Littorina saxatilis: 138959217
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Entry
138959217 CDS
T10665
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
lsax Littorina saxatilis
Pathway
lsax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138959217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsax03041
]
138959217
Spliceosome [BR:
lsax03041
]
Complex B
Other components
Prp19-related factors
138959217
Complex C
138959217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
RRM_YTH1
RRM_occluded
zf-CCCH_2
zf-CCCH
Nup35_RRM_2
zf-CCCH_4
RRM_3
zf-CCCH_10
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
138959217
NCBI-ProteinID:
XP_070186712
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Position
LG2:52778825..52787614
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AA seq
437 aa
AA seq
DB search
MATSKGANTYNRQNWEDSEFPILCQTCLGDNPYIRMTKEKYGKECKTCARPFTVFRWCPG
ARMRFKKTEVCQTCSKLRNVCQTCLLDLEYGLPVQVRDQALKLQESMPKSDVNKEYYTQN
MEREIANSDGISPVGALAGKAQAPSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEEC
PYRHEKPTDPDDPLADQNIKDRFYGINDPVAEKLLGRYNSMPKLETPEDKSVTTLYVGNL
GDKVGEKELRDHFYQFGEIRSVNVVSKQQCAFVQFTIRASAEAASEKSFNKLIINGRRLN
IKWGRSQGQQLAPRPQTSESDVPLEPVPGLPGALPMPPEELSNNYFNLGGGPPPNMPPMP
PRGMPPRGPPPMGPPPPFGMPPRGPPPPGMRLPPPPPGVMPMRPPPGMPPRHGGPGMMHY
PSQDPTRMGAVPGGSKN
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttccaaaggtgcaaatacgtacaaccgacaaaactgggaagattcggagttt
cccattctttgtcagacatgcctgggggacaatccttacatcaggatgacaaaggagaag
tacggcaaggagtgcaaaacatgtgctcgtcctttcactgtcttccgctggtgcccaggt
gcccgcatgcgattcaagaagacagaagtgtgtcagacttgcagcaaactcagaaacgtt
tgtcaaacttgtctgctagatctggaatatggcttaccggtgcaagtgagagaccaagct
ctcaagcttcaagaaagcatgcctaaatctgacgtcaacaaagagtactacacacagaat
atggaaagagagatagctaacagtgacgggatttcaccagttggtgctttggctggtaaa
gcccaggccccaagtgacatgctgttgaagctagcccgcaccactccctactacaaacgc
aatcgccctcacatctgttccttctgggtcaaaggagagtgcaagcgtggagaagagtgt
ccgtacagacacgaaaagcccaccgaccctgacgaccctctggctgaccagaacatcaag
gaccgattctacgggatcaacgaccctgtggcagagaaactgctgggtcgctacaactcc
atgcccaagcttgagacacctgaagacaagagtgtcaccacgctctatgtgggaaacctg
ggggacaaggttggagagaaggaactcagggaccacttttaccagtttggcgaaattcgc
tcagtgaatgtggtgagcaagcagcagtgtgcattcgttcagttcaccatccgggcctca
gcagaggcggcgtcagagaagtcgttcaacaagctgattatcaacgggcgtcgcctgaac
atcaagtggggacgctcacagggacagcagttggcgcctcgcccccagacttcagagagt
gacgtgcctctggaacctgtgcctggtctacctggtgctctgcccatgccaccagaggag
ttgtccaacaattactttaacctgggtggaggccctccacccaacatgcctccaatgcct
cctagaggcatgcccccacgtggacctcctcccatgggcccacctccaccctttgggatg
ccacccaggggccctcccccaccaggaatgcgactgcctccccctccgccaggcgtgatg
cccatgcgtccacccccaggtatgccccctcgtcacggcggtccaggcatgatgcactac
ccctcgcaggaccccacacgcatgggggctgtaccaggggggtccaaaaactga
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