Littorina saxatilis: 138958616
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Entry
138958616 CDS
T10665
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lsax Littorina saxatilis
Pathway
lsax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138958616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138958616
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138958616
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
138958616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF402
Motif
Other DBs
NCBI-GeneID:
138958616
NCBI-ProteinID:
XP_070185924
LinkDB
All DBs
Position
LG2:26518990..26558089
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AA seq
713 aa
AA seq
DB search
MADKRRLQGEIDRCLKKVAEGVEIFEDIWKKVCLVSSATNSNQKEKYETDLKKEIKKLQR
LRDQIKTWVANSDIKDKQPLIDHRKLIETQMERFKVLERETKTKAYSKDGLGAAAKLDPQ
TKEKSETTAWLSTQIESLKIQLDTLECELESMEITTKKKKMDKDSGPRVEELKTKRDRHK
FHIKHLEMAMRAVDNDALGVEQIKGIKDDVEYYVDFNQEAGFEENEFIYEDLDLEDIGES
GGQGVGGLEGEELEKVDTPTSTNSSSPSPSPSLNANHSMEKPEEKERKRHKSQSEEAYEK
NHTSAPLISKPQNPPSRQSSQSNSTVSQNSESNSINSNHHPSSTVTPPLTAYAAAASSQQ
HNTADSKPLVNSIDHASNSINSNSVQVSSVSNSVSLTSSGNPSVPSAPSPHMNSVGSAGT
MGSSSVTTGINSIQNSSSRPDMPIVMNGPNSAGSHFILNKNQDSLSSLQSIAQQAVTSAG
LDDRVTSPVQRTDSSSVFSSSSQAPPQPTAPSPDSQSVAASVLTSQTLNVSQVSGSLSSS
QQNAAPQTSSIQLNPLLGVAPLGPMQLTKENLFQLTMSEAAFHHLPHPSDSERLRHYLPR
NPCPTPVYYQQVPPTQADSLDFFSKLSTETLFFIFYYMEGTKAQYLAAKALKKQSWRFHT
KYMMWFQRHEEPKSITEDFEMGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLN
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaggctacaaggtgagatagaccgatgccttaaaaaggtcgctgaa
ggggtggagatatttgaagacatctggaaaaaggtttgtttggtctcgagtgctacaaac
agcaaccagaaagaaaagtatgaaacggatctgaagaaggaaatcaagaaacttcagagg
ttgcgagaccaaataaaaacatgggttgccaacagcgacatcaaagacaagcaacctttg
atagaccatcggaagttgatagaaacgcaaatggagaggttcaaagtgttggagcgagag
acaaagaccaaagcttactccaaagatggtcttggcgctgctgccaaactggacccccag
acgaaagaaaagtcagagacaactgcgtggctatcaacacagatcgagtcattgaagatc
cagcttgacacgttggagtgcgagttagagtccatggaaatcactacaaaaaagaagaaa
atggacaaggattcgggtccccgagttgaagagctgaaaaccaagagagaccgccacaag
tttcacataaaacacttagagatggcaatgagggctgtggacaatgacgccttgggagta
gaacaaatcaaaggcattaaagatgatgtggagtattacgtggatttcaatcaggaggca
ggttttgaagagaatgaatttatctatgaagatctggatcttgaagacatcggtgagtcg
ggaggccaaggggtagggggactcgagggcgaggaactggaaaaggttgacacgcctacc
tccactaactccagttctccctctcccagtccaagcctgaatgccaaccattccatggag
aaacctgaagaaaaggagaggaaaaggcacaaatcccagtcagaggaggcatatgaaaag
aatcatacatcagcaccacttatatccaaaccccagaatccaccttctagacagtcatca
caaagcaattcgacagtatctcaaaattctgaaagcaacagcatcaacagcaaccatcat
ccgtcgtcaacagtaacacccccattgacggcgtatgctgcggcagctagcagtcagcaa
cacaatacagcagattccaagcctttggttaactccattgaccatgcatccaacagtata
aacagtaacagtgtgcaagtgtcgagtgtcagcaactctgtctctctcacctcctcggga
aatccctccgtgccctcggcgccctcaccccacatgaactcggtggggtcggcaggcacc
atgggctccagctccgtcacaacagggatcaactccattcagaacagcagcagtcgccct
gacatgcccatcgttatgaatggaccgaacagtgcaggcagccatttcatcctcaacaag
aatcaagattccttgtcatcattgcaatcaatagcacaacaagctgtgaccagtgcaggc
ttggatgatcgagtgacaagtccggtacaaaggacagattcttctagtgtgttcagttct
tcttcacaagctcctccacagcccaccgctccatcaccggacagccaatcagtggcagcg
tcagtgttaacctcacagactctgaatgtgtcgcaggtgagcggcagtttgagctctagt
cagcagaacgccgccccccaaacgtccagcatccagttgaaccctctgctgggtgttgcc
cctttggggccaatgcagcttacgaaagagaacctgtttcagctgaccatgagtgaagca
gcatttcatcacttgcctcacccatcagattcagaaagattaaggcactacttaccacgg
aatccctgtccaacacctgtctactaccagcaagttccaccgacacaagcagactctctt
gacttcttctccaagttgtccacagaaacccttttcttcatcttctactacatggaggga
accaaggctcaatatttggcagcaaaggctttgaaaaagcagtcctggaggttccacacc
aaatacatgatgtggtttcagcgccatgaagaaccaaaatcaataacagaagattttgaa
atgggtacatacatctactttgactacgagaagtggggccaacggaagaaggagggtttt
accttcgaataccgatatttggaagatcgggatttgaattga
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