Littorina saxatilis: 138962483
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Entry
138962483 CDS
T10665
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
lsax Littorina saxatilis
Pathway
lsax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138962483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lsax03041
]
138962483
Spliceosome [BR:
lsax03041
]
Complex C
Other components
Step II factors
138962483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD40_RFWD3
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_NOL10_N
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
138962483
NCBI-ProteinID:
XP_070190427
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Position
LG3:complement(44974206..45010896)
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AA seq
572 aa
AA seq
DB search
MAGLLSLQNYDSGSEGSNDEKDEKSDGFNAHLQPVDKTKSIAANMMLMSAPEVESVADAS
GIRHIDPLKKEVTYNPKYEELFAPQVGPSNPNLTQQARAERNTLAGFAEPSHFNDFQFEN
QRRTFTSYGYALDPSVNDAIVDEKVVGDSGAAEELKGATVFETLAKKAEKRKREKNTDAG
DIDGYLGPWGKFKDEQTVMKPSEDEQKELDEILAKRNKAGRSTDEKPVEEKTTLHIKDSF
DYQGRSFLHPPQDVGVNLRSEEPPEKCFLPKKQIFTWTGHTKGVSAIRWFPRYAHLLLSC
SMDTKIKIWEVYNDRRCVRTYLGHKQAVRDIQFNNDGKEFLSCAYDRYCKLWDTETGQCK
ARFTSRKVPYCVRFHPDDDKQHLFVAGTSDKKIVCWDIRTEEIVQEYDRHLGAVNTITFV
DQNRRFVSTSDDKSLRVWEWDIPVDFKYIADPSMHSMPAVTLSPNGKWLACQSMDNKVCV
FDVLNRFKFMRKKTFKGHMVAGYACGIDFSPEMSYISCGDADGKVYVWDWKSTKLYNKFK
AHDDVCISVLWHPHETSKMATAGWDGVIKYWD
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcttgttgtctttacagaactacgatagtggatctgagggatctaacgacgaa
aaagatgaaaaaagtgatggcttcaacgctcatctccagcccgtggataagacaaagtca
atagcagctaatatgatgctaatgtctgcgccagaagtggaatcagtcgcagatgcaagt
ggtatccgacatatcgatccactgaagaaagaggtcacatacaatcctaaatatgaagaa
ctttttgcacctcaggtgggtccatctaaccctaaccttacacagcaagcaagggcagag
cgaaatacacttgcaggttttgcagaaccgtctcacttcaatgatttccagtttgaaaat
cagcggcgtactttcacaagctatggttatgcgttggatccaagcgtgaatgacgctata
gtggacgaaaaagttgttggcgattcaggggcagccgaggagttgaaaggtgcaacagtc
tttgagacattggccaagaaagctgaaaagcggaaacgagaaaagaacacagatgccggt
gatattgatggctaccttggaccctggggaaaattcaaggatgagcagacagttatgaaa
ccttcagaggatgaacagaaggagctggatgaaatactggccaagcgcaacaaagcaggt
cgttccacagatgagaagccagtggaggagaagacaactctgcacatcaaagattcattc
gactaccagggccgttccttcttgcaccctccgcaggatgttggtgtcaaccttcgttca
gaggagccgccagaaaagtgtttcctgcccaagaaacagatcttcacgtggacaggacac
accaagggggtctccgccattcgctggttccctcgctacgcccacctcctcttgtcctgt
agtatggacaccaagatcaagatctgggaggtgtacaatgaccggagatgtgtgcgaacc
tatcttggccacaaacaagctgtgcgagatatccagtttaacaatgatggcaaagagttc
ctcagctgtgcgtacgacagatactgcaaactctgggacactgagacaggccagtgcaag
gcccgtttcactagtcgcaaggttccttactgtgtccgctttcaccctgacgatgacaag
caacacctttttgtggctggaacatcagacaaaaagattgtttgttgggacatccgaaca
gaagagattgtgcaagagtacgacagacatttgggagcagtcaatacaatcacttttgtg
gatcagaatcgtcgctttgtttccacatctgatgacaaaagtctgcgtgtttgggaatgg
gatattcctgtggacttcaagtacatcgctgacccctccatgcactccatgcctgccgtc
acactctctcctaatggcaaatggctggcgtgccagtccatggacaacaaggtctgtgtg
tttgacgtcctcaacaggttcaagttcatgaggaagaagacattcaaaggacacatggtg
gcgggttatgcctgtggaattgacttctcgcctgagatgagctacatctcatgcggtgat
gcagacgggaaggtgtacgtgtgggactggaagagcaccaagctgtacaacaagttcaag
gctcacgacgacgtctgcatcagtgttctctggcacccccatgagacttccaagatggcc
accgctggctgggacggcgtcatcaaatactgggattaa
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