Littorina saxatilis: 138960007
Help
Entry
138960007 CDS
T10665
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
lsax Littorina saxatilis
Brite
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
138960007
3'-5' decay
Other 3'-5' decay factors
138960007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138960007
NCBI-ProteinID:
XP_070187826
LinkDB
All DBs
Position
LG2:86170313..86227461
Genome browser
AA seq
1738 aa
AA seq
DB search
MEDEKSRHDNLKRNSPGLGSGAVGQGLNGVRGDAAATNHPYAMQNPGEGGGGGDASNAEP
DAESDIWGTISNLAKQKRHADVLAACNKALKTDPNDEKILERKVRTLCQMGRFHRAFDLA
SQWLDKSPEHPIAKKELKRLKTVLAALEDQEDSDDEEVADVTSGATSSPSLMRKVDNVPS
KPVPRNTVRVLPPQPPQSQNSKQKRNNEEPKHFCPFCDISFERQEELDTHCHSDLHKKRL
ASDESHKWNYRPPPRGQTAEDYVLCQRFFETQRCPLGDKCTHAHSDAELDEWRERFAFRK
QQLQQARDKQLHGNTFIEQLLEKLTHPDGPQARLVQNLDFVKIHVNSDLKVNMTTKKCTN
AWTFTITSKMCLHAVGLLDDANRSYFHISSISVGPKKTQKYQNLETHCQEWTNQDTASKG
QGEYVYRVKIVFKTDIYGTFRQQVVLGLGLDTVVVRDVQVESCPATDPEKLSKDLELSAA
GRWTADSVAVVPFLPPFSTQTDQEEQLLKKYILPRPERLSLSETLMQSLSKDNYRLWMHE
MLYLEEMAELGFVQRFNVTGDLQLVNRFLLMPGALSSAKYTREGELFARLKLEDVLSEDS
SAGRLILQNAQTAWVAPAGSGDNDDGSSKPKTQVYEAQIEDKGKTFIFLRLSADCVSDLN
LTCDVEFHAQIQFQLNRLPKCEMHSAVDSLPTLNIVFPSVKNIPPLPPPLEKVLSAVEEM
RLNEQQREAILTITSPVGTKQPPLLIIGPFGTGKTYTLAQAAKLVLEQEDTRILICTHSN
SAADLYIKDFLHPYVEDGHVEARPLRVYYRHRWVHTIPEVIIPYSLWSGERQMFCVPTEE
DVKKHRVIITTLSTARYISDIGLPPGFFTHIFIDEAAQALECETLIPLGMADEQTRIVLA
GDHLQISPEVYSDYTRQQGFHISFLERLYDLYPRESSGMVMLCENYRSHKAIVDFTSELF
YDQRLVASGKQSPHSTFYPLSFCHAKGIEEQHENSTGFYNLSEVYEIVDRVEELRRKWPE
EWGNMENNGVSVVAPYHDQVVRIRNELRKKKIYNISVERVLNVQGKQYRVIIISTVRTRN
SCRSDSSAEEEYLDYGFLSNVKLLNTAITRAQSLVMVVGDPLSLCLVGKCRKVWEYFLET
CHQNKSLFGITWTELRASLDRVEVAKNYVLNPMAPEFIPNRRYHMTLQVQETNTSAAQPH
GATWPYLVNQHPAVIQPSPYQLVHPQMMPYYGMPMYSPYIGPVFMRAPGGGGGMRLGHHH
RLPRPGMHPGAHRGEGVRMADASHTLRSPGRFHQRGRLPVYQLPRMPLPLHYPLPQVHPM
YTPQIHPGYHMMPEDPRVASLHAPFPYSAAYHPQQLLQLRGPITGPHSHLHGPHFHQGLP
LHAHPTHAASPSPQGRGGTPSNDDSQDSGSSPEAGRSSSSSVTGGFQVLPNVKHVPPHLM
RGGLQPSSQSSSRSSTPINPERGPIPVPSYLNEGRRTPVSDRPYSPANYAARSSPLSEAH
RDRSGSRERDFGASESADLGNPFAASGAGNSPSGESSPPESKVPPLVSSRKTNNPKQLRL
KTGFSRQFSDDLPTPTAITDIVRMIEENIEEGSENSDSSASSPVMPQRTQLMTRLNGRNA
ALSSLQLDLVAAQRQQQNAMMGGSNNTSHSTPSSSDSPATMNGERPTYAGIVGKPHVQGQ
GLMPDISQVEPQTPRTPTGFTTPGSDPQLDPYGILKGLNIEATSVGRRLNRQDSEAFP
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgagaaaagcagacatgacaacctgaaacgcaactctccagggctagggtcc
ggcgccgtagggcaggggctgaatggcgtgaggggcgatgccgcggcaaccaaccacccc
tacgccatgcaaaaccccggcgaggggggtggcggcggcgatgccagcaacgcagaaccg
gacgctgaatctgacatttggggaacgatcagcaatctcgccaaacagaaaagacatgca
gatgtgctagcagcgtgcaacaaagcgctcaagacagaccccaatgatgaaaagattctg
gaaagaaaagtacggaccctctgtcagatgggcagatttcaccgagcgtttgaccttgct
tcacagtggctggacaaaagtccagagcacccaattgccaaaaaggaactgaagagattg
aaaacagtgctggcagcgttagaagatcaggaggattcagacgatgaggaggtagcagac
gtgacatcgggagccaccagctccccgtccctgatgcgcaaagttgacaacgtccccagc
aaacctgttccgcgcaacactgttcgagtcttgccccctcagcctcctcaaagtcaaaac
tccaaacagaaacgaaacaatgaggaacccaagcacttctgtccattctgcgacatcagt
tttgagcgtcaagaagaactggacacccattgccacagcgacctgcacaagaaacgtctg
gcgtccgatgaaagccacaaatggaactaccggcctccccctcgagggcagactgctgaa
gattatgtactatgtcagaggttcttcgagacacagagatgtccactgggtgacaagtgc
actcacgctcactcggacgcagaactggacgagtggagggagcgcttcgcttttcgcaaa
cagcagttacaacaggcgcgcgacaaacagctacacggcaacaccttcattgagcaactc
ctggagaaactcacacaccctgacggaccacaggctagattggtgcagaacctggacttt
gtgaagatccacgtgaactctgacttgaaggtcaacatgaccaccaagaaatgcaccaat
gcctggaccttcactatcacaagcaagatgtgcctgcacgctgtggggttgctggacgac
gccaaccggtcgtacttccacatctccagcatctcggtggggcctaagaagacccagaag
taccagaacctggagacacactgccaggagtggaccaaccaggacaccgccagcaaggga
cagggcgaatacgtctacagggtcaagatcgtgttcaagacagacatctacggaacgttt
cgccagcaggtggtgctgggattaggccttgacactgtggtggtgcgcgatgtacaggtg
gaatcatgtcccgctactgaccctgaaaaactcagcaaagaccttgaactgagcgctgct
ggaagatggacggccgactctgtggccgtggtgcccttcttgcctccgttctccacacag
acagatcaagaggaacagttgctgaagaagtacatcttgccgcggccagagcgactgtcg
ctctccgagaccctgatgcagtcactcagcaaggacaactacaggctctggatgcacgag
atgctctacctggaagaaatggcagagctgggatttgtgcaaaggttcaacgtaacagga
gacctgcaactggtgaatcgattcctgttgatgccaggagcgctgagttcagccaagtac
acacgcgaaggcgagctctttgcacgtctcaagttggaagacgttctctctgaagactcc
agtgcagggcgtctcatcttacaaaatgctcagactgcttgggttgcgccggcaggctct
ggtgacaatgatgatgggagttctaaacctaaaacccaggtgtacgaagctcagattgaa
gataaagggaagacttttatcttcctgcgtctgtcagctgactgtgtttcggatctgaat
ttgacctgtgatgtagaatttcatgctcagatccagtttcaactgaaccgcctgccaaag
tgtgagatgcactccgccgtggacagtcttcccacactcaacatcgtgttccccagcgtc
aagaacatccctcccctccccccaccactggaaaaagtcctatcagctgtagaagaaatg
cgactcaatgaacagcaaagggaagccatcctgacgattacctcccctgtcgggacaaag
cagccacccttgctgatcatcggtcccttcggtacaggcaaaacctacacgctggctcaa
gcagcgaagctggttctggaacaagaagacactcgcattcttatatgcacccactccaat
agcgctgccgacctgtacatcaaggattttctccacccctatgtggaagacggacacgtg
gaggctcgaccgctcagggtctactaccgccatcggtgggtgcacaccattccagaggtc
atcattccctacagtctctggtccggcgagcgccagatgttttgtgtacccactgaggag
gacgtcaagaaacatcgagtcatcatcaccacgctgtccactgccagatatatcagtgat
atcggccttcccccaggtttcttcacccacatcttcatcgacgaagcagcacaggcgttg
gagtgtgagacgttgatacctctggggatggctgatgagcagacgcgcatcgtgctggct
ggagatcacctgcagataagcccagaagtgtactcagactacacccgccaacaagggttc
cacatatccttcctggagcgtctctacgacctttacccccgcgagtcatcaggcatggtg
atgctgtgcgaaaactaccgctcccacaaggccatagtggacttcacctcggaactgttc
tacgaccagcggctggtggcgagcggcaaacaatcgccacactccactttctacccactg
tcgttttgccacgccaaggggattgaggaacagcatgagaacagcactggattctacaac
ctgtcagaggtgtacgagatagtggacagagtggaagagttgcggcgcaagtggccggag
gaatgggggaacatggagaacaacggtgtcagcgttgtcgccccctaccatgaccaggtg
gtgcgtatcagaaacgagctgcgcaagaagaagatatacaacatctctgtggagagagtc
cttaacgtccagggcaagcagtaccgagtgatcatcatcagcacagtgcgcacacgcaac
agttgtcgctcggacagcagcgcggaggaggagtacctggactacggcttcctctccaac
gtcaagctgctcaacaccgctatcacgcgagctcagtccctggtgatggtggtgggcgac
cccctgtctctctgcctggtcggaaagtgcaggaaagtgtgggagtatttcctggagacg
tgccaccagaacaagagtctgttcggcatcacctggacggagctcagggcgtcgcttgat
cgcgtggaggtggccaaaaattacgtactcaacccgatggcgccagagttcatacccaac
cgacgctaccacatgactctccaggtgcaggaaaccaacacctcggccgctcagccccat
ggggccacctggccgtaccttgtgaaccagcaccctgccgtcatccaaccgtcaccctac
cagttggtgcacccccagatgatgccctactacggtatgcccatgtactccccctacata
ggtccagtcttcatgcgggcaccagggggaggagggggcatgcgcctcggtcaccaccac
cgcctgccacgacctggcatgcaccctggggctcaccgtggtgaaggggtgaggatggcc
gacgcgtcccacactctgcgctcaccgggaaggttccatcagcgaggacgcctgccggtc
taccagctcccccgcatgcccctccccttacactaccccctccctcaggtccaccccatg
tacaccccccagatccaccccgggtaccatatgatgccggaggatcccagggtggcgtca
ctgcatgccccgttcccgtacagtgccgcgtaccacccccagcagctgctgcagcttcgc
gggcccatcacgggccctcacagccacttgcacgggccccactttcaccagggcctgccg
ctccacgcccaccccacccatgccgccagcccctccccccagggtcgcggtggaacgccc
agcaacgacgacagccaggatagtgggtcatcccctgaggctggtcggtccagcagctcg
agcgtgacgggcggtttccaggtgctgcctaatgtcaagcatgtgccgcctcacctgatg
cgcggcggtctgcagccatccagtcagagctcgtcacgctccagcacacccatcaacccc
gagcggggccccatccctgtcccctcctacctgaacgaggggcggaggacccccgtgtca
gaccggccctacagtcctgctaactacgcagcccgcagttccccgctcagtgaggcacac
agagatcgctcaggtagcagggagagggacttcggggcctcggagtctgcagacctcggc
aatccctttgccgcatcaggtgctgggaacagccccagtggagagtccagccccccagag
agcaaggtcccccccttggtcagcagcaggaagaccaacaaccccaagcagctgcggctc
aaaacaggcttcagccgccagttcagcgacgatctgcctacacccacagccatcacggat
atcgtgcgcatgatcgaggagaacatcgaagaaggctcggagaactcggactcctcagcc
tcctcccctgtcatgccccagcgaacccagctcatgacgcggctaaacggtcgcaacgct
gcactgagctcgctgcagctggacctggttgcagcgcagcgacagcagcagaatgcaatg
atgggtggcagcaacaacacgtcccactccacaccctcctcctccgattcccctgccacc
atgaacggagagcggccaacgtatgccggcatcgtgggcaaacctcacgtccagggtcaa
ggccttatgcccgacatcagtcaagtggaaccgcagacgccccgcacgcctaccggcttc
accacccctggttctgatcctcagcttgacccctacggcatcctgaagggtctgaacatc
gaggcaacctcggtgggacggcggcttaaccgccaagattctgaggcctttccttga
DBGET
integrated database retrieval system
