Littorina saxatilis: 138963252
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Entry
138963252 CDS
T10665
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
lsax Littorina saxatilis
Pathway
lsax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
138963252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lsax03400
]
138963252
DNA repair and recombination proteins [BR:
lsax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
138963252
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
138963252
NCBI-ProteinID:
XP_070191417
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Position
LG3:74773894..74818605
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AA seq
934 aa
AA seq
DB search
MIMALQPKQDLSIDAIQDSGFITFHRGLPEKPSTTLRVFDRNDYYTVHGQDAMFVAKEVF
KTTGVIKYLGSGSNKLESVALSKMNFESLVRDLLLVRQYRVEVYRNKAKTAKGHDWAIAF
KASPGNLTQFEDILFGNTDMSLSVGVVGIKLASDDGQRVVGVGYADATLRKFTVSEFADN
DQFSNLEALIVQLSPKEAVIVAGESTPDACKVKEVLGRSGILLTERKRADFASKDIVQDL
NRLLRFKKGDQNSSATLPEVDKTHAVCGLSAVIRYLELLSDEGNFGQFSLSPFDLAQYMK
LDAAAVRALNLLPSPTEGGNKNHSILGLLNCCRTPQGQRLLAQWVKQPLMDINKIEERLN
VVSIMLEDSGLRQTLQDEQLRRVPDLQRMAKKFQRRKATLQDCYRVYQAIDRMPYLVEAL
EGYTGQHKSLIMDVFSNPIKELLLDFAKFQEMVESTLDLSVVDQHEFVIKPDFDENLAAL
REKTNELEDSMKAQLNKVARDLGLEPNKTVKLENNNQLGFFFRVTRKDEKALRNNKNYRT
IDTNKNGVRFHNTAVRQFNEEYLQAKEDYNEQQKSVVTEIIGIAAGYAEPMLLLNDLIAQ
LDVLVSFAHVSAAAPIPFVRPTILPKGSGVLKLKEARHPCLEVQDDVSFIPNDGIFQKDD
QMFHIITGPNMGGKSTYIRSVGVAVLMAQLGCYVPCSEAEVSIVDCVLARVGAGDSQLKG
VSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIACFCLFA
THFHELTALADVVPTVNNLHVTALTSNDTLTLLYRVKPGVCDQSFGIHVAELAHFPKHVV
ECARQKANELEDYQSMSVSGTQLDGDEEPAVKKRKMAKEEGEDIIRSFLHKAKELAASDM
TAEQLYKEVQKLKAEVDAKENPFVKDVLARQAAA
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggcgctccagccgaaacaagatttatcaatcgatgccatccaagacagtgga
tttatcactttccacagaggattacctgagaaacccagcacaaccctgcgagtttttgac
agaaatgactactacacagtgcatggtcaggatgccatgttcgttgccaaggaagtgttc
aagacaaccggtgtcatcaagtacctgggctctgggagcaataagctggagtctgtggcg
ctgagcaagatgaactttgagtcgctggtgcgtgacttgctgttggtgcgccaatacaga
gtggaggtgtacagaaacaaggccaagacggccaaaggccatgactgggccatagctttc
aaggcttctccagggaacctcacccagtttgaagacattctgtttggcaacactgacatg
tcactatcagtgggtgttgttggcatcaaactggcatcagatgacggacagagggttgtg
ggagtgggatatgctgatgcaacactcagaaagtttaccgtcagcgagtttgctgataac
gaccagttctccaatttggaggcactgattgttcagctgagccccaaagaagccgtcatt
gtggcaggggaaagcactccagatgcctgcaaagtgaaagaggtgctggggaggagtggt
attctcttgacagaaagaaaaagagctgactttgccagcaaagacatcgtccaggacttg
aatcgtcttttgcgcttcaagaaaggagatcagaacagcagcgctacactccctgaggta
gacaaaacacacgctgtttgtggcctgtctgctgtcataaggtaccttgagctgctgtca
gacgaggggaactttggccagttctcactgtcgccctttgaccttgcgcagtacatgaag
ctggatgctgcggccgtcagggccctcaaccttctgccctcccccacagaagggggaaac
aagaaccacagcatcctgggtctgttgaactgttgtcgcacacctcagggccagcgactc
ttggctcagtgggtcaagcagcctctgatggacatcaacaagatcgaggaacgtctgaat
gtggtgtccatcatgctggaagattccggtctgcgccagacactgcaggatgaacagttg
cgcagagtaccagacctgcagaggatggccaagaaattccagcgccgaaaagcaaccctc
caggactgttaccgtgtgtaccaagcaatcgacagaatgccgtacctggtggaggcactg
gagggctacacggggcagcacaagtctctcatcatggacgtcttcagcaaccctatcaag
gagctgctgttggactttgccaagttccaagaaatggtggagagcactttggacctcagt
gtggtggaccagcatgagtttgtcatcaagccagactttgatgaaaacctggctgctttg
agggagaaaacaaatgaacttgaagacagcatgaaggctcagttgaacaaagtggcgcgg
gaccttggtctggaacccaacaagacggtgaagctggaaaacaacaaccagctgggcttt
ttcttcagggtcacaagaaaggatgagaaggcgctgcggaacaacaagaactaccgcacc
attgacaccaacaagaacggggttcgattccacaacaccgcagtgcgtcagttcaacgag
gaatacctgcaggccaaggaagactacaatgagcagcagaagagtgttgtcacggagatc
attggtattgctgctggttatgcagaacccatgctcctgttgaacgacctgatagctcag
ctggacgtgctggtcagttttgcccatgtgtcggcggctgcccccattccgtttgtgcgg
ccaaccatcttgcccaaaggttctggtgtgctcaagctgaaggaagcgcgacacccatgc
ttggaggttcaggatgatgtctccttcattcctaatgacggcatctttcagaaagatgac
cagatgttccacatcatcacaggcccaaacatgggaggaaagtcaacctacatcagatct
gttggagtggcggttctgatggcacaactgggctgttacgttccctgctcagaggcagaa
gtgagcattgtggactgcgtactggcgcgtgttggggccggagacagtcagctgaagggc
gtatccactttcatggcagaaatgctggaaacagcgtccattctaaggtctgccacaaag
gattctctgatcatcattgacgagctggggagaggtacatcaacctacgatggctttggt
ctggcctgggcaatatctgagtacatagccacgaagatcgcgtgtttctgtctgttcgcc
actcacttccatgagctgacagcactggctgatgtggtacctaccgtcaacaacctgcat
gtcacggccttgacctctaacgacaccctgacattgctctacagggttaagccaggtgtt
tgtgatcagagctttggaattcacgtggctgagctggcccactttcccaaacatgttgta
gagtgtgcacgccagaaagccaacgagctggaggattaccagagcatgagtgtgtcggga
acacagcttgacggggacgaggagccagccgtcaagaaacgcaaaatggccaaagaggaa
ggtgaagacattatacggtcgtttctgcacaaggccaaggaactagcagcgtctgacatg
acggccgaacagctgtataaagaggtgcagaaactcaaggcagaggttgacgccaaagag
aatccctttgtcaaagatgtgcttgccaggcaggctgctgcttag
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