Littorina saxatilis: 138964872 Help Entry 138964872         CDS       T10665                                  Name (RefSeq) uncharacterized protein   KO K12818   ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6] Organism lsax  Littorina saxatilis Pathway lsax03040   Spliceosome Brite Enzymes [BR:lsax01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      138964872 Spliceosome [BR:lsax03041]  Complex C   Other components    Step II factors     138964872 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  KH_DEAH11 Helicase_C IBR DEAD OB_NTP_bind IBR_1 RRM_1 RRM_DEAH11 Helicase_RecD AAA_22 KH_DEAH11_2nd AAA_19 IBR_2 FYVE RRM_3 Zf-C2H2_ZNF451_2nd KH_DEAH11_1st DUF87 TolA_bind_tri Nsp1_C Motif Other DBs NCBI-GeneID:  138964872 NCBI-ProteinID:  XP_070193038 LinkDB All DBs Position LG4:complement(45462095..45473548) Genome browser AA seq 1727 aa AA seqDB search MSFPRRNTARTLSDGDELRQDLQENPNQPHRENKNDPETQARQRTRKPPHTVPARKKLAP QQTNVYVRIHDVIRDIRVLSDVLTAKVNMPGVELTPTETCIRHSDVFTFCTLTCNSKIMA KKLRNLILKDRTRFTPLIDCSFDDFLPAELHRQNTEKAKRELRRVIEREFDARSEQVVRA HNQKLIETQEKIDKAKEKLSDLYTAKNTLEEIAALEHKLEELQRQKREFNAALDGFRQKL DTLLQGDNYEKEGQALRKQLGVECCRLEKALPMYARRQEVVELVRQNPVSVLLAETGSGK STQVVQYLLEAGLADRGAIVCTQPRKVAASSLATHVAQELATNVGKDVGYKVGSRAKTSP STKVMYMTDHALLNECLTDPDLKAFSCVVVDEAHERSLFTDILLTMVKRCMARRPDLRVI ITSATIDPQVFVRFFGNNCPVLRVSGRAFPVDVVWQDSVSEEENDFGNYTEAAVNKAVEI HEKEPPGDILVFLTSAVEIQRCCDTFQQRMADRTDFKCLQLHGQLQADEQQKVFEPLERN KRKIVFATNCAETSITIDGIKYVVDTGVAKEMRYDPKRNLRSLNVTVISQSSAEQRKGRA GRTAPGKCYRLYSQHSFQAMDVISLPEILKTHLGHALLKLAELGVTPDMYDFVQSPSQEA IDAALKTLHQLGAMQENVITDKGRWIARLPFDPKLGLMTLHGRDCGLLFDAIVLAALVSA GSGLFYRGVTEAEHANLDKAKLTFSHNGGDSLTSLEVFKAWQGVEEKQKNKWCVENSINV KVIRGVRDTVNDVCKLLKNDLELQVTHKLSEDTGTLDALKKMLFICNAQNLCHFLGREKA GYFAAQASKRVFFHPSSALCSLGSYPEWVVFDQLLQTSRDFITGITPVDDSLVRQLKKEH FGFDAEEVRKKTLQNVFTQAAGSHAFFAVVGPRFTNIKELQETIASAESSSVIVLEASRE TGEVKVFSTDMTDSVKTLENKLRQTIDTAVKDLQREVQEVSVGSEQSGVRVLLGQGAQIT DILMPHETRKVFISSPSNDLTEEAIKQKFQAYGEISYCRKFQGGKNWGCVVFRTTAEAAA AVKGSKDDDHDVAELEHRRLTKYNAEFKARLSWNRRRAKGFGFVAVSPAYISKCLAISNV YIGGNLVRVKINKKDENSLYLTQLPAEVTEDLIKRTVLHTIGESEDAPDIVESVSVPRQT LGRTDKQELKRFEDQIKAKIERHLTASRVTVTVFSPKTEKTAMFLGEARFSDPIEGLEAC RALRVDFTLGGAKVEVEPIISATLRVPQPVYDVCKTELDDLIARQLADMDVEVTVKELAG NNRLICLKADDMSDLVQARSFLSDVIRGDVLECKDIPALGNLLTSAGRQMLKEAEKETSA YVSVDNRLRTVSIHGSPQACTKVSLKINSYLNDTILGTGEEIMLRGDGRSPGLLKTLHVK HGEDLDGLRQATGLLSIDVDYRRHKLKLRGPPGSIEKAKQVVEESDQALKASSTRSADQE DDSIDCAACFCPIDKGDLYRLEVCAHALCKGCIVRQVSIAIKDHIFPVTCCQDGCDLPLA WRDFYTLSRLGHIKIPALATSALSHFVLANRDKARFCTTPDCPMVYRVTSESSADVFLCP ECKSRTCTACHQQAHDGMSCSMLRSCKEPGEGIEDWVKKDPKNRRGCPGCKSPIEKISGC NKMHCTACGAVFCWVCTKKFPTEKQCYDHLARDHNGIFGQEFVLHYQ NT seq 5184 nt NT seq  +upstreamnt  +downstreamnt atgtcttttcctcgccgtaacacagcaagaactttgtcggacggagacgaattacgacaa gacctgcaagaaaacccaaaccagccacacagggaaaataaaaatgatcctgaaacacag gcaagacaaaggacaagaaaacctccacacactgttcccgcacgcaagaagcttgcccct cagcaaacgaacgtttacgtcagaattcatgacgtcatccgtgacatacgggtcctgagt gacgtgctgactgcaaaagtgaacatgccaggcgtggaactgaccccgacagagacgtgc atcagacacagcgacgtgttcactttctgcacactcacctgcaatagcaagatcatggcc aagaaactcaggaacctcatcctcaaggacagaacgcgcttcacgcccctcatagattgc agcttcgacgacttcctacctgctgagctacatcgccagaacacggaaaaggcgaagaga gaactgaggagagtaatagagcgcgagttcgacgccaggtcagaacaggtagtgcgcgcc cacaatcagaagctaatcgaaacgcaggagaagatcgacaaagccaaagagaagttgtct gacttgtacacagcaaagaacacgctcgaagagatcgctgccctggaacacaaactggaa gaactccagagacagaagagagagttcaacgcagccttggacggttttcgacaaaaactc gacactcttctgcaaggagacaactacgagaaggaaggccaggcattacgaaagcagctc ggggtggagtgctgcaggctggaaaaggccctgcccatgtacgctcgtcgtcaggaagtc gtagaactggtgcggcaaaatcctgtgtccgtcctgctggcagagacagggtccggcaag tccactcaagtggtgcagtatttgctcgaagctggccttgctgaccgaggcgccatcgtg tgcacccagccccgtaaagtggccgcctcttccctggcgacacacgtggcacaggagctt gccaccaacgtggggaaggacgtgggctacaaggtaggcagcagagcgaagacctccccc tccaccaaagtgatgtacatgacggaccacgcactgctgaacgagtgcctgacggaccca gacctcaaggcgttttcgtgtgtcgtggtggacgaggctcatgagcggagtctctttacc gacatcctgctgaccatggtcaagagatgcatggcgagaaggcccgacctcagagtcatc atcacctctgccactattgatccacaagtcttcgttcgtttctttggtaacaactgtcct gtcctgcgcgtgagtggcagggcctttccggtggatgtggtgtggcaagactctgtcagc gaggaagagaacgactttgggaattacacggaggctgccgtcaacaaagctgtagaaata cacgagaaagagccaccaggagatatcttggtcttcctcacatcagccgtggagatccag agatgctgcgacacatttcagcagaggatggcagaccgtacagacttcaagtgccttcaa ctgcacgggcagctacaggctgacgagcaacagaaggtttttgaacccttggagaggaac aagagaaagatcgtgttcgccaccaactgcgcggagacctccatcaccatcgacggcatc aagtacgtagtggacaccggcgttgccaaggagatgcgttacgaccccaagaggaacctg cgatctctcaacgtcaccgtgataagtcagagctctgcggaacagaggaagggcagggcg ggaagaaccgctccgggaaagtgctacaggctgtactcccagcacagcttccaggccatg gatgtcatcagcctgcctgaaatcctcaagactcaccttggtcatgctctgctaaagctt gcggagctcggtgtcacgcctgacatgtacgattttgtgcagtcgccgagccaggaagcc atagatgctgctttgaagaccctgcatcagctgggggccatgcaggagaacgtcatcact gacaaaggaagatggattgctaggctgcccttcgatccaaagcttggactaatgacattg cacggtcgcgactgtggtctgctctttgatgctattgttcttgccgcccttgtaagtgcc ggtagcggtctgttttacagaggcgtgacggaggcagagcacgccaatctagataaagcc aagctgacgttcagccacaatggtggcgacagtctgacgtcactggaggtcttcaaggca tggcagggggtagaggagaagcagaaaaacaagtggtgcgttgaaaactcgatcaacgtc aaggtcatccgaggtgtcagggacacggtcaatgacgtatgcaagctgctgaagaacgac ctggagttgcaggtgacccacaaactctccgaggacacaggcacactggatgcgttgaaa aagatgctgttcatttgcaatgcacaaaacctctgtcatttccttgggcgagaaaaagct ggctactttgctgcccaggcttccaaacgggttttcttccacccgtcctcagcgctctgc tccctgggtagctacccggaatgggtggtcttcgaccagctactgcagacctcacgtgac ttcatcactggcatcacgcctgtagatgactccctggtcaggcagcttaagaaagagcac tttgggtttgacgcagaggaagtccggaagaagacactgcaaaacgtcttcacgcaagct gctggttcgcatgccttctttgctgtagtcggtccccgcttcacgaacatcaaggagctt caagaaaccattgcttccgcagaatcatcttcagtcattgtcctggaggccagtcgggaa acaggcgaggtgaaagtattcagcactgatatgactgacagcgtgaaaacccttgagaac aagctgaggcagacgattgacaccgctgtgaaggatctgcagcgagaggtccaagaggta tctgtaggatctgaacagtcaggcgtccgtgttctactgggccagggagcacagatcaca gacatcctcatgccgcatgagaccaggaaggtcttcatctcaagtccctccaatgatctc acagaagaagccatcaagcaaaagtttcaggcgtatggagagatcagttactgccgcaag tttcagggcgggaagaactggggctgcgtggtgttcaggacaacggctgaggctgccgct gcggtaaaaggttccaaagatgacgatcacgacgtggctgaactagaacaccgccgtctg accaagtacaacgctgagttcaaggctcgtctgtcttggaaccgccgccgagctaagggc tttgggtttgttgctgtctctccagcctacatctccaagtgtctcgccataagcaacgtg tacatcggagggaacctcgttcgtgtcaagatcaataagaaggacgaaaacagtttgtac ctgactcaactgcctgctgaggtgaccgaggacctcatcaaacgcaccgtcctgcacacg atcggcgagagcgaggatgcgcccgacatcgtggagagtgtttcagtccccagacaaacc ctcggtagaactgacaagcaggaactcaaacggtttgaagatcaaatcaaggccaagatt gaacgacatttgactgcttcgagagtgaccgtcacggtcttctcgccaaagacggagaag acggctatgtttctgggcgaggctcgcttcagcgaccccattgaaggcctggaagcttgc agagctcttcgagttgatttcacgctgggaggcgcaaaggttgaggtagagcccatcatc tccgccaccctgcgagttcctcagcctgtgtatgacgtctgcaaaactgagcttgatgat ctcattgctcgacaactggctgacatggacgtagaggtaaccgtgaaggaactggcaggc aacaaccgactcatctgtctcaaagccgatgatatgtctgatctggtccaggccagatcc tttctcagcgatgtcatcagaggcgacgtcctggagtgcaaagacattccggctttgggt aatctgctgacgtcagccggacgtcagatgctgaaagaggccgagaaggagacgtcagct tatgtcagcgttgacaatcgtctgaggaccgtctccattcacggctccccgcaagcttgc acaaaagtgagtctgaagatcaacagctacctgaacgacacgattttaggaacgggggag gagatcatgctccgaggagacgggagatccccaggactgctgaagacgctgcacgtgaaa cacggggaagatctcgatgggctgcgtcaggcgacaggccttctcagtattgacgtcgac tatcgtagacacaaactgaagctgaggggcccaccagggagtatcgaaaaagccaagcaa gtggtggaagagtcggaccaggctctgaaggcatccagtacccgaagtgctgatcaagaa gacgacagcattgactgtgccgcctgcttctgtcccatcgacaaaggagatttgtatcgc cttgaagtctgcgctcatgctctctgcaaaggctgtattgtgcgtcaggtgagcattgcc atcaaggaccacatcttccctgtcacttgctgccaggatggttgtgaccttccccttgcc tggcgggacttctacactctgtcgcgtctcggtcacatcaaaatccccgccctcgccact tccgccctctcccattttgttctggccaatcgcgacaaggctcgattctgcaccacgccc gactgtccaatggtgtaccgcgttacaagcgagagcagcgcagatgtcttcctgtgccca gaatgcaaatcgcgaacgtgcacagcatgtcaccagcaagctcacgatggaatgtcgtgc agtatgctgcgcagttgcaaagaacccggcgaagggatcgaagactgggtgaagaaggac ccgaaaaaccgaagaggctgcccaggctgtaagagccccattgaaaagatatcgggctgt aacaagatgcactgcacagcgtgcggtgcagttttttgttgggtgtgcactaaaaagttt ccgacggagaaacaatgttacgatcatctggccagagatcacaatggtatttttggtcag gagttcgtgttgcactatcaatga

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