Littorina saxatilis: 138964994
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Entry
138964994 CDS
T10665
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
lsax Littorina saxatilis
Pathway
lsax03018
RNA degradation
lsax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138964994
09123 Folding, sorting and degradation
03018 RNA degradation
138964994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138964994
03041 Spliceosome [BR:
lsax03041
]
138964994
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138964994
mRNA degradation factors
5'-3' decay
Lsm complex
138964994
Spliceosome [BR:
lsax03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
138964994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
138964994
NCBI-ProteinID:
XP_070193217
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All DBs
Position
LG4:complement(49972671..49981154)
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AA seq
96 aa
AA seq
DB search
MASALESYVNKTVSIVTADGRIIVGTLKGFDQTINLILDDSHERVFSTSQGMEQVILGLY
IVRGDNVAVIGEVDDDTDGRVDFDNIRAEPLNAVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcgctggaaagctacgtcaacaaaactgtctccattgtgactgctgatggg
aggatcatagtgggaaccctgaaaggttttgaccagacgatcaacctgatcttggatgac
agtcatgagcgagtgttcagcacctcacaagggatggaacaagtcattttggggctgtac
attgttcgtggagacaatgttgctgtgattggagaagtggacgatgataccgacggcaga
gtggattttgacaacattcgagctgaacctctcaacgctgttgcccattga
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