| Entry |
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| Name |
(RefSeq) probable ATP-dependent RNA helicase DDX5
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| KO |
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| Organism |
lsax Littorina saxatilis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:lsax00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138960085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:lsax03041]
138960085
03009 Ribosome biogenesis [BR:lsax03009]
138960085
Enzymes [BR:lsax01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138960085
Spliceosome [BR:lsax03041]
Complex A
U1 snRNP components
U1 related factors
138960085
Complex B
138960085
Ribosome biogenesis [BR:lsax03009]
Eukaryotic type
Pre-60S particles
Helicases
138960085
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG2:89273340..89295745
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| AA seq |
1080 aa
MIFRHLLSKVQQVAAVGFRQYSTNDSLFLYGASSMSHRDRHRDRDRKRDRSRSRSPRRDR
DRDRGDRGFQGFRGGGGGGGGWGGGGGGGRGGNPGQNLRKPRWDVSKLIKFEKNFYQAPP
AVVHRPQSEIQQFYAEKEITVHGREIPNPIFSFDEAGFPDYVMHQLHKNSWTAPTPIQSQ
GWPIAMSGRDCVGIAQTGSGKTLSFILPAIVHINHQPALERGDGPIALVMVPTRELAQQV
QVVAVEFGQVSHLRTACVYGGAPKGPQIRDLERGCQICIATPGRLIDLLESGKTNLRRTT
YLVMDEADRMLDMGFEPQIRTILEQIRPDRQTLMWSATWPKEVQRLAEDFLTNYVQVTIG
SLQLTANHNILQIIDVCQEYEKEEKLSKLLKEIMREKENKTIIFAETKRKVDDITRRIKR
DRWSAIPIHGDKSQSERDWALNDFRTGKTPILVATDVASRGLDVDDIKFVINLDYPNNSE
DYVHRIGRTGRSNNTGTAYTFFTPNNAKQAPELIAVLQEAKQVVNPKLVQLAESARSFSG
RQRFRGRGRDKDQRFSAPKSDFSSRNDFSSRSDFSSRREDRGGSRERDRDSGNRDRRDSR
PDREGGRRSRFSDAPSAEDSSSSLPSLMNMHTNNAATPTGAGAGPPKPLMTSSNFQNVSN
GMGGQQQQQQQQQQQKFNQNPGNFSQNAAGNFNSNQNGGNVNGQGAGGFNQNPNNFNQGN
QGAGGYGNQNAAGFRPGMNPNFTGSGGDNMNQKGGPGFNQNPAGNNFQQGNQNQQQQQNN
VPPNFNAWMNANFGNKGGSGNNSGGNMGSQGGNMGPQGGNNMGPQGGNNMGPQGGNNMGP
QGGNNMGPQGGNNMGPQGGNMGMQGGNMGPRGAAPPNPNMGPQVGNMGPRGPGMVPPMGN
MRPLAPFPGMPGMGNLPAGMPNMGPRPPTLSPGGPQPPVNSTSSAGKPMGVPPPPPANSQ
ANSMGPKGVAPGFHNTFNPSMPPTPMSFPQPPRPPMPNMSAGNMNPAGNMNPAGNMTSMM
QQQWQHMQQAPNMGMMFNPPPPPSQGGKPPLPPGQPGSQPPPPPPPVNPAPPPPPPPPSF |
|---|
| NT seq |
3243 nt +upstreamnt +downstreamnt
atgatcttccgccatttgctgtctaaagtacagcaagtagcagccgttggatttcgacaa
tattcgacaaacgattcgcttttcctgtacggcgccagtagcatgtcacacagagacaga
catcgagacagggacaggaagagggacagatctcgcagcagaagtcctcgcagagatcgt
gatcgcgacagaggtgaccgtggatttcaaggtttccgaggcgggggtggcggcggcgga
ggatggggtggcggtggaggagggggcagaggcgggaacccggggcagaaccttcgcaaa
ccgcgatgggacgtcagcaagctgatcaaatttgagaaaaacttctaccaggcaccccca
gctgttgttcatcgtcctcagtcagagattcaacagttctatgctgagaaggaaatcaca
gtacatggcagagagatacccaatcctatattttcctttgatgaagctggcttcccagat
tacgtcatgcatcagttgcacaaaaacagctggaccgccccgacccccattcagtcccag
ggctggcccattgctatgtcgggacgtgactgtgttggtatagctcagactggctctggc
aaaaccctcagtttcattttgccagccattgtgcacataaatcatcagccagccctggag
cgcggagatggtcctattgcattggtgatggttcccacccgtgagctggcccagcaggtg
caggtggtggccgtggagttcggtcaggtctcacatttacgcaccgcttgtgtctatggt
ggcgcccctaaagggccacagatcagggatcttgaaagaggttgtcagatttgcatcgcc
acccccgggcgactgattgatttattggagtctggtaaaactaacctgcgccgaacgacc
tacctggtgatggacgaggctgaccgcatgctggacatgggatttgagccgcagatcaga
accatcctggagcagatcaggcctgatcgtcagacactgatgtggagtgccacctggccg
aaggaagtgcagcgtctggcggaagacttcctgaccaactatgtgcaggtcaccatcggc
tccctccagctgaccgccaaccacaacattctgcagatcatcgacgtctgtcaggagtat
gagaaagaggaaaagctgtctaagctgttgaaagagatcatgagggagaaagagaacaag
acgatcatctttgccgagaccaagcgcaaggtggacgacatcacccgccggatcaagcgc
gacaggtggtctgccattcccatacacggagacaagtcacagagcgagcgagactgggcc
ttgaatgatttccggactggaaaaacgcctatactcgtggccactgatgttgcttcaagg
ggcttggacgtggacgacatcaagtttgtcatcaacctggactaccccaacaactctgag
gactacgtccaccgcatcgggcgcacggggcgcagcaacaacacgggcacagcctacacc
ttcttcacccccaacaacgccaagcaggccccggaactgatcgcagtgctgcaggaagcc
aagcaggtggtcaaccccaaactggtccagctggccgagtcggcacgcagcttctcaggt
cgccagaggttcagagggcgtgggcgtgacaaggaccagcgtttctcagctcccaagagt
gacttttcctccagaaatgatttctcctcccgaagtgacttctcttcaaggagggaggac
cgtggaggaagccgagaacgtgacagggactctggcaaccgcgaccgcagggatagccgt
ccagaccgtgagggaggtcgtcgatcacgcttcagcgatgctccttctgcagaggactcg
tcttcctcgctgccgtccttgatgaacatgcacaccaacaacgctgcaacgcccaccggt
gctggtgctggcccgcccaaacccctcatgacctccagcaactttcagaatgtgagcaat
ggaatggggggtcagcagcagcaacaacaacaacagcagcagcagaagttcaaccagaat
cctggaaacttcagtcagaatgcagcaggaaatttcaacagcaaccagaacggtgggaat
gtgaacggccagggagcaggaggtttcaaccagaaccccaacaacttcaaccagggcaac
cagggtgcagggggctacggtaaccagaatgcggcaggcttcaggccagggatgaaccct
aatttcacggggtcaggaggcgacaacatgaaccagaagggtggacccggcttcaaccag
aacccagcagggaacaactttcagcagggcaatcagaaccaacagcaacagcagaacaat
gttcctcccaatttcaatgcctggatgaacgccaactttggcaacaaaggtggcagtgga
aataactctggtggcaacatgggctctcagggaggcaacatgggcccgcagggaggcaac
aacatgggcccacagggtggcaacaacatgggtccacagggtggcaacaacatgggtcca
cagggtggcaacaacatgggtccacaaggtggcaacaacatgggtccacagggtggcaac
atgggcatgcagggtggcaacatgggcccaagaggggcagccccaccaaaccctaacatg
ggcccacaggtaggcaacatgggtcctcgcggcccagggatggttccacccatgggcaac
atgagacctctggctcctttccctggcatgcccggcatgggcaacctgccagctggcatg
cccaatatgggcccacgacccccaacactgtcccccggcgggcctcagcctcccgtcaac
tcgacaagcagtgctggcaagcctatgggcgtccccccaccccctcctgccaacagccag
gctaacagcatgggccccaagggggttgccccgggatttcacaacaccttcaacccctcc
atgccccccacccccatgtcattcccccagcctccccgccctcccatgccaaacatgtcc
gcaggcaacatgaatcctgctggcaacatgaaccctgccggcaacatgacctccatgatg
cagcaacagtggcaacacatgcagcaagcgccaaacatgggcatgatgttcaaccctccc
ccacccccctcacagggcggcaagccccctttgcccccaggtcaaccagggtcccagcca
cccccacccccgcccccagtcaaccctgctccccctccaccccctcccccgcccagcttc
tga |
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