Littorina saxatilis: 138966839
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Entry
138966839 CDS
T10665
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
lsax Littorina saxatilis
Pathway
lsax03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lsax00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
138966839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lsax03021
]
138966839
Transcription machinery [BR:
lsax03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
138966839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
138966839
NCBI-ProteinID:
XP_070195296
LinkDB
All DBs
Position
LG5:30677266..30711341
Genome browser
AA seq
528 aa
AA seq
DB search
MAAKPGPSGMVPVGPSAAASNTTTQEYTVRVPLVSDRKKRVAMMRLPNRPPIDFSKSTDL
SIKMERENNFKEYKTANDIDMMPKFGAGSEFGRDQKEEARRKKYGIILKKYNPDEQPWHL
KIGSGKQAKKFRGVREGTISENTSYYIFTQCADGAFEAIPVEEWYNFTPMIRYKYLNAEE
AEEEFSRRDKTLNYFNIMLKKRVKNEDKDTELDEEEKAAKSKASKSGKKRREFMLTDMDD
WANISDDDEDIDEEDEDGDEKPRDDDKKGGKGKKGKANAKGKAKVKNSKQNSDDEAIEES
DDGDYDDKEVDYMSDSSSSGLSGADEKNKKYEEKGVAEEDGLRNILNSEDEEDEEENKEE
EDNEDEEKKDEKPAKEKKTGSESSSSSSGSDSDIDKDEKITSALLMQKEKGDKKKPNEKG
DAGSSSTNTTDSKSVKRKGDGDAPPSKKSKRDHSSYSGGSSSDGITEDAIRRYLQRKPMT
TKDLLQKFRSKKLNLTKEQMTHAIAQLLKRINPERTMINKKLYLSLKA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaaccgggaccatctggtatggttcctgtaggtccaagtgcagcagcaagt
aatacaacaacacaggagtacactgtcagggtgccacttgtcagtgatcgcaagaaaagg
gttgcgatgatgagattgcccaacaggcctccaattgacttttccaaatcaactgatctg
tccataaagatggagcgggagaacaacttcaaggagtacaagacggccaatgacattgac
atgatgccaaagtttggcgcgggcagcgagtttgggcgtgaccagaaagaagaagctaga
agaaaaaaatacggcatcattttgaagaagtacaaccccgatgaacaaccttggcatctg
aagatcggcagcggcaagcaggccaaaaagttccgaggggtgcgagaaggcacaatctct
gagaacacgtcctactacatcttcacccagtgtgccgacggcgcctttgaggccatccct
gtggaggagtggtacaacttcacgcccatgattcgctacaagtacctcaacgctgaggag
gcagaggaggagtttagcagaagagacaagacgctgaactacttcaacattatgttgaag
aaacgggtgaagaacgaggataaagacactgagttagatgaggaggaaaaggcagccaag
tccaaagcatcaaaatcagggaagaagaggagggagtttatgctaacagacatggatgac
tgggccaacatctcggacgatgacgaagacatagatgaggaagatgaagatggtgatgaa
aaacccagagatgatgacaagaaaggaggcaaagggaagaaaggcaaggcgaacgccaag
ggcaaagccaaggtgaaaaattccaaacagaactctgacgacgaggcaatcgaggagagc
gatgatggagactatgatgacaaagaagttgattacatgtctgacagtagcagtagtggg
ttatctggggcggacgagaaaaacaaaaagtacgaggagaaaggcgtggcagaggaggat
ggtctgcgaaatatcctcaactcggaggatgaagaggacgaggaggaaaacaaggaggaa
gaggacaatgaggacgaggagaaaaaagacgagaaacctgcaaaagaaaagaaaactgga
agtgaaagcagtagctcaagttcaggcagcgattcagatattgacaaagatgaaaaaatt
acctcagctcttcttatgcagaaggagaaaggagacaagaagaagcccaatgaaaaggga
gatgcagggagcagctctacaaacactactgattccaaatctgtgaagcgaaagggagac
ggagatgctccaccgtccaaaaagtccaagagagatcattcttcttattccggtggttca
tcaagcgacggcatcacagaggatgcaatcagacgttacctgcagaggaagcccatgacg
acgaaagacttgctgcaaaaattccgctccaaaaagctgaacctgacgaaagaacagatg
acacatgccattgcacagctgttgaaacgaatcaacccagagcgtactatgattaacaag
aagctgtatctgtccctcaaagcctaa
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