Littorina saxatilis: 138959235
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Entry
138959235 CDS
T10665
Name
(RefSeq) RAD50-interacting protein 1-like
KO
K20474
RAD50-interacting protein 1
Organism
lsax Littorina saxatilis
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsax04131
]
138959235
Membrane trafficking [BR:
lsax04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
138959235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
COG6_N
TcpS
VAPB_antitox
Motif
Other DBs
NCBI-GeneID:
138959235
NCBI-ProteinID:
XP_070186734
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All DBs
Position
LG2:52816154..52837698
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AA seq
788 aa
AA seq
DB search
MAASMGDPALSPNEFMVSFMNSHFDDNVRSLSKLQDIYKDVKDQKSSIETRLLKVSEEVP
SEIKKAISAGQSASDRIHRLCEQQESLRHSVLDHVREVKPMVEELGKITLQLQELEKHSK
YLAFVARVEELSSDMQSCLLTESLQPALESFHSLTALYGQLQDSQCKHLLSFMTETILFW
NQILRDRVADEFEDVLKAMRWPMVVATAKALPVTNTTELKNRLGRLFKRLLHLQLPDSIS
LESQPNHPLLCSIPGMRPLLLPLQLMVKPLKKRFKYHFYGKRQTNSVQKPEWYLTQVLSW
TRDHWDFLDRNIQPLLDEAGRRDVCAKTEFMRGMVMLVMEKLAHDLPELMYNDVIFSHTI
DEVLLFDRELHSTHGYPPTLPGCLDLLTTPEALSKWLAVEKKFAVEKVEGMLESPTAWES
QYKDIADVDEVQVPECAESFMTLLYTITDRYKPLPDPVAKVQFLGLQLELLEDFRIRLVQ
VMKEATHVPTGHAYTAVLNAIHYIVQVLREWNELVFFLQIQYYRTNHPRLMQESDMKSSN
SSDTSSPQKPHNISHNISQSSDGLSPEILEDLPALDTTVFEDIIDLFDSIMNDMLKNIVN
YVFTDVQARSQPYRKDKWLALPSQKEMAPTLGLSPSACEMLLVLKDHLALVAERLSQALF
TKFWKRLATRLNTFLLNELILTNHFSEGGAAQLQFDMTRNLFPLFGEYSQKPEAYFREVK
EACTLLTLKTGSAILLKEALYSALHEPSKDPNIKDTDPKAALHDIGIFVLTPEQAETMLS
LRANLSVT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttccatgggggatcctgctctttctccaaatgaattcatggtttctttcatg
aattcacactttgacgacaatgtgcgatcactatcgaagctgcaagacatatacaaagat
gttaaggaccagaaatcatccattgagacacggctgttgaaagtgagtgaagaagtgccg
tcagagatcaagaaagccatatccgcggggcagtctgccagtgacaggatccatcggcta
tgcgagcagcaggagagcttgcgtcactctgtgctggaccatgtgcgagaggtgaagccc
atggtcgaagagctgggcaaaatcacactgcaactgcaagagcttgagaaacactccaag
tatctggcctttgtggctagggtggaggaactcagttctgatatgcagagctgcctgctg
acagagtctctgcagccagcgctggagagcttccactccctgacagcgctgtatggacag
cttcaggactcccagtgcaaacaccttctctccttcatgacagaaaccatactcttttgg
aatcagattctacgagacagagtggcagatgagtttgaggatgtactgaaagccatgcgg
tggccgatggtggtagcaacagcgaaagctctaccagtcaccaacacaacagagctgaag
aatcgtctgggcagactgttcaagaggctgctgcatctccagttacctgactccatctct
ctggagagtcagcctaaccatcccttgctatgcagcattccaggcatgcggcccctcctg
ctgcctcttcaactcatggtcaaaccgttaaagaaacgtttcaagtatcacttctatggc
aagaggcaaacaaactctgtgcaaaagccagaatggtatctaacacaagtactgagctgg
acacgtgaccactgggactttttagaccgaaacattcaacctcttctggacgaggcaggc
cgcagggatgtctgtgcaaagacggaattcatgcgtggcatggtgatgctggtgatggag
aaactggcgcatgacctgccagagctgatgtacaacgacgttatcttttcacataccatc
gacgaggtgctgctgtttgacagagagctgcactccacgcatggctacccacccacgctg
cccggctgtctggatctgctgacaacgccggaagccctcagcaagtggctagctgtggaa
aagaaatttgcagtggagaaagtggaaggaatgttggagtcacccacagcctgggagtcg
cagtacaaagacatcgctgatgtggatgaagtgcaggtaccagagtgtgccgagagcttc
atgactctcctctacaccatcacagatcgatacaagccactgccagacccggtggccaag
gtgcagtttctgggtctgcaactggagctgctggaagacttccgcatccgtctggttcag
gtgatgaaggaggctacccatgtgcccacaggtcacgcctacactgctgtcctcaacgcc
atacactacatcgtgcaggtgctgcgggagtggaatgaactagtgtttttccttcagatt
cagtactaccgcaccaaccaccctcgcttgatgcaggagagtgatatgaagtcgagtaat
agttctgacaccagcagcccacagaagccacacaacatttctcacaacattagtcagtct
tctgatgggctgagtccagaaatactagaagatctgccagcccttgacacaacagtgttt
gaagacatcattgacctgtttgacagcatcatgaatgacatgctgaaaaacattgtgaac
tatgtgttcactgatgtacaggcacgtagccagccctatcgcaaagacaaatggctggca
ctaccatcccagaaagagatggcaccaactcttggcctttcaccatcagcctgtgaaatg
ctgctggtgctgaaagaccatctggcgctggtggctgagcggttgagtcaagctcttttc
accaagttctggaagcgtctggctactcgactgaacacattcctactgaacgagctgatt
ctgacgaaccattttagtgagggtggtgcagcccagttgcagtttgacatgacacgcaat
ctgtttcctctgtttggggaatacagccagaaacctgaggcttatttcagagaagtaaaa
gaggcatgtactctgctgacgctgaagacaggatcagccattctgctgaaggaagcactg
tactcggcactgcacgaacccagcaaagaccccaacatcaaagacacagaccccaaggct
gccttgcatgacattggtatctttgtcctcacccctgagcaagcagaaaccatgcttagt
ctgagagcaaatttgtcagtcacgtga
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