Littorina saxatilis: 138965800
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Entry
138965800 CDS
T10665
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
lsax Littorina saxatilis
Pathway
lsax03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
138965800
mRNA degradation factors
5'-3' decay
Decapping complex
138965800
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138965800
NCBI-ProteinID:
XP_070194004
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Position
LG1:complement(27090903..27143315)
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AA seq
1431 aa
AA seq
DB search
MSNEDGAASSMNSTDTSQLLRELQALQANGSSASFSGTGNSGEIGGSGDATISQLMQTIY
SSEPKQKIVFSGSSEQEHSFSVYGREVDIYIASGEDSPRASSNKVKITPMVNHAWEQRYY
YGNLVAAHRDGDFVAFALKGKSGGNVRILNRRTAERALLKGFAGSVEDVAFAHSEDVIIA
AVDERGNVFVYTCEIAQDGKIVTTPLLHLEQQVDKHSAYHRVLWCPYWPEEGEEGESPVQ
DSSKVLAYTQGEKIELLAVDLVTRDYGSGPLNPADIETGRISLVCHSEPIVDAVFSPDGS
ALATASLDGYVKFFQIDWETSEQSSEPPKCLHQWQPHNGQPLSFFAFLDDLKNMSPDAQF
WKFAVTGSSRNQELKVWSCETWSCLQTVRFLQPPESDQSECLTLKVCIDASARYLVLSDK
LNVVVYVLQIHQDVVAGTAHISSVSEFPLTQPCLSFAILEACTKRFKLSPNDSHLDEITT
GELELERERHQSQNDDEAKTSTTGVQIRLYAIHTKALQELLIRYRPEVSVSVLGSAGSAS
HDGTSLRDGLSDMSVGGETSFAESEVTGDDLPAAPVPPTLPPKLLSPEAFTVSASSKMPS
PSGANTTNEDVLSSTSSFTHVTGLTGQNAEDLLLSPASSIDHSTSVAALTPKSATSGQSS
KPAVLTPMSAGSVLSPSSLFTPPPQRERLRHEEHDDDVTPTNIPLPPEEEDELATPKSSH
QSNESSQMEALEAFFKPPATSTASSLPPGDTPLVTGTFDVEGGTQKSTVSGATQQGSSGA
RDTYDENDQEVAEVLGEDLDKSFSSAASGATGGAPAEYPLDHAEEEDRPHKPWPRPPAVP
VGQAVPIVPAAVPQVVDEAVLAHTDADDDFSEDQNEAEVEEEIEEVIETADDDDDDDDDD
DDDDDDDEDEEEEEDSSRHYGKSYRDGRNRGAAGHGPVQIIREIMDPSMMSGLRDSIGKL
SAEVSRQQKELCRLQQQLLEQHELQVDLQRQQLEQATLRGAAQPTQDLEQQLGRIQNVVA
SRVERTLSTALQRETRLLHDKLSSNETRQVAAQESLQKGMTQAMSLAAQKSLETVVKNEF
KQTVTPTVTRAVEQMKNQLHTEMSQKMTATDSVIKDQIGKIVRSRQTTDAIGQAAGSAMH
SHMQGMFRDVFQSRVIPAFEHSTQTMINQVNTAFQEGTKEYQGHLRKQLEKVRQEQLSMR
DPVVQQLTELVESFKQNSQHLQQQVVQAVRSETSNQVKASLNSFQEQVTMGIRSVIREEV
AVALRDQGSKMTDSLASYLRSGAGTPVPGAHTPDMNFVQAQQEQIRLLVGRGKLNDAFQT
ALSASNLELVLYVCELVNPAQMFNQNPCPLSQPVLLSLIQQLSAELASSFATKIKYLTEA
VTNMDSSDPVTREHVPAILEGLITKLRTYQASNPPNKDVKLLLMAATSLSR
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgaggatggagctgcctcgtcaatgaatagcactgacacaagccagctcttg
cgcgagctacaagctctgcaggcaaatggctcaagtgcaagtttttctgggacaggcaac
tctggagaaattggagggtcaggagatgcaacgatcagccagctgatgcaaactatctac
agctcagagcctaagcaaaaaatagttttctctggcagcagtgagcaagagcatagtttc
agtgtgtatggccgagaagttgatatatacatcgcttctggggaggacagtcctcgtgca
agcagcaacaaggtgaagataactccgatggtgaaccatgcctgggaacaacgctattat
tacggcaacctagttgcagcacaccgtgatggtgattttgtagctttcgctctcaagggc
aaatcagggggcaatgtgcgcatactcaatcgccgaactgcagaaagagcattgctaaaa
ggattcgctgggagcgtggaggatgtagcttttgcacacagcgaagacgtcatcatcgct
gctgtggacgaaaggggcaacgtgtttgtctacacctgtgagattgctcaggatggcaag
attgtcaccacccctctcttgcacctggaacaacaggtggacaaacactcggcctaccac
cgcgtcctctggtgcccttactggccggaggagggggaggagggagagagtccagtgcag
gattcctccaaagtccttgcatacacccagggggaaaagattgagctgttggctgtggac
cttgtgacgcgggactacggctctggacccctcaaccctgcggacattgagacagggaga
atctcacttgtctgccacagtgagcctatcgtagatgcagttttctcccctgatggttct
gctctggctacagcctcattagacggatacgtcaagttcttccagattgactgggaaaca
tcggagcagtcgtctgagcctccaaagtgtctgcaccagtggcagccacacaacggccag
cctctgtcgttctttgctttcctggatgacctgaagaacatgagccctgatgctcagttc
tggaagtttgctgtcactggcagcagtagaaaccaggaactgaaagtgtggagctgtgaa
acatggagctgcttgcaaactgtcagatttctgcagccccctgaaagtgatcagagtgaa
tgtctgacactgaaagtctgtatcgatgcaagtgccagatatcttgtgctctctgacaag
ctgaatgtggtggtgtacgtgctacagattcaccaggacgtggtggccggcacagctcac
atcagctctgtgtccgaattccctctcacccagccttgtctcagttttgctattctggag
gcttgcaccaagaggttcaaactgtcccctaacgactcccacctggatgagatcacaaca
ggtgaactggaattggaacgcgagagacatcagtctcagaacgatgatgaagcaaagaca
tccactactggggtgcagattcgactctatgcaatccataccaaagctttacaagaattg
ctgattcgctatcgccccgaagtatctgtgtcagtgctgggttctgctgggtccgcgtct
catgatggaacaagtttacgtgatggtttgtcagacatgagcgtgggaggggagacaagt
tttgcagagagcgaggtgacgggggacgatctgcctgcagcccctgttccccccacactg
ccccccaaactgctctcacctgaggccttcactgtgtcagcctcaagtaagatgccatcc
ccttcaggagccaacacgacaaacgaagacgtcctctccagcaccagcagcttcactcac
gtcaccggactcaccggtcaaaacgcagaagaccttctcctgtcaccggccagctctatt
gaccactccacgtctgttgccgccctcacgcccaagtcggccacctctgggcagtcttcc
aagcccgcggttttgacgcccatgtcagcgggttctgtgttgtcgccgagttcactgttc
acaccaccgccacagcgagagaggttgaggcatgaggaacacgatgatgatgtgacgccc
accaacatccccctgccacctgaagaggaggacgagttagccacacccaagagctcgcac
cagagtaatgagtcttcacagatggaggccctggaagccttcttcaaaccaccggcgact
tccacagcatcttctctgcccccaggggacacaccccttgttactggaacctttgacgtg
gaggggggaacccagaaatcaacggtttctggggcaacccagcaaggatcctccggggct
cgtgacacctatgacgagaatgaccaggaggtggcagaggttttgggtgaagatctggac
aagtcgttctccagtgcagcaagcggggccacgggcggggctcctgccgagtacccactg
gatcatgccgaggaggaggaccgtccacacaaaccttggccccgcccacctgccgtgccc
gtgggtcaggctgttcctattgttccggcggctgtaccacaagttgtggatgaagcagta
ctggctcacactgatgctgatgacgacttttccgaagaccagaatgaagcagaggtggaa
gaggagattgaggaggtcatagagacagctgacgatgacgacgatgatgatgatgacgac
gatgatgatgacgacgatgatgaagatgaggaggaggaagaagacagcagcaggcactat
gggaagtcgtaccgagacgggaggaaccgaggtgccgccggtcacggtccagtgcagatc
atccgggagatcatggatcctagcatgatgtcagggttacgggacagtatcggcaagctg
agtgcagaggttagccgacaacagaaagagctgtgccgtctgcagcagcagttacttgaa
cagcacgagctgcaagtggacctgcagcgacagcagttggagcaggccacactgcgcggt
gctgcgcagcccacccaagacctggagcagcagctgggaagaatccagaatgttgtggct
tctagggtggagcgtactctgtcgaccgccttgcaaagagaaaccagactcctgcatgac
aaactgtcatccaatgaaacccggcaggtggcagcacaagagtcgttgcaaaagggcatg
acacaggcaatgagcttggcagctcagaagtccttggaaactgttgtgaagaatgagttc
aaacagactgttactcccactgtgacaagggcagtagaacagatgaagaaccagctacac
actgagatgtcccagaaaatgactgccacagattctgtcatcaaggatcagattggcaag
attgtacgatcgcggcaaacaacggatgccataggacaagcagcagggagcgcgatgcac
agtcacatgcagggcatgtttcgagacgtgttccagagccgcgtcatcccggccttcgaa
cactccacccagacaatgatcaaccaggtcaacacagccttccaggaaggaaccaaggaa
taccaaggccacctgaggaaacagctggagaaagtgaggcaagaacagttatccatgcgt
gaccccgtggttcagcaactgacagagctggtggaatcgttcaagcagaactctcagcat
ttacagcagcaggtggttcaggctgtacgcagtgagaccagcaaccaggtgaaagcgtcg
cttaacagttttcaagagcaggtcactatggggattcgctcagtgattcgtgaagaggtg
gcagtagcactccgggaccaggggtccaagatgacagacagcttggcctcgtacctccga
tcaggggcaggcactccagtccctggcgcacacacaccagacatgaactttgtgcaggcg
caacaagaacagatcaggttactggtcggcagaggaaagctcaacgacgccttccagacg
gccctgagtgcatccaacttggagctggttctgtacgtgtgtgagctggtaaacccggct
cagatgttcaaccagaacccatgtcctctctctcagcccgtgctcttgtcgctcattcag
caactgtctgctgagctcgcttcatcctttgccacaaaaattaaatacctgacggaagca
gtaaccaatatggactcctcggaccctgtgacaagagaacatgtgccagccattctagaa
ggcctcattaccaagcttaggacctaccaagcaagcaacccacccaacaaggatgtcaag
ttactcttaatggcggcaacttctctcagtagataa
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