KEGG   Littorina saxatilis: 138959964
Entry
138959964         CDS       T10665                                 
Name
(RefSeq) DNA ligase 1-like isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
lsax  Littorina saxatilis
Pathway
lsax03030  DNA replication
lsax03410  Base excision repair
lsax03420  Nucleotide excision repair
lsax03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lsax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    138959964
   03410 Base excision repair
    138959964
   03420 Nucleotide excision repair
    138959964
   03430 Mismatch repair
    138959964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsax03032]
    138959964
   03400 DNA repair and recombination proteins [BR:lsax03400]
    138959964
Enzymes [BR:lsax01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     138959964
    6.5.1.6  DNA ligase (ATP or NAD+)
     138959964
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     138959964
DNA replication proteins [BR:lsax03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    138959964
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     138959964
DNA repair and recombination proteins [BR:lsax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     138959964
   NER (nucleotide excision repair)
    Other NER factors
     138959964
   MMR (mismatch excision repair)
    Other MMR factors
     138959964
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 138959964
NCBI-ProteinID: XP_070187766
LinkDB
Position
LG2:84443683..84530682
AA seq 1053 aa
MQKSIRSFFAASASAKPKVDPTPPSPKDVVSKKEDKKSPAKAPMRQKNSPPSKEKAAADS
PVKRSRQRKARIIESDDDDHEEENGTPVTEQSPEKSEGEPEMAATKKPQSRKKSRALSSD
DDEEVVPKSKKRKEDKVEGNGKPKPSEAKDGPKTPEKQVRLAAVKEAASSSPLLIPKRKT
ARKSVKGDDPAKKLKDLEAAKALVSEKTENKAADSPAKSDEDEDVKESAEENAAIKTEEK
EDEEEPMDVEEEVTQPETKPDEKKTAKAKSKTPAKAKSKTPAKSKSKTPKKPAEEKKAVK
KEKTDDGEKEEVDKEEKGEEQKNAADKKETTEEKKKAVPVSSFFAPRKATPSKEKAEEKD
EKKDTKKVTESPKPAGSFFKSSSDNKASEGNAEVTDTGYEPSKTKYHPVTDACWKHGDKV
PYLALAKTFEAIEATSARLRMIEILCNFLRSVIVLSPKDLLHCVYLCLNKLAPAYKGVEL
GIGDTVLLKAIAQATGRAVDKLKADVQEKGDLGIVAENSRSNQKMMFAPPKLTVAGVFSK
LKEIAEMTGNAVMLKKTEKIKGMFVACRQSEARYLIRSLSGKLRIGLAEQSVLTALGNAA
YLTPPGQEFPPEVVDASKGMGADAAKKKMEEASMIIKTTYCELPSYDSIISTLLEHGLED
LPKHCKLTPGIPLKPMLAHPTKGVSEVLRRFENMEFTCEYKYDGERAQIHLLDGGQIHIY
SRNSEDNTSKYPDIIRRMPKAVGSDVKSCVIDTEAVAWDCERKQILPFQVLSTRKRKDAD
ESQIKVQVCVYAFDLLYLNGESLVQKPFRLRRQLLRDLFTEVEGEFLFATSMISSNTEEI
DKFLDESIKGNCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYVDGVGDTLDVVVIGGFSG
TGKRTGKYGGFLLACYDEENEEFQSICKIGTGFKDEGLEKHYEYFKDHILPQPRPYYRWD
SAVEPDHWFDAVQVWEIKVADLSISPTHKAAIGLVDPEKGISLRFPRFLRIRDDKKPEEA
TNAAQVAEMYKGQQQIQNQQSGNKKAEEEEDFY
NT seq 3162 nt   +upstreamnt  +downstreamnt
atgcagaaatcaatcagatcattttttgcggcatctgcaagtgcaaagcccaaagtggac
cccacccctcccagtcccaaggatgttgtcagtaaaaaggaggacaagaaaagtcctgcc
aaggctccaatgcggcagaaaaactcaccccccagtaaagaaaaagctgcagcggattct
ccagtcaaaagatctcgtcagaggaaggccagaataattgaaagcgatgatgacgatcac
gaagaggaaaatggaactcctgtcaccgagcagtctccagaaaaatcagaaggagagccg
gagatggcagcaaccaaaaaaccacagagcagaaagaaaagcagagctttatcaagtgat
gacgatgaagaagtggtacccaagagtaagaagagaaaggaggataaagtagaaggaaac
gggaaacccaaaccctctgaagcaaaagacggacccaagacacctgaaaaacaggttaga
ctagcagctgtcaaagaggctgcgtcatcttcaccactcttgatacctaagagaaaaaca
gctcgaaaaagtgtaaagggagatgacccagcaaagaagttaaaagatctggaggcagca
aaagctttagtatcagaaaagacagaaaacaaggctgctgacagtcctgccaaaagcgat
gaagatgaggatgtaaaggaaagtgcagaagaaaatgctgcaatcaaaacagaggagaag
gaagatgaggaagaacctatggatgtggaagaggaagtgacccaaccagaaacaaaacca
gatgagaaaaagacagccaaggcaaaatccaaaacaccagccaaggcaaaatccaaaaca
ccagccaagtcaaaatccaaaacacccaagaaaccagcagaagaaaagaaagcagtgaag
aaggagaagacagatgatggggaaaaggaggaggtagacaaagaggaaaagggggaggag
caaaagaatgctgcagataaaaaagaaaccacagaagagaaaaagaaggctgttcctgtc
agcagtttttttgctccacggaaagctaccccaagcaaggagaaggcagaagaaaaggat
gaaaagaaagacaccaagaaggttacggagtcgcctaaacctgctggcagcttcttcaaa
tcttcaagtgacaacaaggccagcgaaggaaacgcagaggtgacagacacaggctacgaa
cccagcaaaaccaagtaccaccctgtcactgacgcctgctggaagcatggagacaaagtt
ccttatttggctctcgccaagacgtttgaagctattgaagctacgtctgccaggttacgg
atgattgagatcctgtgcaacttcctccgctcggtgattgtactgtcgcccaaagacctg
cttcactgtgtgtacctgtgtctcaacaaactggcgcccgcctacaaaggggtggagcta
ggcattggagataccgtgctcttgaaggctattgctcaggccacaggtcgggctgtggac
aagctaaaagctgatgttcaggaaaagggggacctgggaattgtcgcagagaattctcgt
agcaaccagaaaatgatgtttgcaccaccaaagctcacggtcgctggagtgttttccaaa
ctgaaggagattgcagaaatgacaggcaacgctgtgatgttgaagaagacggagaagatc
aagggaatgttcgtggcgtgtcgccagtcagaagctcgttacctcattcgttcgctgagc
gggaaacttcgcatcggtctggctgagcagtcggtccttaccgctctgggcaacgctgcc
tacctcactcctcctggccaagagtttccaccagaagttgttgatgccagcaaaggaatg
ggagcagacgctgccaagaagaaaatggaagaagcatccatgatcatcaagactacttac
tgcgagttgcctagttacgactccatcatcagcactttgctggagcacggactggaggac
ttgcccaaacactgcaagctgacgcctggtattccattgaagccgatgctggcccaccca
accaaaggtgtgagtgaggtgctgcggaggtttgaaaacatggagttcacctgcgaatac
aagtatgatggggagcgcgcacagatccatttgttggacggtggacagattcacatctac
agtcgtaactctgaagacaacacgtcaaaatacccagacatcattcgccgaatgcccaaa
gctgtgggcagtgacgtcaagtcctgtgtgattgatacggaagcggtggcgtgggactgt
gaaaggaaacagattctgcccttccaggttctcagcacaaggaagagaaaggacgcagat
gagagtcagatcaaggtacaggtgtgtgtctacgcctttgacctgctgtacctgaacgga
gagtcgctggtgcagaaaccgttccgcttgaggcggcagctgctgcgggatctcttcaca
gaggtggagggggagtttctcttcgccacgtccatgatctcctccaacactgaggagatt
gataaatttcttgatgagtctatcaaaggcaactgtgaaggtttgatggtcaagaccctt
gatgtggatgcaacgtatgaaattgccaagagatctcacaactggctcaagctgaagaag
gactatgtggatggagtaggagacacactggacgtggtggtcatcggaggtttctcaggt
accggcaagcgtacggggaagtacgggggattcctgctggcttgctacgacgaggagaat
gaggagttccagtctatatgcaagattggcactgggttcaaagatgagggcctggagaag
cactatgagtacttcaaggatcatattctaccgcagccacgcccctactaccgctgggac
tccgctgtcgagccagaccattggttcgacgctgtgcaggtctgggagatcaaggtcgct
gacctttccatctcgcccactcacaaggctgccattggactggttgaccctgaaaaagga
atttctctgcgattcccaagattccttcgtatccgtgacgataagaagcccgaggaggcg
acaaatgcagcacaggttgcggagatgtacaagggccagcagcagatacagaaccagcag
tctggaaataagaaagctgaagaagaagaagacttctactga

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