Littorina saxatilis: 138959939
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Entry
138959939 CDS
T10665
Name
(RefSeq) DNA repair and recombination protein RAD54B-like isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
lsax Littorina saxatilis
Pathway
lsax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138959939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsax03400
]
138959939
DNA repair and recombination proteins [BR:
lsax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
138959939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ZGRF1-like_N
HDA2-3
Nodulin_C
Motif
Other DBs
NCBI-GeneID:
138959939
NCBI-ProteinID:
XP_070187720
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All DBs
Position
LG2:complement(83690442..83748308)
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AA seq
1083 aa
AA seq
DB search
MRRSAAPSQQHSAKRAKFMVPYKPAEPPVAHLSQAGKISLSAASEFETDREASRGMTVSG
STCDTDTDRVNTVSSPKATQKIQQIFSPPSFLSRKTDSISGSGTGQYHTSQHRRSLPASG
TANRNETRRDTPGVDNVKSDDNCCESESDSKHVAADDDRAAETITHQTHSSVLETSPQNP
AHKSVENAIESDSVEAGDNDARLPLKPFNAARKFQSPLMSRSWQVKESGQTADHKRNHDG
GTGKVAYSAASNHSIAVKVVSGNSGAVDGTECAVKCSYFSVVWCKLSKKKHKKWEGDAVL
VTQGRRVTLYDMDGKEIGKGSGYKSAELESLAEDETLVVGGKEIQVMSKLSEEQFKSGKC
FAGAGSVKDDNVPTPHKPTAGQFKSFTNPVLAQKGDTNMESAVSRVQNVAPKFDPSAPDA
LVMPRPTAAHQWQNNKQQTPVVDVVVDPHLCYHLRPHQCEGVTFLYECVTGLRNYGGAGA
ILADDMGLGKTLQCIALVWTLLKQGMYGGKPPVKRVLVVTPGSLVKNWAAEFRKWLGTER
LQVFVAAGDSRVEDYVKTAVYPVLIISYEMFVRGYEVVKSVPFDLVVCDEGHRLKNAAIK
TNSLISSLDTRRRVVLSGTPIQNDLQEFFAVVDFCNPGVLGSSAAFRRVYEDPILQSRQP
GATKDIVDLGEERAAELSRLTRMFVLRRTQEVNNKYLPPKVELVLFCQPSALQINIYHEI
LRTSVVRSCLMGRGSGAGKGAGAPHLLAIAALKQLCNHPKLIAPKVFKASEALTEDGDAV
DISDGDSLFTGLADKYHTELSAAGVSCGDSGKLAALNVILANVFGHCPQEKVVLVSNHTK
TLDLLQQFCSDCGYSCVRLDGHTPTAQRQQIVTRFNSSYGQEKIFLLSSKAGGVGLNLIG
ASRLILYDIDWNPANDLQAMARVWRDGQKRQVYIYRLLTTGSLEEKVYQRQISKQGLSGA
VMDLKASDFQFSQEDLKDLFSFSEGTECDTHALLGCQCEGGGCDDDGGGGQPSDPLPSRA
CQLGMKPPAKQSRNLSMAELLDWQHLSGSSPHIHKDWCLENTEESVSYLFWHKSNTNSQK
QEQ
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgctctgccgctccaagccagcagcattccgccaaacgtgccaagttcatggtg
ccatacaaaccagcagaaccaccagtggcacacctgtcacaagcaggaaaaatatccctc
tccgccgcttctgagtttgagacggacagagaagcatcaagaggaatgacagtttcgggt
tcaacttgtgacactgacactgacagagtcaacactgtgtcatcaccaaaagcgacacaa
aagattcagcagatattctctcctccaagttttctgagtagaaagacagattctatctct
ggtagtggcacaggtcagtatcacacatcacaacaccgaaggtctctgccagcttctggt
acagctaatagaaatgaaacacgcagggacacacctggtgtagacaatgtcaagagcgat
gacaattgctgtgagtctgaatctgattcaaagcatgttgcagcagatgatgacagagca
gcagaaacaataacgcaccaaacacacagttcggttcttgaaacttctccacaaaatcct
gcacacaaatcagttgagaatgccattgagtctgacagcgttgaggcaggtgacaacgat
gcaagacttcctttaaagccgtttaatgctgcacgcaagttccagtctccgctgatgtct
cggtcttggcaagtcaaagagagcggtcagacggcagaccacaaaagaaaccatgatggt
ggaactggaaaggtcgcctatagtgccgcaagcaatcactcaatagcggtgaaagttgtg
tctggaaacagcggagctgttgatgggacagaatgtgctgtcaaatgtagctacttctct
gtcgtgtggtgcaaactgtccaagaaaaagcacaagaaatgggaaggggatgctgtgttg
gtgacccaaggacgccgtgttactctgtatgacatggatggaaaagaaatcggtaaaggc
agcggctacaaaagtgcagagctggaatcactggcagaagatgaaactcttgttgttggc
ggcaaagagatacaggtgatgtccaaactgagtgaggaacagttcaagtctggcaagtgt
tttgctggagcaggatcggtcaaagacgataacgtaccaactcctcataaacccactgca
ggccagttcaagtcctttacaaacccagtgcttgctcaaaaaggagatacaaatatggaa
tcggcagtgagcagagtgcagaatgttgccccgaagttcgacccctcagcacctgatgct
ctggttatgccacgacccactgcagctcaccagtggcagaacaacaagcagcagacgcca
gtggtggacgtggttgtggacccacacctgtgttatcacctgcgaccacaccagtgtgag
ggcgtcacctttctctacgagtgtgtcacgggcttgaggaactatgggggagcaggagca
attttggcggatgacatgggtctgggtaaaactttgcagtgcatcgcacttgtttggacg
ttactgaaacaaggaatgtatggaggaaaaccaccggtcaaaagagtcttggttgtcaca
cctgggagtctggtcaagaattgggcggcagagttcagaaagtggctgggaactgaaagg
ctacaggtgtttgtggcggctggagacagtcgagttgaggactatgtgaaaacggcagta
tatcctgtgctcatcatttcctacgagatgtttgtcagagggtacgaggttgtgaagagc
gtgccttttgaccttgtagtgtgcgatgaaggacacaggctgaaaaacgcggccataaaa
acaaattctctgatcagcagcctggacacacgcaggagagtggtgctgtcaggaactccc
atccagaatgacctgcaggagttctttgctgtcgtcgacttttgcaaccctggggtttta
ggttccagtgcagctttccgcagagtgtacgaagaccctatcttgcagtccaggcaacct
ggtgccacaaaggacattgtagacctgggagaagaacgggctgctgagctgtcgcgcctc
acgcgcatgtttgttctgcgacgcacacaggaggtcaacaacaaatatctaccacccaaa
gtggagctggttctcttctgtcaacccagtgctcttcagatcaacatctaccatgagatc
ctgcgaacaagcgttgtgcgttcatgcctgatggggagggggagtggggcagggaaaggg
gcgggagccccccacctgttagccatcgcagccctgaaacagttgtgcaaccaccccaaa
cttatcgcacccaaagtcttcaaggcctccgaagcattgactgaggatggtgatgctgtt
gacataagtgatggggacagcctgttcacaggccttgcagacaagtatcatacagagctg
agtgcagcgggtgtgagctgtggcgactctggaaagttggctgctctgaatgtcatcctt
gcaaatgtcttcggccactgccctcaagagaaggtggtcctcgtctcaaaccacaccaag
acacttgacctgctgcagcagttctgcagcgactgcggttacagctgtgtccgactggac
ggccacactcccactgcccagagacagcaaattgtcacacggttcaacagctcctatggc
caagaaaagattttcctgctgagctccaaggctggaggagtagggttgaatcttatcgga
gcatctcgtctcattctctacgacatcgactggaaccctgccaatgaccttcaggcgatg
gcgagagtgtggcgggatgggcagaagaggcaagtctacatctacagacttctcactaca
ggcagcttggaagagaaggtgtaccagagacagatcagcaagcagggactgagcggtgct
gtgatggatctcaaagcctcagactttcagttctctcaagaggacctcaaggatctgttt
tcatttagtgagggaacggagtgcgacacccatgccctgctgggctgccagtgcgagggg
ggaggttgtgatgatgatggtggtggtggtcagccttctgatcctcttccgtcgagggcc
tgtcagttaggaatgaaacctccagctaaacagtctcgaaacttgtccatggcagagcta
ctggactggcaacacttgtccgggtccagtccccacattcacaaggactggtgcttggaa
aacactgaagaatctgtgtcctacctattctggcataaaagcaacacaaacagccagaag
caggagcaataa
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