Littorina saxatilis: 138961917
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Entry
138961917 CDS
T10665
Name
(RefSeq) rotatin-like isoform X1
KO
K16484
rotatin
Organism
lsax Littorina saxatilis
Brite
Cilium and associated proteins [BR:
lsax03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
138961917
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138961917
NCBI-ProteinID:
XP_070189691
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Position
LG1:complement(12817276..12854183)
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AA seq
1701 aa
AA seq
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MVDTCRFVLQANSKALQPEEVLALADSAVTSLPYHLHLNLITQFVAFFSHVSSRKSSDKS
IQARCAGVLLKLLSHPLLEVRQHTYQTLLTTIQTCLNADKEAASGSYTGHLEAKFILNSD
ILYEITCFGLADPDNKVSNLAMELLFHLLQSHLLLGDILWGELMSSLLKSLPILHSYTDM
KTRFGRRVWTMLDPTVASDSLCLLDKLRGNLRLMFSAEAGLRDEAVKRLCWFLANESGGS
GRLPNSGQLDPRQLPSLFIMETQHFLDEDNTRSVFQVDGLKQVYNIFTADPVDPGVKKSA
ADQMAIMLQDPHLHGAFRESGGLEVVLSTLRQSMNAPSRTEHQNPNIPVVPACVTMLRHL
LHHDYTLRHNLSHDPNVYYDLLRVSLMLVRDESVSYQVSHILTLLLFDEVAKFDISSSQK
DQADRNFSLPAVITKRYRLPFRPTVHHTVSPNSVLSPPEHDILKTAAPQEMLRVAWNVAW
CGGLDNLLQLLKAGGAKLDQLRDFNKAMVLTPTDRAVVKATGLQWGLQEGVYAVANATSH
HDVVAGLTGILSVTATIPSSECADLVNQLNWTAVLDRFLQVTPSSSQDESLLLEVLRFMN
SIIQLSASIPDEMAQWLAQRLYDGTGPLVGLLNRTPGGGEGDEVADASTIVKRSLDKVLL
KFISTFISRLPYKLHTRLSVAQSRGDLARRLLLRLNISAAPHFYNLAALEGTLLCLMHLT
ARPGWSAESGDMEPTAQCSHVLNCLLEVVSAFHIGRGSTSMSYMGRGVTKAATLCLRHLA
HEMVSCTDDKEWAKNWLYSRQGADAVAEPGLNWMLTLWAYRDAEVRAAGLGIAVALTSTE
VGRVLVTNNCKHIPGGIWGAAFSVLLDPSECSIVRQQAALLLVNLTSETIPSTTGDATSA
SVWQGPVVTDVDSNVSLVGLNALLALLHHSHFYPQLSAMLSSFFPSTVLQPVLVTTEVPL
HSLDSSQTTVTSTEGSTTPRGRDFLGQPSLHTTDQEGGATSARSTGRSNYTRVSQQDSQV
SVTSSSSGTTRTGLQLDSSAAPSSQDGGAGGDEKGMTTVVTPCLVAAVSQLLGNLVVMAP
HDTFNSLASHNVINTLLNMIDTSLLQDLCRQLTSGPHRSGSMLTLRDLLRMYNAIVSLVA
TSVKLNSPTRAALLGNKVALKAIASLMLLQCDSAGDLVLECRQLWLSVLRLLCTLLQTQS
AAALLSLTDVLASIWIDFCDALVHLVEVRSGETQALFTTVTSFLSLLLTEEAKLVCRDPQ
RCDDTATLTHCLDVSKAKNKPAVEKGKDTGTFTTGSSLSKVLVGTYELTSGSTVGSKGRV
SGDAQQVINTLKSLLAVSQSAKHTALDMGLVETLLETMKQTHARLSLDSLQVGKTSRRKD
EGLLQELILTMNILRNLLCGNENVKLACMHSGLAGVVHKLWAWCLQDYSLMSAALALLLN
FTAKCPAAATSIASTVSGAVGPSASRQQQISSSLVLAIVKATQREIDRDMMPSSAVGPGP
SVSHLKLLFSLLTSLSLSSECRTLLWKSTFLQDFSKLSPSRSRKSRSRQVLDALWFELAV
GLSFSSDGQQMLLRINECLTVLLDFVENGGGSPHCQEYAMLVLRNMCCHATNKPKLLANE
NVIPSCVDLVESAESSRLQILAASALWALAYNNHKAKMAMKGVNVIPRMRACLKNVQNLG
HSMEDVQCSENIQAVISTVST
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atggttgacacctgtagattcgtgctgcaggccaattctaaggccttgcagccagaggag
gttctggcactcgctgacagtgctgtcaccagtcttccctaccacctgcacctgaatttg
atcacacagtttgtcgccttcttctctcacgtaagcagcagaaagagttctgacaagagc
atccaagcaaggtgtgcaggtgtgctgcttaagcttctctcccacccgctgttggaggtg
cgacagcacacctaccagacactgctcacaaccatacagacatgcctgaacgcagacaag
gaggcggccagcggcagctacacaggacacctggaagccaagttcatcctcaacagtgac
attttgtatgaaatcacgtgctttggtctggctgacccggataacaaggtatccaatctg
gcgatggagctgctttttcacctgctgcagagccacctgttgctaggcgacattctgtgg
ggagagctcatgtcctccttgctcaagtccctccccatcctccactcctacacagacatg
aaaacccggtttggccgacgggtctggactatgctggaccccactgtcgcttccgacagc
ctgtgtctgctggataaactgcgaggcaacctgcgcctcatgttctctgctgaggctgga
cttcgtgacgaggcggtgaagaggctgtgctggtttctggccaacgagtctggtggaagc
gggcgactgcccaacagcggtcagcttgaccctcgtcagctgccgtccctgttcatcatg
gagacacagcatttcttggatgaggacaacactagatccgtcttccaggtggacggactg
aaacaagtgtacaacattttcacagcggacccagtggatcctggggtcaagaaatccgct
gctgaccagatggccatcatgctgcaagatcctcacttgcacggagcgttcagagagagc
ggaggcctggaagtggttctgtccaccctgcgtcagtccatgaatgctccgtctcgcaca
gagcaccagaatcccaatattcctgtggtgccagcgtgtgtgaccatgttgcgacaccta
cttcatcatgactacacactacgccacaacttgagccatgacccaaacgtctactatgac
cttctcagagtgagtttgatgctggtgagagatgagagtgtaagctaccaggtgtcccat
attctgaccctgctcctcttcgacgaagttgccaagtttgatatcagctcctcccagaaa
gaccaggcagacagaaacttctctctaccagcagttattacaaagaggtaccgactgccc
ttccgaccaacggttcaccacacagtgagccccaactcggtgctatcaccgcctgagcat
gacatcctgaagacagcagcgccacaggagatgctgcgagtggcgtggaacgtggcgtgg
tgtggggggctggacaacttgctgcagctgttgaaggcaggtggcgccaagctggatcag
ctcagagacttcaacaaggcaatggtgctgacccctacagaccgagcggtggtcaaggcg
acgggactgcagtgggggctgcaggagggggtgtacgcggtggccaacgccacgtctcac
cacgacgtagtggccggactgaccggcattctgtccgtcacggccaccattccttcttcc
gagtgcgctgacctcgtcaaccagctcaactggactgctgtgctcgataggtttctgcag
gttactccatcttcctcgcaagacgagagtttacttctggaagtgctacgcttcatgaac
agcatcatccaactgtcagcctccattcctgatgagatggctcagtggttggcccagcgg
ctctacgacggcacagggcccttggtcgggctgctgaatcgcacacctggtggaggggag
ggggatgaggtggctgacgcctccaccattgtcaagaggtcactggacaaggtgttgcta
aagtttatttccaccttcatctcacgcctgccttacaaacttcacaccagattgagcgtg
gcacagtctcgaggagacctggctcgtcgactgctgctgcgtctgaacatctccgctgca
cctcacttctacaacctggccgccctggaggggacccttctctgcctcatgcacctcact
gcacggccgggatggagcgcagagagtggagatatggaaccaactgcgcagtgttcacac
gtcctcaactgtttgttggaggtggtgtcagcctttcacatcgggcgtggcagtacctcc
atgtcctacatggggaggggagtgaccaaggcagccaccctgtgtctacgtcacctggcg
catgaaatggtctcttgcactgacgacaaggaatgggccaagaactggttgtactcacgt
caaggggcagatgctgtggctgagcctggtctcaactggatgctgacgctctgggcctat
agggatgctgaggtgcgtgcggcaggactgggtattgccgtagcactgacatccacagag
gttgggcgagtgctggtgaccaacaactgtaagcacatacctgggggcatctggggggct
gccttcagcgtgctgcttgacccctctgagtgcagcatcgtcaggcaacaggctgcactg
ttgctggtcaacctgacgtccgagaccatccccagcaccacgggggacgccacgtcggcc
tctgtgtggcagggaccggttgtcacagatgtggactccaacgtgtctctggtgggtcta
aatgcactgctagccctgctgcaccacagtcatttctacccgcagctgtcggccatgttg
tcgtccttcttcccctccaccgtcctgcagccggtgctggtcaccactgaggtccccctg
cactcactggacagctcgcagaccaccgtcacctccacagagggcagcaccactccaaga
ggcagagactttctaggacagccatcactgcacaccacagaccaggaagggggtgctacc
tctgccaggagcacagggcggtcaaactacacaagggtcagccagcaggacagccaggtc
tcggtcaccagcagcagttcagggaccacaagaacaggtcttcagttggactcctccgct
gccccctcatctcaggatggtggtgctggaggtgacgagaaagggatgacgactgtggtg
accccgtgtctggttgctgctgtcagtcagttgctaggaaacctggttgtcatggcgcca
catgacaccttcaacagcctggccagccataatgtcatcaacactcttctcaacatgatc
gacacgtcactgctgcaggacctgtgtcgtcagctcacttcagggccccatcgtagcggc
agcatgctgaccttgcgcgacctcttgcgcatgtacaatgccattgtctcccttgtggcc
accagcgtcaagttaaactcccccaccagggcggcgctcctgggaaacaaggtggcgctg
aaagcaatcgcttcactcatgctcctgcagtgtgacagtgccggtgatctggtactggag
tgtcgacagctgtggctgtcagtgttacggttgctgtgcactctcctgcaaacacaaagt
gcggccgctctgctgagtctgactgatgtcctggcttccatctggattgatttctgtgac
gcccttgttcacctggtggaggtgcgatcaggcgagacacaggccctgttcaccaccgtg
acctccttcttgtccctgctgctgacggaggaggccaagcttgtttgcagagacccccag
cgctgcgacgacacggccactctcacacactgtctggacgtcagcaaggccaagaacaag
cctgcagtggaaaaaggaaaagacactgggacgtttaccaccggctcttccctcagcaaa
gttcttgttggcacttacgagctgacctccgggtcaacggtggggtcaaagggcagggtc
agtggagatgcccaacaggtcatcaacacactcaagtcactgctggctgtgagtcagtca
gcaaaacacactgcacttgacatgggtttggtggagacactgctagagacgatgaaacaa
acgcacgcccgcctcagcctggactccctgcaagtgggaaagacctccaggagaaaggac
gagggactgctgcaggagctcatcctgaccatgaacattctgcgcaacctgctgtgtggc
aatgagaatgtgaagctggcgtgcatgcacagtggcctggcaggggtggttcacaagctg
tgggcgtggtgcctgcaggattatagtctcatgtccgccgccctggctcttctccttaat
ttcacggccaagtgtcctgcagcggcaacctccatagcatcaacagtctccggggcggtg
ggaccgagcgccagtcgccagcagcagatcagcagttctctggttctggccatcgtcaag
gcaacgcagagagagattgacagagacatgatgccttcgtcggccgtggggccagggccg
tcagtgtcccacctcaagctgttgttttccttactcacttctttgtctctgtcatctgag
tgtcgcacacttctgtggaagagcacctttcttcaggatttctccaagctgtcgcctagt
cgcagccgcaagtcacgcagcaggcaggttctggacgccctgtggtttgagctggccgtg
gggttatcgttctcctctgatggccagcagatgcttcttcgcattaatgagtgcctgaca
gtgttgctggatttcgtggagaacggtggggggtcccctcactgccaggagtatgccatg
ctggttctgcgcaacatgtgttgtcacgctaccaacaagccaaaactccttgccaatgag
aacgtgattcctagctgtgtggatctggtggagtcggcagagagcagtagactgcagatc
ctggccgcctcagcgttgtgggccctggcttacaacaaccacaaggccaagatggccatg
aaaggcgtcaacgtgatcccacggatgcgagcgtgtctgaagaacgtccagaaccttgga
cacagcatggaagacgtgcagtgctcagagaacatccaggcggtcatctccaccgtcagc
acgtag
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