Littorina saxatilis: 138959188
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Entry
138959188 CDS
T10665
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsax03041
]
138959188
03016 Transfer RNA biogenesis [BR:
lsax03016
]
138959188
Enzymes [BR:
lsax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138959188
Spliceosome [BR:
lsax03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138959188
Transfer RNA biogenesis [BR:
lsax03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
138959188
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
Motif
Other DBs
NCBI-GeneID:
138959188
NCBI-ProteinID:
XP_070186688
LinkDB
All DBs
Position
LG1:complement(1166897..1756538)
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AA seq
732 aa
AA seq
DB search
MTAFEEMGVMPEIGKAVEEMEWNLPTDVQSEAIPMILGGGDVLMAAETGSGKTGAFCLPI
LQIVYETIMDQREGKGGRKSALSQGSHKWKMNSYDRGEALAIDPEGTLCQARDSASWHGT
RSNKAVVGAGKWYYEGTVTDEGLCRLGWSTGQARLDLGTCKFGFGFGGTGKKSWGKQFDS
YGEPFGMNDTIGCHLDLDNGEIRWSKNGVDLGKAYDLPPHQRSEPFYAAVVLKNAEMLFN
FGDTPFKFPPQNGFVGLSSATGKNVIESKIVAGGAVSAKPAPNAPQAIIIEPSRELAEQT
IVQLQKFKKHLSDPAIRDLLIIGGVPAREQVEKLEKGVDIVCGTPGRLEDLISTGKLVLH
QVRFFVLDECDGLLSQGYGDLINRLHQQIPKVTADGKRLQMVVCSATLHSFDVKKMAERL
MYFPTWIDLKGADAVPETVHHCVCMVDPRADTEWKTLQRHVTTDGVHQKDSTGPDTATPE
TYSEAVKVLKGEYVVRAIERHNMDRALIFCRTKLDCDNLEKYMNEVGKGKLTCVCLHSDR
NPGERKGNLQKFKDAKVRFMICTDVAARGIDVRGLPFVINVTLPDEKQNYIHRIGRVGRA
ERMGLAISIVSTVKEKVWYHSNCNSRGRGCYNTRLTDAGGCCIWYDEPKFLSQLEHVLIA
SYDRREPDVRGPIPNEFCGQVAFGKQKTGTGSGYKGHVEFLAPTVSELALLEKSAQTSFI
DLKFKKKFTKRA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatttgaagagatgggtgtgatgcctgaaattggcaaagctgtggaggagatg
gaatggaacttgcctacggatgttcagtctgaagccattccaatgattcttggcggtgga
gatgttttgatggctgctgagaccggaagcggcaaaacaggagccttctgcctgcccatc
ctgcagattgtgtatgagactattatggaccaacgggaaggcaagggagggagaaagtcg
gctctgtcgcagggaagtcataagtggaaaatgaattcctacgaccgtggtgaagctttg
gccattgaccctgagggcacgctgtgtcaggcccgtgactctgcaagctggcatggaact
cgctccaacaaggccgtagtcggtgcaggcaagtggtactacgagggcacagtgacggac
gagggtctgtgtcgactgggctggtcaacgggtcaagccaggctggatttgggaacttgc
aagtttggctttggctttggcggcactggcaaaaagtcttgggggaagcagtttgacagc
tatggagagccctttggcatgaatgacaccataggttgtcacctggatctggacaatgga
gagattcgctggtccaagaatggtgttgatctgggaaaggcctatgatcttccaccacac
cagcgctcggagcctttctatgctgcggtagtgttgaagaatgcggaaatgctgttcaac
tttggggacacccccttcaagtttccccctcagaatggctttgtgggattgtccagtgct
acaggaaagaatgtcatcgaatccaaaattgtcgcgggaggtgcagtcagtgccaagcct
gcaccaaacgctccacaagccatcatcattgagccgtcccgggagctggcggagcagacc
attgtgcagctgcagaagttcaagaaacacctgtcggaccctgctatccgagacctgctc
atcatcggcggcgtgccggcccgtgaacaggtggagaagttggagaaaggggtggacatc
gtgtgcggtacccccggccgtttggaggatctcatctccaccgggaagctggttctgcac
caagtgcgcttctttgtcctcgatgaatgtgatggcctgctgtcccagggttacggtgac
ctgatcaaccgcctccaccagcagattcccaaggtcacggctgatggcaagcggctccag
atggtcgtctgttcagccacactccactcctttgacgtcaagaaaatggccgagcgcctg
atgtacttccccacgtggatcgacctgaagggagcagacgccgtccccgagaccgtgcac
cactgtgtgtgcatggtggaccccagggcggacacggagtggaagacactgcaacgtcac
gtgaccacggacggcgtgcaccagaaggacagcaccggacccgacaccgccacgccagag
acgtactcggaggcagtgaaggtgctgaagggagagtacgtggtccgggccatcgagcgc
cacaacatggaccgggccctcatcttctgcaggaccaagctcgactgtgacaacctcgag
aaatacatgaatgaagtgggcaaaggaaagctgacctgtgtgtgtctgcacagtgatcgc
aacccgggcgagaggaagggcaacctgcagaagttcaaggatgccaaggtacgcttcatg
atctgtacggacgtggctgcccgcggtatcgacgtgagaggattacctttcgtgatcaat
gtgacgctgccggacgagaagcagaactacatccatcgtatcgggcgggtagggcgagct
gagcgaatggggcttgccatcagcatcgtttctaccgtcaaagagaaggtgtggtaccat
agcaactgcaacagccgcgggcgtggctgctacaacaccagactgaccgacgcgggaggt
tgctgcatttggtacgatgaacccaagtttctctcgcaactcgaacacgtactgatagca
tcttacgatcgccgagagccagacgtccgcgggcccatccctaatgagttttgtggtcaa
gttgcttttggcaagcagaaaacaggcaccgggtcggggtacaaaggtcacgtggagttc
ctggcgcccacagtgtcggagctggccctgctggagaagtcggcgcagacctccttcatc
gacctcaagttcaagaagaagttcaccaagcgtgcttaa
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