Littorina saxatilis: 138960085
Help
Entry
138960085 CDS
T10665
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lsax Littorina saxatilis
Pathway
lsax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138960085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsax03041
]
138960085
03009 Ribosome biogenesis [BR:
lsax03009
]
138960085
Enzymes [BR:
lsax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138960085
Spliceosome [BR:
lsax03041
]
Complex A
U1 snRNP components
U1 related factors
138960085
Complex B
138960085
Ribosome biogenesis [BR:
lsax03009
]
Eukaryotic type
Pre-60S particles
Helicases
138960085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
138960085
NCBI-ProteinID:
XP_070187915
LinkDB
All DBs
Position
LG2:89273340..89295745
Genome browser
AA seq
1080 aa
AA seq
DB search
MIFRHLLSKVQQVAAVGFRQYSTNDSLFLYGASSMSHRDRHRDRDRKRDRSRSRSPRRDR
DRDRGDRGFQGFRGGGGGGGGWGGGGGGGRGGNPGQNLRKPRWDVSKLIKFEKNFYQAPP
AVVHRPQSEIQQFYAEKEITVHGREIPNPIFSFDEAGFPDYVMHQLHKNSWTAPTPIQSQ
GWPIAMSGRDCVGIAQTGSGKTLSFILPAIVHINHQPALERGDGPIALVMVPTRELAQQV
QVVAVEFGQVSHLRTACVYGGAPKGPQIRDLERGCQICIATPGRLIDLLESGKTNLRRTT
YLVMDEADRMLDMGFEPQIRTILEQIRPDRQTLMWSATWPKEVQRLAEDFLTNYVQVTIG
SLQLTANHNILQIIDVCQEYEKEEKLSKLLKEIMREKENKTIIFAETKRKVDDITRRIKR
DRWSAIPIHGDKSQSERDWALNDFRTGKTPILVATDVASRGLDVDDIKFVINLDYPNNSE
DYVHRIGRTGRSNNTGTAYTFFTPNNAKQAPELIAVLQEAKQVVNPKLVQLAESARSFSG
RQRFRGRGRDKDQRFSAPKSDFSSRNDFSSRSDFSSRREDRGGSRERDRDSGNRDRRDSR
PDREGGRRSRFSDAPSAEDSSSSLPSLMNMHTNNAATPTGAGAGPPKPLMTSSNFQNVSN
GMGGQQQQQQQQQQQKFNQNPGNFSQNAAGNFNSNQNGGNVNGQGAGGFNQNPNNFNQGN
QGAGGYGNQNAAGFRPGMNPNFTGSGGDNMNQKGGPGFNQNPAGNNFQQGNQNQQQQQNN
VPPNFNAWMNANFGNKGGSGNNSGGNMGSQGGNMGPQGGNNMGPQGGNNMGPQGGNNMGP
QGGNNMGPQGGNNMGPQGGNMGMQGGNMGPRGAAPPNPNMGPQVGNMGPRGPGMVPPMGN
MRPLAPFPGMPGMGNLPAGMPNMGPRPPTLSPGGPQPPVNSTSSAGKPMGVPPPPPANSQ
ANSMGPKGVAPGFHNTFNPSMPPTPMSFPQPPRPPMPNMSAGNMNPAGNMNPAGNMTSMM
QQQWQHMQQAPNMGMMFNPPPPPSQGGKPPLPPGQPGSQPPPPPPPVNPAPPPPPPPPSF
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgatcttccgccatttgctgtctaaagtacagcaagtagcagccgttggatttcgacaa
tattcgacaaacgattcgcttttcctgtacggcgccagtagcatgtcacacagagacaga
catcgagacagggacaggaagagggacagatctcgcagcagaagtcctcgcagagatcgt
gatcgcgacagaggtgaccgtggatttcaaggtttccgaggcgggggtggcggcggcgga
ggatggggtggcggtggaggagggggcagaggcgggaacccggggcagaaccttcgcaaa
ccgcgatgggacgtcagcaagctgatcaaatttgagaaaaacttctaccaggcaccccca
gctgttgttcatcgtcctcagtcagagattcaacagttctatgctgagaaggaaatcaca
gtacatggcagagagatacccaatcctatattttcctttgatgaagctggcttcccagat
tacgtcatgcatcagttgcacaaaaacagctggaccgccccgacccccattcagtcccag
ggctggcccattgctatgtcgggacgtgactgtgttggtatagctcagactggctctggc
aaaaccctcagtttcattttgccagccattgtgcacataaatcatcagccagccctggag
cgcggagatggtcctattgcattggtgatggttcccacccgtgagctggcccagcaggtg
caggtggtggccgtggagttcggtcaggtctcacatttacgcaccgcttgtgtctatggt
ggcgcccctaaagggccacagatcagggatcttgaaagaggttgtcagatttgcatcgcc
acccccgggcgactgattgatttattggagtctggtaaaactaacctgcgccgaacgacc
tacctggtgatggacgaggctgaccgcatgctggacatgggatttgagccgcagatcaga
accatcctggagcagatcaggcctgatcgtcagacactgatgtggagtgccacctggccg
aaggaagtgcagcgtctggcggaagacttcctgaccaactatgtgcaggtcaccatcggc
tccctccagctgaccgccaaccacaacattctgcagatcatcgacgtctgtcaggagtat
gagaaagaggaaaagctgtctaagctgttgaaagagatcatgagggagaaagagaacaag
acgatcatctttgccgagaccaagcgcaaggtggacgacatcacccgccggatcaagcgc
gacaggtggtctgccattcccatacacggagacaagtcacagagcgagcgagactgggcc
ttgaatgatttccggactggaaaaacgcctatactcgtggccactgatgttgcttcaagg
ggcttggacgtggacgacatcaagtttgtcatcaacctggactaccccaacaactctgag
gactacgtccaccgcatcgggcgcacggggcgcagcaacaacacgggcacagcctacacc
ttcttcacccccaacaacgccaagcaggccccggaactgatcgcagtgctgcaggaagcc
aagcaggtggtcaaccccaaactggtccagctggccgagtcggcacgcagcttctcaggt
cgccagaggttcagagggcgtgggcgtgacaaggaccagcgtttctcagctcccaagagt
gacttttcctccagaaatgatttctcctcccgaagtgacttctcttcaaggagggaggac
cgtggaggaagccgagaacgtgacagggactctggcaaccgcgaccgcagggatagccgt
ccagaccgtgagggaggtcgtcgatcacgcttcagcgatgctccttctgcagaggactcg
tcttcctcgctgccgtccttgatgaacatgcacaccaacaacgctgcaacgcccaccggt
gctggtgctggcccgcccaaacccctcatgacctccagcaactttcagaatgtgagcaat
ggaatggggggtcagcagcagcaacaacaacaacagcagcagcagaagttcaaccagaat
cctggaaacttcagtcagaatgcagcaggaaatttcaacagcaaccagaacggtgggaat
gtgaacggccagggagcaggaggtttcaaccagaaccccaacaacttcaaccagggcaac
cagggtgcagggggctacggtaaccagaatgcggcaggcttcaggccagggatgaaccct
aatttcacggggtcaggaggcgacaacatgaaccagaagggtggacccggcttcaaccag
aacccagcagggaacaactttcagcagggcaatcagaaccaacagcaacagcagaacaat
gttcctcccaatttcaatgcctggatgaacgccaactttggcaacaaaggtggcagtgga
aataactctggtggcaacatgggctctcagggaggcaacatgggcccgcagggaggcaac
aacatgggcccacagggtggcaacaacatgggtccacagggtggcaacaacatgggtcca
cagggtggcaacaacatgggtccacaaggtggcaacaacatgggtccacagggtggcaac
atgggcatgcagggtggcaacatgggcccaagaggggcagccccaccaaaccctaacatg
ggcccacaggtaggcaacatgggtcctcgcggcccagggatggttccacccatgggcaac
atgagacctctggctcctttccctggcatgcccggcatgggcaacctgccagctggcatg
cccaatatgggcccacgacccccaacactgtcccccggcgggcctcagcctcccgtcaac
tcgacaagcagtgctggcaagcctatgggcgtccccccaccccctcctgccaacagccag
gctaacagcatgggccccaagggggttgccccgggatttcacaacaccttcaacccctcc
atgccccccacccccatgtcattcccccagcctccccgccctcccatgccaaacatgtcc
gcaggcaacatgaatcctgctggcaacatgaaccctgccggcaacatgacctccatgatg
cagcaacagtggcaacacatgcagcaagcgccaaacatgggcatgatgttcaaccctccc
ccacccccctcacagggcggcaagccccctttgcccccaggtcaaccagggtcccagcca
cccccacccccgcccccagtcaaccctgctccccctccaccccctcccccgcccagcttc
tga
DBGET
integrated database retrieval system
