Littorina saxatilis: 138958914
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Entry
138958914 CDS
T10665
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2-like isoform X1
KO
K17908
autophagy-related protein 18
Organism
lsax Littorina saxatilis
Pathway
lsax04136
Autophagy - other
lsax04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138958914
04136 Autophagy - other
138958914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsax04131
]
138958914
03029 Mitochondrial biogenesis [BR:
lsax03029
]
138958914
Membrane trafficking [BR:
lsax04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
138958914
Mitochondrial biogenesis [BR:
lsax03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
138958914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
ANAPC4_WD40
WD40_MABP1-WDR62_1st
DUF7165
Motif
Other DBs
NCBI-GeneID:
138958914
NCBI-ProteinID:
XP_070186350
LinkDB
All DBs
Position
LG2:complement(37375364..37409758)
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AA seq
488 aa
AA seq
DB search
MSMVVNSGEQQTNLLFANFNQDNTSLAAGSKSGYRLFSLSSVEKLEPIYENAQEEAYIVE
RLFASSLVAIVNQQHPRKLKVCHFKKGTEICNYSYSGSILGCKLNRQRLVVCLEESLYIH
NIRDMKVLHTIRDTPTNPTGLIALSISNENCYLAFPGSNQMGEVQIFDTINLRGVLMIPA
HDNRLAALAFSPAGDKLGTASEKGTVIRVFGLPDGAKLFEFRRGVKRCVSITCLSFNHDA
TFLCSSSNTETVHVFKLEQPKEKQADESGSWMGMMGNLVKSSASVLPAQMTDMFSQGRSF
ATAHLPCPGTKNICAITTIQKLPRLLVVNLEGLMYIYNLDPNESGECQLVRQHRLDGASP
EGSPGDQASVDRPLTHPSTGVSPAAASAFPAAARRSEGGAQAAGSSGKPAATVWSPGESY
AEVLRRKGGPQEMEPSELMDTLLNSPESQPYQDLEQGAMGGEAGDGHGIAGLRLDDDAEF
PPMTHKND
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggttgtaaactctggtgagcaacagacgaacctgttgtttgccaactttaac
caggataacacgtcccttgcagctggaagtaaatcaggctaccgtcttttttcattgagt
tcggtggaaaagcttgagcccatctacgaaaatgcccaggaagaagcctacatcgtggag
cgattgtttgccagtagcctggtggcaattgtcaatcagcagcatccccggaaactcaag
gtgtgccactttaaaaagggcacagagatttgcaactacagctactctggatcgatctta
ggctgcaagcttaaccgccagcgtttggttgtttgcttagaagaaagcctgtacattcac
aacatccgagacatgaaggtgctccacacgattcgtgacacacccaccaaccccacggga
ctcattgcactatccatatctaatgagaactgctatcttgccttcccaggaagcaaccaa
atgggagaggttcagatttttgacaccataaatttgcgaggtgttctaatgataccagcc
catgacaatcgtctggctgccttggcttttagtccagcaggagacaaacttggcacagca
tcagaaaagggaactgttataagggtatttggactcccagatggggccaagctgtttgaa
ttcaggaggggagtcaaaaggtgtgtcagcatcacctgcctttcattcaaccatgacgcc
acattcctctgctcttccagtaacacagaaaccgttcatgtcttcaaactggaacaaccc
aaagaaaaacaagctgatgagtcaggatcgtggatgggaatgatgggaaatctagtcaaa
tcgtcagcgtccgttttgccggcccagatgacggacatgttttcccaaggtcgatcattc
gcaacagctcacctgccctgccctggcaccaaaaacatttgcgccattaccaccatccag
aagttgccacgcctgttggtcgtcaacctggagggtcttatgtacatctacaaccttgac
cctaatgagtcgggcgagtgtcagcttgtacggcaacacaggctggatggcgcatcgcca
gagggtagcccgggtgatcaggcgtctgttgatcgtcctctgacacaccctagcactggg
gtttcacctgcggccgctagtgcattcccagctgccgcccggcgctctgaggggggagct
caggccgcaggaagctcaggtaagccggcagccacagtttggtcgccgggggagagttac
gcggaggtgttgagacgaaaaggtgggccccaggagatggagccttccgaactcatggat
acgctcctcaactcgccagaatcgcagccttaccaggacttggagcaaggtgccatgggg
ggagaggctggtgacggccatggcattgcaggcctaaggctcgatgacgacgccgagttt
ccaccaatgacgcacaaaaacgattaa
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