Littorina saxatilis: 138966045
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Entry
138966045 CDS
T10665
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
lsax Littorina saxatilis
Pathway
lsax04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138966045
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lsax01009
]
138966045
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lsax04131
]
138966045
03029 Mitochondrial biogenesis [BR:
lsax03029
]
138966045
Protein phosphatases and associated proteins [BR:
lsax01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138966045
Membrane trafficking [BR:
lsax04131
]
Autophagy
Autophagosome formation proteins
ULK complex
138966045
Mitochondrial biogenesis [BR:
lsax03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
138966045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
ubiquitin
TBK1_ULD
DUF4988
Motif
Other DBs
NCBI-GeneID:
138966045
NCBI-ProteinID:
XP_070194234
LinkDB
All DBs
Position
LG5:complement(1746428..1803060)
Genome browser
AA seq
1477 aa
AA seq
DB search
MIHVFLVDAGTTYLVDVDLQHPVSHLNAEIARLSLIPVEKQVLLVSGGVPLFPDKPLFHY
EATLVDNPVYLICKTNIPNVTRPLSGSHSYSDRDLTSQVEASANMPAALETVRARTQLAQ
HICQIDRHELKSIEKLVFDQHLQQQGWAAVVANLEDLVSGFEKRANTFQRQFREFLKTRE
DILSLLRRMPDVLILLEKIPVLPCLESLASKTSVSLKGPLELLPSLCAGKLTLYIWMNSQ
DPKFRLEDVIRDLNTGTNQMGGELEERVSKEVQDVIKYASGPWPSEMKSIRGLEERLYGL
DKLVQSAKTTMDGQDNMTKGFELNWGRLQKDVKDTSILPDLCTSHRSQMKEMLGNHKKLL
ELKKKCADAKKELSDNLKQRLTWVMETHHLVNDMDNKLMLYYDWLNRIKRRTEFLQQVEQ
SPKVYAAMVVEVVRRQLFSQHYLKWAKGVAEESRKEHKKEMHRRKSFTRQFGSHFLQKLF
VGFRDNVPKFAAEAPKDVDSQLPEITPSDVHTLAENVPELRQQLRVPTGTGSPALASSLQ
QPLAADGGSDPLMIEVTQSLASSTASFITQSITSVTQSVSESVDTGQAHVLGPGERSRLS
LSYQEGEGERQDSEMLTDDQLFLSLQDKFPVPQCLSETLTAEVNSAAMSTISATAMSASP
KAQDLTSALEELGPQQQPQPQHPEGGGDGVLFSSGDLEPTKSSDSDAISHESLSERKPRT
KRQTGKGLSDTSPDAETSQEFTTADFYIEDSMPSSITDSPPKPRDSGKDRGEMNAALAEK
TKRVGELEGEVSALQAKLASQEEKLTSLQSMLNRDVVALRQNLAGIKECVRHSDGERVRV
VSGAQEAVVGVCASLVASVEREKEEVVDREREGSRRTVAGLEAQLQAKSKQVDELQQGML
KVSHGIADLNKELQQTRDSHQKETDALREKHTADLQEVTKKNILEVELETDRVRTELQQR
LDEWEAELQRLQEELQKSQSQLVQAQEEKERATEALQKEFCREKEELTESLKARHRQAIA
ELQTTFTQEERRKLESTQREHSERKDAEMQKRLQEVEATFEKRMQEKEDELFSKHSAQLE
SIESEWSMKLSAKESELHKEFEAKLEKTKEELQVRCAHPEVSEQAIQSGGGEVILLEQHQ
ELLQAAETGSREEVTQRFEKLLAEEREERDKALRAMEEQHQRDKEDALHSLKTKVAAERQ
IQFNEAITRAVQQKDMLIAELRDQADKLTSATGSDGSDGESKEQAQGIRKELEDIKEKES
HLKGEKRRLEDEVSLLQRQLRQYSEQLHSMTASTMPISPSLVTDSTYQQTGGLDEGGSRP
DWEQVAIVREQKINDLETKLMGMSMTTSIRREIRDKVSILTCNVGDLVLLCLDERHDQYV
VFTVGSTLHFLHSDCLEVLGLKSAEGEPRKNWVLAEVTEREYCQARKAQNRFKVPVNTKF
YRVKAKAWSPVGSLSSGGAAAAVTPDSPPSTPPPSSS
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atgatccacgtatttctggtagatgcagggaccacatatcttgtggatgtggatttacaa
catcctgtgtctcacctgaatgccgaaatagcacggctgagtctgatacctgtggagaaa
caggtgttgctggtcagtggaggggtgcccctctttccggacaaacccctttttcactat
gaggcgaccttggtggataatccagtgtacctcatatgcaaaaccaacatacccaatgtc
accagacccctctctggcagccattcttactcagaccgtgacctgaccagtcaggtggaa
gcgtcagccaacatgccagcagctctggagacggtcagagcacgcactcagcttgctcag
catatctgccagattgaccggcacgagctgaagtcgatagagaagctggtgttcgatcag
cacctccagcagcaaggctgggccgctgtcgtcgctaacctggaggatcttgtcagtggg
tttgagaagcgtgcaaacaccttccagcggcagttcagagaattcttgaagacgagggaa
gacatcttgtcgctgctgcggcggatgccagacgtgctgattctgctggagaagattccg
gtgctgccgtgtctggagagcctggcgtcaaagacctccgtcagcctcaagggacctctg
gaactgctgccgtcgctgtgtgctggcaaacttacactgtacatatggatgaattcacag
gaccccaagttccgcctggaagacgtcattcgagatctcaacactgggactaatcagatg
ggaggggagctggaggagagggtgtctaaggaggtacaggacgtcatcaagtacgcctca
ggcccgtggccctcggagatgaagagcatcagagggctggaggaacgtctgtacggcctg
gacaagctggtgcagtctgcaaagaccaccatggacgggcaggacaatatgacaaagggc
ttcgagctgaactggggtcggctgcagaaggatgtgaaggatacgagcatcctcccagac
ctgtgcacctcgcaccgctcgcagatgaaggagatgctgggtaaccacaagaagctgctg
gagctgaagaagaaatgtgccgacgccaagaaggagctctcggacaacttgaagcagagg
ctcacgtgggtgatggagactcatcacctggtgaacgacatggacaacaaactgatgctg
tactacgactggctgaaccgcatcaagcggcgcaccgagttcttgcagcaagtggagcag
tcgcctaaggtgtacgctgccatggtggtggaggtggtgcgcagacaactcttctcgcag
cattatttaaagtgggccaaaggagtggctgaggagtcgaggaaggagcataaaaaagaa
atgcatcgccgcaagtctttcaccagacaatttggatctcattttctacagaagcttttt
gttggattcagggataacgtcccaaagtttgcagcggaagccccaaaggatgtagacagc
cagctaccagaaatcacaccgtctgacgtccacaccttggcagagaatgtacctgaactt
agacagcagctgcgagtccccactgggacgggatccccagcgctggcgtcatcgctccaa
caacctctagcagccgacggagggtctgaccctctgatgatagaggtcacccagtcactg
gcgtccagcaccgcctccttcatcacccagtccatcacctccgtcacacagtctgtgtcc
gagtcggtggacacgggtcaagcgcatgtgctgggtcccggagaacgcagccgattgtcg
ctgagctaccaggagggggagggggagcggcaggattcggagatgctgacagacgaccag
ctgttcctgtcgctgcaggataagtttcctgttccccagtgtctgtcagagacactgact
gctgaggtcaactccgcagccatgagtactatctccgccactgccatgtcggcctcaccc
aaagcacaagacctcacgtccgctctggaagagttgggaccgcagcagcaaccacaacca
caacacccagaaggagggggtgatggggtcctgttctcctctggtgaccttgaacccaca
aaatcctcggacagtgacgccatcagccacgagagtctttcggagcgcaaaccccgaacc
aaacgacaaactggcaaaggtttgtcagacacatccccagacgctgagacctcgcaggag
ttcaccacagccgacttttacatcgaagactccatgccttcgtccatcaccgactcgccc
ccgaaacccagagactcggggaaagatcggggcgagatgaacgcagcgttggcagaaaag
acaaaacgtgtgggagaacttgagggagaagtaagtgccttgcaagccaagctggccagc
caagaggagaagcttaccagcctgcagtccatgctgaacagggatgtcgtggctctgcgg
cagaacttggcggggattaaagagtgtgtgcggcacagcgacggagagagagtgcgtgtg
gtctcgggggcccaggaagcggtggtgggggtgtgtgcgtccctggtggccagcgtggag
agggagaaggaggaggtggtggacagggagcgggagggcagcagacggacggtggcaggc
ctggaggcacagctacaagccaagagcaaacaggtggatgaattgcaacagggcatgctg
aaggtgtctcacggcatagcggacctcaacaaggagctgcagcagacgcgagacagccac
cagaaggagacggatgctctgagggagaagcacacggccgatctgcaggaggtcaccaag
aagaacatcctggaggtggagctggagacggatcgtgtgcgcacagagctgcagcagcga
ttggacgagtgggaggcggagctgcagcgactgcaagaagagctgcagaagtcgcagtct
caacttgtgcaggcacaagaggagaaagagcgagcaacagaggcactgcagaaagagttt
tgcagagaaaaggaggagctgaccgaatctctcaaggcacggcatcgtcaggcgatagcg
gaactacagaccaccttcacacaagaggaacgaaggaaactggaaagcacgcagagagaa
cacagtgagcgaaaagacgctgaaatgcagaaacgcctccaagaagtcgaggcgaccttt
gagaaacgtatgcaagaaaaggaagacgaactgttttcgaaacactcggcgcagttagaa
tctatagagagtgaatggtcgatgaaactgtcggccaaggaatcagagttgcacaaggag
tttgaagccaagctggaaaaaacaaaagaagagcttcaagtcagatgcgctcatcctgaa
gtgagcgagcaggcgatacagagtggtggaggggaggtcattctgttggagcagcatcag
gagttactgcaggcagcggagacagggtccagagaggaggtcactcaacgatttgaaaag
ctactggcagaggagagggaggagagagacaaggcgctgagggcgatggaggagcaacac
cagcgcgacaaggaggacgccttgcacagtctcaaaaccaaagtggccgctgagagacag
atccagtttaacgaagcgatcacgagagctgtgcagcagaaggacatgctgatcgcagag
ctgagagatcaggcggacaagttgacctcagccactggttcagatggttcagatggtgag
agcaaggagcaagctcaaggcatcaggaaagagttggaagacatcaaggaaaaagaatca
catctcaagggagaaaagcgacggcttgaagatgaggtgtcattgctacagcgacagctg
cgacaatacagcgaacagttacactccatgacggcatccaccatgccaatatcacccagc
ctggtcactgacagcacttatcagcaaaccggtgggttggatgaagggggatcaaggcca
gactgggaacaggtggccatcgttagggaacagaagattaatgacctggaaacaaaactg
atgggcatgtccatgacgactagcattcgcagagaaatacgcgacaaggtctcgatactt
acgtgcaacgtgggtgacctggtgttgctgtgtctggacgagcgacacgaccagtacgtt
gtgttcacggtgggctccacgcttcacttcttgcacagcgactgtctcgaggtgctgggg
ctcaaatcagcggagggagaaccaaggaagaactgggtgctggcagaggtcacggagaga
gaatactgccaagcaagaaaggctcagaatcggttcaaggtgccagtgaacaccaagttt
taccgtgtgaaggccaaggcatggtccccggtgggaagcctgtcgtctggaggagcagct
gcagcggtaacaccagactcaccaccatcaacaccaccaccctcctctagctga
DBGET
integrated database retrieval system
