagggcgaaccaggt
tttggcgtgcctggagagaagggctccaagggagattcgggagacgcactgttcggcagc
aagggagagccgggagacttagggccgcggggagatccagggttgcctggcctcccaggg
gaatccgggctgcctggcttgaagggagatcggggagaggctgggttcggaatgcctgga
ccccaaggagagaaaggcatggatggaatgggtatacgcggagatccaggtgctccaggt
ctcccaggtctacccggcaaatatggccaacccggagagaagggtgagcttggacccagc
ggtccatccggaataggtctgaagggagagagaggagaacccgggttaggctacccggga
cctcagggacccaaaggcaggccgggtcaaggattaccgggtatcgcgggcaatccaggc
ttacctggcccctccgcgtacctgtatgtacgccacagccagacgacaggtgtgccacag
tgcccgctgggtcacgtcaggctgtggtctggctacagcttcctccactctgaggacgag
ggccgagccttcagtcaagatctgggtcagtccgggtcgtgcctggagaagttcaacccc
atgccgctgctcttctgcagcatcaacgacgtgtgcaactacgccagcagaacgatgacg
tcctactggctggccaccacggaggccgtgcccatgatgcccgtgagaggcaactccatc
ctccggttcatctcgcgctgctccgtctgcaccgcctccggacccatcctcaccatgcac
gcgcagagtactgttccccctcagtgtccccagggctggggcgagatgtggactggctat
agttttcttatgcatgcagtgggggcgatgagcggaggccagccccttaactcgccaggt
agctgtatagagctcttctacaccaaccccttcatcgagtgcacggggcggggccagtgt
cacttcttcgcagacaagttcagctattggctgacggcgcagcgcgagctggaagaggtg
gaccctcagcaacagaccctcaaatcgggcacctataggaacaagattagcaggtgtaga
gtgtgtgtgttgaccactcctctgtcttga

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