Littorina saxatilis: 138959246
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Entry
138959246 CDS
T10665
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
lsax Littorina saxatilis
Pathway
lsax03013
Nucleocytoplasmic transport
lsax03015
mRNA surveillance pathway
lsax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138959246
09122 Translation
03013 Nucleocytoplasmic transport
138959246
03015 mRNA surveillance pathway
138959246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138959246
03041 Spliceosome [BR:
lsax03041
]
138959246
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138959246
TREX complex
138959246
Spliceosome [BR:
lsax03041
]
Complex C
Other components
EJC/TREX
138959246
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
138959246
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
YHR127W_C
Motif
Other DBs
NCBI-GeneID:
138959246
NCBI-ProteinID:
XP_070186751
LinkDB
All DBs
Position
LG2:complement(52593293..52611253)
Genome browser
AA seq
283 aa
AA seq
DB search
MGDKLDLSLDDIIKQTKKGRGGRGGRGGRGGSGGNRGSSRGGGGGRGAGQSQRRGGGGGG
VFRGGVNPRGRRPAPYQRPKELPDVWQHDMYDGSGGGFRRGGVSIASRTGPQSTSGKLLV
SNLDFGVNDSDIQELFAEFGQLTKAAVHYDRSGRSLGTAEVIYARRTDAVKAMKQYNNVP
LDGRAMSIQLVGADGVQSRLPSGGGGGGGGGGGGGRGYSQQGGGRGRSSGGGGGGFSRGR
GGSRGGGRGRGRGRGGRAESKATPTLEELNAQLDAYNSKMDVD
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaaacttgatttaagtctggacgacattataaaacaaaccaagaaaggtcga
ggaggcagaggtggacgaggaggacgtggaggaagtggaggaaatcgcggctcgagtcgt
ggcggtggcggtggcagaggagccggccagagtcagagacgcggtggtggtggcggcggc
gtgtttagaggcggtgtgaatccgcgaggaagacggccagctccgtatcaaaggccaaag
gagctcccagatgtgtggcaacatgacatgtatgatggcagtggtgggggtttccgcaga
gggggtgtatctatagcatcacgcacaggtccacaatccacttctggcaaattgctggtc
tccaacctggactttggtgttaatgactccgatatacaggaattgtttgcagaatttggc
cagctgacaaaagcagcagttcactatgacagatcagggcgatctcttggcactgctgaa
gttatttacgcaagaagaacagatgcagtcaaggcaatgaaacagtacaacaatgttcct
ttagatggacgtgcaatgagcatacagctggttggagcagatggcgttcagagcagactg
ccaagtggtggtggtggtggaggaggaggtggtggcggcggcggaagagggtacagtcag
caaggtggaggacgcggccgtagttccggtggcggcggtggtggtttttcaaggggtcgt
ggcggttctagaggaggaggcaggggccggggtcgtggcaggggtggtcgagcagagagc
aaggctacacccacgttagaagaactgaacgcacagctggatgcttacaacagcaagatg
gatgtcgactaa
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integrated database retrieval system