Littorina saxatilis: 138962092
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Entry
138962092 CDS
T10665
Name
(RefSeq) nucleoporin Nup43-like isoform X1
KO
K14305
nuclear pore complex protein Nup43
Organism
lsax Littorina saxatilis
Pathway
lsax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138962092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138962092
03036 Chromosome and associated proteins [BR:
lsax03036
]
138962092
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138962092
Chromosome and associated proteins [BR:
lsax03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
138962092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR75_2nd
WD40_Gbeta
WD40_RFWD3
EIF3I
MIOS_WD40
WD_LRWD1
WD40_CFAP43
Beta-prop_WDR41
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
138962092
NCBI-ProteinID:
XP_070189904
LinkDB
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Position
LG3:29764984..29781100
Genome browser
AA seq
369 aa
AA seq
DB search
MEQPRINVKFVSQKINKIRWRPRLKQSMQQSDTFVTGSWDDEENKVCLWRQQPLLDDGSR
NGMEEELLLREPELLCEARHPGDVSDLCFLTQDHIATASSTGSVLLYKHHTITQRVEAVQ
EWPDLHISGGRRCPCTCLATYGEDTMLSGGEDGRIAMLSPGQAAPVRVLEKADSCTINAL
AFLKQSEVLTVNSFGQLKLFDFRQNTDGPAQIFSATDDHWSLLCVDKHPGQLHVVATGSQ
DGTLTVWDLRQNRFPMTTLDAHQSSMWEVRFHPYHAEHLFTCSEDGSLWHWDASAHASLV
ASSGRPGGDEGPSGQQSPWLGLEASPKLEINSLICNKSLSVNSLDIEGGLLLCGTDSENI
YTLSMPHLS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggagcagccgcgaatcaacgtaaaattcgtttctcaaaagataaacaagatccgatgg
cgcccccgattgaaacagtcgatgcagcagtccgacacatttgtcaccggcagctgggat
gacgaggaaaacaaagtgtgcctgtggcgacaacagccactgctagatgatggtagcagg
aacgggatggaggaagagctgttgctacgggaaccagagcttctgtgtgaggccaggcac
cctggtgatgtctcagacttgtgtttcttgacacaagatcatattgctactgcatcatcc
acgggctctgtgcttctctacaaacatcataccataacacagcgggtggaagcagtacaa
gagtggccggatcttcacatcagcggagggagacgctgcccctgtacctgcctggcaacg
tacggtgaagacaccatgttgtctggcggagaggatggtcgcattgccatgttgtcgccg
ggacaagctgctcctgtcagagtgctggagaaagcggatagctgtacaatcaatgccttg
gccttcctaaaacaatcagaagtgctgacagtgaactcctttggtcagctgaaactattt
gacttcagacagaacacagatggaccagcacagattttctcagcgacagatgaccactgg
tcactgctgtgtgtggacaaacaccctggtcagcttcacgtggtggccacaggcagtcag
gacggcacgttgaccgtctgggacctgcgtcagaaccgatttcccatgaccaccctggat
gctcaccagtcgtccatgtgggaggttcgattccacccgtaccatgctgaacacctgttc
acctgctctgaggatggttccctgtggcactgggatgcctctgctcatgcttctttggtt
gcttccagcggtagaccaggtggtgacgagggaccttcaggccagcagagtccctggctg
ggactggaggcgtcacccaagctggagatcaactctctcatctgcaacaagtctctctcc
gtcaattccctggacattgagggcggccttctgctgtgtggaacagacagtgagaacatc
tacaccctcagcatgccccacctcagttga
DBGET
integrated database retrieval system