Littorina saxatilis: 138966315
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Entry
138966315 CDS
T10665
Name
(RefSeq) nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
lsax Littorina saxatilis
Pathway
lsax03013
Nucleocytoplasmic transport
lsax03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138966315
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
138966315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsax03019
]
138966315
Messenger RNA biogenesis [BR:
lsax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
138966315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
Nup153
Motif
Other DBs
NCBI-GeneID:
138966315
NCBI-ProteinID:
XP_070194601
LinkDB
All DBs
Position
LG5:complement(12201195..12242953)
Genome browser
AA seq
1660 aa
AA seq
DB search
MASEGGGKIKSKRGNSTSKPYERRKSLFRRITDSIKDVLRPSWLPNDDNGDPSTSGRPGT
SSGDDGEEQFLSPPQSPSQLLGHNSQGLRPSERLYPQLPHPDSSHAPGNASVAWQQGASG
WQGQGQGTRSSTWGNNANTFDKSQFTPNYFGQKHMAGARQAGSMPEIAPSPRGLGGPAPI
TPSASSSTPTGHRRLVVPQSGVSSSSQRDDGQGRASAGPSFPPSASPSLNSEDNPTKRQR
LWSPEVLRRGTSLSATQQRLWSPERKGSLLQPAVKDKPAFKISVFSSPSLNESSHESSFY
SGRTTYGGASAYSRQSFNSSLPYQNSLPLRKSVKAKPLNNSGNAVLSSSATQILKTLERL
SDAKRSRANDTESESLLSFTPSSYRKASRPLQTSLPSRSLELPVRGPPTHQLNTPVAASI
AKNRQIISLPARRPNPPAASATCSKQDDRRQDVAHMDEGDEDVRVVRVEEKPAQARTTTT
SSSAVSEGPSSSRSSGKMKHPKSYDTRPKAAREEDEVVEIPNLRTDFTLPISAAGFSLGL
PTAPPPSYSSSYSSSYSSSTFSATYASTPFRSSGHSVATKTSTSMSIQSPPSVNAHFTFS
SPIQKSAPGRSGFSPASTEDFQFSSPLKVSDSIQASSYKSAMTSTIGSSPMSSQSGFTPA
AWGSTAPKPKSSFTGNAQASPVTSSYGGIMSPSSSSDRPVMATPELKFGSVMDILGGGNK
SPAKYSPSGSGFQPASQLKQGSVMDILGGKSTTTAASTLSGSGSTGGDSLFAKFTAPAGT
WDCDACMLQNKPDAAKCVACETPKPGTKQSAPFTASGSGSTSGDSLFAKFTAPAGTWDCD
ACMLQNKPDAAKCVACETPKPGSAPAKPSAPASDLMAKFRPPQGSWECDVCMVQNTGGDT
KCLACETPRPGTQATGSVPAPAAPAPGVVGPSGGLILSSIPTSSSGASPFLSAGTSGTES
STGFKFGAPPSSSSLPAAGGFMFGASSSSAAKAFGATSKDSSGTAGFKFGTGAAGTTDSS
TEKSKFETSSTGAKDTSGTAGFQFGSKDTSNSNSASSTAGFQFGAKDSTDTNGPLTSAGS
AVKLGAGADSKLTSSTATGSGFQFGAPSAPSGGGSGFVFGAPSKTSPAQDSASSTSASAL
PGGFSFKTPSEAGGAQTQGKDSSAKSVDKLTSPQETGNEGNAHSLFTPVFGVGKPSNNFS
MGAAPSLATGEANSVTGGFSFGATASRDSAAPSVFGSGLTSKVTFSGSDDSKAESRDSSA
KAPSLSGGFSFAAAAKTNNDTSAKPGLFSSLAPDSSSKNGPSSSVAAPASSGSAGFAFGG
NATTASPFGSGAQLGAGGFGSAPSAAKPVVNGEVAAPGMFAFGQQTSTSTAGFSFATPAA
NKDGVGNAPAPAKLPFAFGGADSGKSSGKRRLDNDLGPGEAKKSLFSMTGAPSLGEGEPF
KFSNTAPAAGGSGMFKFGQPSDGPAEKAPNITAFGGQASGFGSAGTPGGFSFSNPQTNAA
SSTGAPAPSLFGAGTGSTNTGQFSFSVGAGSQSNAAAASPFGSGASAPLASSQGAGGFNF
AGATQPSFNFGGANTAAPVFAFGVPSGEPAPAQPAPSGGVFAFGQTAPSADSTSSFSAPG
PNPAPNAMGFGAAPAQTNFNIGTSSEARKIKRAVRRAVRK
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgaaggtggaggtaaaataaaaagtaagcgcgggaactctacctcaaagccg
tatgagcggagaaagtctttgtttcgtcggatcaccgactcaatcaaggatgtcctgaga
ccttcatggctgcctaatgacgataatggcgatccctcaacctcaggcagacctggaacg
tcttcaggcgatgacggggaagaacagttcttgagtccaccccagtcaccatcccagctg
ttaggtcacaacagtcagggcctgaggccatcagaacgtctttaccctcagctgccccac
cctgattcctcccacgcccctggcaatgcctctgtcgcttggcaacagggggcgtctgga
tggcagggtcaaggtcagggcacgaggtcttctacctggggcaacaacgccaacactttt
gacaagtcgcagtttaccccgaactactttggacagaaacacatggctggtgccagacag
gctggcagcatgccagaaatcgcgccgtcaccaagaggtctgggcggaccagcccccatc
accccctctgcctcctcctccactcccactggtcacaggaggctggtcgtacctcagtca
ggcgtgtcgtcctcttcacagcgagatgatgggcagggcagagcgtctgctgggcccagt
tttcccccttctgcctctccttctttgaactctgaggataatccaacaaagcgacaacgg
ttgtggagtcctgaggtgttgagaagagggacctcgctttcagcaacacagcaaaggttg
tggagtcccgagagaaaagggagccttttacagcctgcagtgaaagacaaaccagctttt
aaaatctctgtcttcagttctcctagtctgaatgagtcatcgcacgagtcctccttctac
tcagggagaaccacatacggtggtgcttctgcttacagcaggcaaagtttcaacagctca
ctgccatatcagaattcactcccgttacggaagtcagtgaaggctaaaccattgaacaac
tcgggcaatgctgttctcagttcttctgccacgcaaatcttgaagacgctagaaaggctg
tcggatgcaaagagatctcgagcgaacgacactgaatcagagtccttgttgtctttcacg
ccttccagttacaggaaagcctccagaccattgcaaaccagtttgccctctcgctcactg
gagctgcctgtgcgaggtccccccacacaccagctcaacacccctgtggctgccagcatt
gccaagaaccgacagattatctcccttcctgctcgtcgccccaacccgcctgccgcgagc
gctacgtgtagcaagcaggacgacaggaggcaggatgtcgcccacatggatgaaggcgat
gaagatgttcgagttgtgagagtagaagagaagccagctcaggcaaggaccacgacgacg
agcagctcagctgttagcgaggggccgtcaagctccaggtctagcggcaagatgaaacat
cccaagagttatgacacgcgtcccaaagctgcacgagaggaggatgaggtggttgagatc
cccaaccttcgcaccgacttcacattgcccatcagcgctgcaggcttcagtctggggctc
cccaccgctccccctccctcctactcctcctcctactcctcctcctactcttcctctacc
ttctctgctacctacgcctccaccccttttaggtcatccggccactcggtcgccacaaaa
accagcacatccatgtccattcagagccccccttcagttaatgcgcatttcaccttctcc
tcccccatccagaagtctgcgcctggaaggtctggtttctctcctgcttctacagaggat
ttccagttcagcagcccgctgaaggtgtcggatagcatacaggccagtagctacaagtcg
gccatgacgtccactattgggtcgtcaccaatgagctcacagagtggcttcactcctgcc
gcctggggatccactgcacccaaacccaagtccagcttcacaggaaacgcccaggctagc
cctgtgaccagcagttatggtggcatcatgtcaccttcatcttcgtcagaccgccccgtc
atggcgactcctgagctcaagtttggcagtgtcatggatattcttggaggtgggaacaaa
agtcctgcgaaatattctccgtctgggtctggctttcaacctgcctcgcagctcaagcaa
gggagcgtgatggatatcttgggtggaaaatccaccacaacagccgcctccacattatcg
gggtcagggtctacaggcggtgacagtctgtttgccaagtttacagcaccggccggcacc
tgggactgtgacgcctgcatgctgcagaacaaacctgacgcggcaaagtgtgtcgcctgt
gagactcctaaacctgggaccaaacaaagtgcgccattcacagcatcagggtcagggtct
acaagcggtgacagtctgtttgccaagtttacagcaccggccggcacctgggactgtgac
gcctgcatgctgcagaacaaacctgacgcggcaaagtgtgtcgcctgtgagacgcccaaa
cctgggagtgctccagccaagccgtcggccccagcgagtgacttgatggccaagttccgg
ccgccacaggggtcgtgggaatgtgacgtgtgtatggtgcagaacactggtggtgacacc
aagtgtcttgcctgtgaaacgccaagacctggcacgcaggccacagggtcagtaccagca
ccagcagcaccagctccaggggtagtgggacccagtggggggttgattctctcttccatc
cccacatcctcttcaggcgcctcccccttcctctccgccggcacctccggcacagagtcc
tcaacaggcttcaaatttggagcacccccctcttcctcctccctcccagcggctgggggc
ttcatgtttggagcatccagttcttctgctgctaaggcgttcggtgcaacatccaaggat
tcatcggggactgctggcttcaagtttggaacgggggccgcaggaaccacagattcctca
acggaaaaatctaagtttgagacaagttctactggtgccaaggacacttccggcacagca
ggcttccagtttggaagcaaggacacctcaaactccaacagtgcctcttccaccgccggc
tttcagttcggagccaaagactccacagacactaacggtcccttgacctctgccgggtca
gcagtgaagttgggggccggtgcagactccaaactgacatcttcaacggccactggttct
ggctttcagtttggtgcaccttcggcccccagtggtggtggtagtggttttgtgtttggt
gcgcccagcaagacttccccggcacaggacagtgcaagctccacctcggcctctgcgctg
cctggggggttcagcttcaagactccatcagaggcagggggggctcaaacccagggcaaa
gactcaagtgccaagagcgttgataaattgacttcaccccaagagacaggcaatgagggg
aatgcccatagtttgttcactcctgtgtttggtgtgggcaaacctagtaacaacttctcc
atgggtgcggccccttcattggcgacaggggaagcaaactctgtgactggcggattttca
tttggggcgaccgccagcagggacagtgctgccccgtctgtgttcggctctggcctgaca
tctaaagtgaccttttctggcagtgacgattccaaggcagaaagtcgagacagttctgct
aaagcaccgtcactttctggcggtttcagctttgcagctgctgccaagaccaacaacgat
acttctgccaagccaggactcttctcctctttagcgccagactcgagcagtaaaaacggt
cccagctcctctgttgctgctcctgcttcctccggttcagcggggtttgcgttcggtggt
aacgccacaacagccagtccattcggctctggtgctcagcttggcgcaggagggtttggt
tccgccccctctgcagccaagccggtagtgaacggagaagtggccgccccaggaatgttc
gcctttggtcagcagacttcgacctccaccgctggtttttcctttgccactccagctgcc
aacaaggatggtgtggggaacgcacctgcaccggccaagttgcccttcgccttcggtggt
gcggattctggcaagtcttcggggaaacgtcgacttgacaatgatttgggcccaggagaa
gccaagaaaagcttgttcagcatgaccggggcgccctctttaggggaaggcgaaccattc
aagttcagtaacacggctcctgcagctggtggcagtggcatgttcaagtttggccaaccc
tcagatgggccagcagagaaagctcccaacatcacagcctttggcggccaggcctccggc
tttggcagtgctggaactccgggcggcttcagtttctccaaccctcagaccaatgccgcc
agtagtactggggcccctgctccgtccctttttggtgcgggaacaggaagcaccaacacg
gggcagttctctttcagtgtaggcgcagggtcacagagcaacgctgctgctgcttcgccc
tttggttccggtgcctcggctcctttggcttcttctcaaggtgcaggtggattcaacttt
gcaggagccacccagccatcttttaactttggtggcgccaacactgccgcacctgtcttc
gcctttggtgtaccttcaggtgaaccagccccagcacagccagctcccagtggaggcgtg
ttcgcattcggtcagacagcgccctctgccgacagcacctcctccttctctgcacccggc
cccaaccctgctcccaatgccatgggctttggggctgcacccgcacagaccaactttaac
attggaactagctcagaagcgaggaaaatcaagcgagccgtgcgacgagctgtgcgcaaa
tga
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